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Report for Sequence Feature Glyma18g32536

Feature Type:gene_model
Chromosome:Gm18
Start:37820889
stop:37821796
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma18g32536
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G65640AT Annotation by Michelle Graham. TAIR10: beta HLH protein 93 | chr5:26237137-26238904 FORWARD LENGTH=351 SoyBaseE_val: 6.00E-59ISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0003677GO-mf Annotation by Michelle Graham. GO Molecular Function: DNA binding SoyBaseN/AISS
GO:0003700GO-mf Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding transcription factor activity SoyBaseN/AISS
UniRef100_G7J450UniRef Annotation by Michelle Graham. Most informative UniRef hit: Transcription factor bHLH93 n=1 Tax=Medicago truncatula RepID=G7J450_MEDTR SoyBaseE_val: 3.00E-80ISS
UniRef100_I1JV18UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JV18_SOYBN SoyBaseE_val: 3.00E-88ISS

Expression Patterns of Glyma18g32536
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma18g32536 not represented in the dataset
Glyma18g32536 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma18g32536 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.18g156800 Wm82.a2.v1IGC As supplied by JGI

References for Glyma18g32536
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma18g32536
>Glyma18g32536.1   sequence type=CDS   gene model=Glyma18g32536   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGATAGAACATCTATACTTGGAGACACTATTGATTACATGAAAGAACTTCTGGAGAAGATCAACAATCTGCGGCAAGAAGTAGAAGTAGATTCAAACATGGCAGGCATTTTCAAAGATGTAAAACCAAATGAAATCCTAGTGAGAAATTCACCCAAGTTTGAGGTGGAGAGGAGTGTGGACACCCGAGTGGAAATTTGCTGTGTAGGGAAGCCAGGCTTGATACTATCTACTGTAAACACTCTGAAAGCATTAGGCCTAGAGATTCAACAATGTGTTATTAGCTGTTTCAATGATTTCACAATGCAGGCTTCATGCTCAGAGGAATCGGAGCAAAGGACGATGCTGAGTTTTGAAGACATAAAGCAAGCGTTGTTTAGAAGTGCAGGATATGGAGGAAGATGTTTATGA
Predicted protein sequences of Glyma18g32536
>Glyma18g32536.1   sequence type=predicted peptide   gene model=Glyma18g32536   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MDRTSILGDTIDYMKELLEKINNLRQEVEVDSNMAGIFKDVKPNEILVRNSPKFEVERSVDTRVEICCVGKPGLILSTVNTLKALGLEIQQCVISCFNDFTMQASCSEESEQRTMLSFEDIKQALFRSAGYGGRCL*






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