Glyma18g15599 - SoyBase

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Report for Sequence Feature Glyma18g15599

Feature Type:	gene_model
Chromosome:	Gm18
Start:	15816333
stop:	15819030
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma18g15599

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
PF01107	PFAM	Viral movement protein (MP)	JGI		ISS
UniRef100_I1KWU7	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KWU7_SOYBN	SoyBase	E_val: 1.00E-143	ISS
UniRef100_Q8H6Q8	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: CTV.20 n=1 Tax=Citrus trifoliata RepID=Q8H6Q8_PONTR	SoyBase	E_val: 1.00E-99	ISS

Expression Patterns of Glyma18g15599

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma18g15599 not represented in the dataset	Glyma18g15599 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma18g15599 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma18g15599

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma18g15599

Limit To All Plant Sequences

>Glyma18g15599.1   sequence type=CDS   gene model=Glyma18g15599   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AACCAGACCCAAGAGGTCGCCCCAAAACATAATCTCTTCGATGAGGAAGTCCGATTCGAAGATATTAACCAAAACATGGATGACTGGAACATTCCAGAAATCCCTCAGGATCAACTATACGTTCCTGAAACAATTAAAGACAAACACAACTTTGATTACATAATCAAAACAGTAGAAAACAATATTCCTCTAAGACAAGATATAGGGGAAGAATTTCATCTACTTTCAAAAAATTCAATTTATGAACATAGCCGTAAGTATAAATATCTACACATCGGTTGTGTACAAGTAGCCATCAAGCCCTTAATTGATATGGGCATAGATGCAGCAGTTTTAATGTGTCTAAGAGATATTAGGCATAATCAATTTGAAGACTCCCTAATTGGAACAGTCGAAACCAGCCTAGGACAAGGTCCAATATATTTTAATTGTTATCCAAACAAAACAGTGAGTCTGATGGACAAAAACATTCTTGACTCTCTGTTCTTAAACATCCACTTTCATGGCCTTGACATGAAAGAAGGATCAATCCCAGCAGCCTTAATTTATAGGATCCAGTACAAGGTCATGAATACTTGTGCATCTAGAGTTCTGTTAAAACCTCAAAAAGGAGAAACAACCTTGTTTATCACTGATATGACAAAGGCTAACGTGTCTCTCCCAAGAAAAATAAAATGGGATGAAGTAACTCTTCCCGAAAGATGGGTTATGGATAAGGCCACACCGTCTATTCCCCGACCCGCTCCAACCATAGAGCATATTAAGCAAGATAACTCCGGAAAGGTAGAAATAACCTTCAATAGGAGAAATTCTTTTACATCAAGAATAGAAGCCTCTAGGTCTGAATATGAGTCAGCCAGAAGGTCTTTTTCAGTTAGAACCCGTTCAATTCCAGTAGGACTAACCAGATCTGAGTCACATAACCAGTTCCCTACTGTAAACCTCCAAGGATTAGACACCACTTCAAGCATACCTAGAACAACTTACAACCAAGAACAAGAGGACGACCAAAACATTGATAAGGAAACCCTTAGGAAAGATTTTTATTCTCCGGAGAATGAACCTCAAAGGAGATGGTTTTTCCAACATTACAAGGGTACAAACAGAAAACAAATCCAAGACAAGTTCTATGAATTTGTCGAAAGAGTCAAAATTAATGTCCTTTTCTTTGATTGGTTTCATGCTTATGCCATCAGAAAGGATATAGATTACCCTTGGAAACAAGACATCATAGGTGATCCAACAACAAATGTCATAACAAATTGGCAAGTGAAGGATGGTGAGTTAATCCAATCGGAATTACCTCCCGCAACACAATATCAACTACCAAACATCAAAGACAGTAACAATAAACCTGTCATGGCAATTCCATTCAAGACAAAAGATGTCAACGAGGAAATAACCTCTAAAGACATTAAGAGCCTAATGGAACAGGCAAACTATACCAACAAATACTTACAAGCTTTAGGAGAAACCATAAAAACTAAGGTAGTTCCTAAACAAAAATCAATTGAGGAAACTTCGCCAAAAATCCCCATTGAAAAACCATTATTCAAACCTTTCAAAGTTAGTGAGAAGGCTAAAAGAAAAATTAGGGAACTTAGAAAAACTAAATCCTTAATTGAAGGCGTAGGTGACAACCATAGTGAATTACTAAACAAGATTGGTAGTTTACTTAAAGTCATTCCAGATACCCCCCAAGCCTCAGAAAATACTTCCAAAATGGTAACAAGAAATGCACAAACGGAGTATAACATCATGAATACACTCCAACATATGACCATGGTGGCTACGGCTTACCAAACCTCCCATGAATGTTCAGAAGAGACCATTATAGATATCTTAGTGGCAGGATTTTCTGGACAATTAAAAGGATGGTGGGATAATTATCTCACTAACGAAGAGAAATCAAAAATTTACAGCGCAGTTAAGACGGATCTCAATGGAAAAGTCATTACTAATGACGATGATAAAGAGATTCCTGACGCTGTTAACACATTAATTTTTACAATAGCCCAACATTTCATTGGAGACCCATCCTTGTGGAAAGATAGGTCTGCAGAATTATTGTCAAATCTTAAGTGTAGAACCTTAGCGGATTTTAGGTGGTATAGAGATACTTTCCTAACTAGGGTTTACACAAGAGAAGATAGTCAACAACCTTTTTGGAAAGAAAAATTTCTAGCTGATATTCCATATGAAAGTTTAAGCTATGGTCAACTAATTTCTTACGTCCAAAAGGTAGCCTTAAAAATTTGTCAGGATGACAAAATTCAGAGGCAATTAGCCAAAGAAAAGGCTCAAACAAAGAGAGATTTAGGTTCTTTCTGCGAACAATTT

