Report for Sequence Feature Glyma18g15150
Feature Type: gene_model
Chromosome: Gm18
Start: 15170217
stop: 15175476
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma18g15150
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G10940 AT
Annotation by Michelle Graham. TAIR10: Protein kinase superfamily protein | chr1:3656050-3658170 REVERSE LENGTH=363
SoyBase E_val: 4.00E-43 ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0006511 GO-bp
Annotation by Michelle Graham. GO Biological Process: ubiquitin-dependent protein catabolic process
SoyBase N/A ISS
GO:0006970 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to osmotic stress
SoyBase N/A ISS
GO:0009651 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to salt stress
SoyBase N/A ISS
GO:0009737 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to abscisic acid stimulus
SoyBase N/A ISS
GO:0042752 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of circadian rhythm
SoyBase N/A ISS
GO:0080022 GO-bp
Annotation by Michelle Graham. GO Biological Process: primary root development
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0005829 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytosol
SoyBase N/A ISS
GO:0016020 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: membrane
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0005515 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein binding
SoyBase N/A ISS
GO:0016301 GO-mf
Annotation by Michelle Graham. GO Molecular Function: kinase activity
SoyBase N/A ISS
GO:0070300 GO-mf
Annotation by Michelle Graham. GO Molecular Function: phosphatidic acid binding
SoyBase N/A ISS
PTHR24343 Panther
SERINE/THREONINE KINASE
JGI ISS
PTHR24343:SF58 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00069 PFAM
Protein kinase domain
JGI ISS
UniRef100_G7LGB9 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Serine/threonine protein kinase SAPK3 n=1 Tax=Medicago truncatula RepID=G7LGB9_MEDTR
SoyBase E_val: 4.00E-41 ISS
UniRef100_I1N154 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1N154_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma18g15150
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma18g15150 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
References for Glyma18g15150
Coding sequences of Glyma18g15150
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma18g15150.1 sequence type=CDS gene model=Glyma18g15150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAGGCAGACTCATCGAGCGCGTCAGGGCCAAGAGGAACAACATCGGACGGAGGCAGAAAAATTGAAAAGGATATACAAAGACGGTCATTAGTAAAACCCGTCGTTGTCTTAGTTTCATGTAATTACAATATTGCCACCGAAGAACATTCTAAGACGGTTGTTTACAACCGCCTTAGAATGTGCGACGTTAAATACAAAAAAAATGTAAGAGAAATCATTAATCACAGGTCTTTAAGACATCCTAACATTATCAGGTTTAAAAAGGTTGAATATGCATCTGGTGGAGAACTATTTGAGAAAACCTGCAATTGGGGGCATTTTAATGAGGATGAGGTCCTTATTTCCTGTGTAACTATTAACCCATTGTTATGCCACATGCTCGTTTCTTCCTTCAACAACTCATATTGGGGTCAGCTATTGTCATGCAATGAATATAGTATAGGCAATGTGTCAATCTTGAGTATTATGTATGATGTGATGTATGAGTCTTATGACCTGAAGTTGGAAAACAATTTGTTGGATGGAAGACCAGCACTTCATTTGAAGATATGTGATTTTGGATACTCCAAGTTTGTGCTTGATCCATTCATTAAAATTGGGTTTATCCCAAGTCTAAGTAATAGAGTGCTAGACCAGAATGTAGGCTTGAATTCTGAAATGCTCAGGATTTGGAAAGTGTATGTTTGTAAGAAGAGGATTAGGAGAATGATAAATGTCTGGTCATGTGGAGTAACCTTATTTGTGATGCTAATGGGATCATATCCTTTTGAAGATCCTAATGATCCAAAGGATTTCCAGAAGACAATTCAACATCTGGTTGCAGGGTTCTCAATGTCATATAAATCAGATTGTGCATGTAGGCAATTAATAAAAAGGCATTGTAAGACAATTCTCCAAAAAATTATCTTAGAAAGTCTACTTTCTAAGATGGTTTTAGAGAAAACCGTCTTAGAATCCACAATTTTTTTAAAAAAAGATATTATAAAACAGTTTTTTAGAAAGCTATTTTAA
Predicted protein sequences of Glyma18g15150
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma18g15150.1 sequence type=predicted peptide gene model=Glyma18g15150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEADSSSASGPRGTTSDGGRKIEKDIQRRSLVKPVVVLVSCNYNIATEEHSKTVVYNRLRMCDVKYKKNVREIINHRSLRHPNIIRFKKVEYASGGELFEKTCNWGHFNEDEVLISCVTINPLLCHMLVSSFNNSYWGQLLSCNEYSIGNVSILSIMYDVMYESYDLKLENNLLDGRPALHLKICDFGYSKFVLDPFIKIGFIPSLSNRVLDQNVGLNSEMLRIWKVYVCKKRIRRMINVWSCGVTLFVMLMGSYPFEDPNDPKDFQKTIQHLVAGFSMSYKSDCACRQLIKRHCKTILQKIILESLLSKMVLEKTVLESTIFLKKDIIKQFFRKLF*