Predicted protein sequences of Glyma18g15599

Limit To All Plant Sequences

>Glyma18g15599.1   sequence type=predicted peptide   gene model=Glyma18g15599   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
NQTQEVAPKHNLFDEEVRFEDINQNMDDWNIPEIPQDQLYVPETIKDKHNFDYIIKTVENNIPLRQDIGEEFHLLSKNSIYEHSRKYKYLHIGCVQVAIKPLIDMGIDAAVLMCLRDIRHNQFEDSLIGTVETSLGQGPIYFNCYPNKTVSLMDKNILDSLFLNIHFHGLDMKEGSIPAALIYRIQYKVMNTCASRVLLKPQKGETTLFITDMTKANVSLPRKIKWDEVTLPERWVMDKATPSIPRPAPTIEHIKQDNSGKVEITFNRRNSFTSRIEASRSEYESARRSFSVRTRSIPVGLTRSESHNQFPTVNLQGLDTTSSIPRTTYNQEQEDDQNIDKETLRKDFYSPENEPQRRWFFQHYKGTNRKQIQDKFYEFVERVKINVLFFDWFHAYAIRKDIDYPWKQDIIGDPTTNVITNWQVKDGELIQSELPPATQYQLPNIKDSNNKPVMAIPFKTKDVNEEITSKDIKSLMEQANYTNKYLQALGETIKTKVVPKQKSIEETSPKIPIEKPLFKPFKVSEKAKRKIRELRKTKSLIEGVGDNHSELLNKIGSLLKVIPDTPQASENTSKMVTRNAQTEYNIMNTLQHMTMVATAYQTSHECSEETIIDILVAGFSGQLKGWWDNYLTNEEKSKIYSAVKTDLNGKVITNDDDKEIPDAVNTLIFTIAQHFIGDPSLWKDRSAELLSNLKCRTLADFRWYRDTFLTRVYTREDSQQPFWKEKFLADIPYESLSYGQLISYVQKVALKICQDDKIQRQLAKEKAQTKRDLGSFCEQF

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