Report for Sequence Feature Glyma18g15050
Feature Type: gene_model
Chromosome: Gm18
Start: 15079175
stop: 15082211
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma18g15050
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G05410 AT
Annotation by Michelle Graham. TAIR10: Protein of unknown function (DUF1423) | chr1:1585504-1587268 REVERSE LENGTH=471
SoyBase E_val: 1.00E-121 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
PF07227 PFAM
Protein of unknown function (DUF1423)
JGI ISS
UniRef100_G7K3N6 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Calmodulin protein kinase n=1 Tax=Medicago truncatula RepID=G7K3N6_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1N151 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1N151_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma18g15050
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma18g15050 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.18g119500 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma18g15050
Coding sequences of Glyma18g15050
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma18g15050.1 sequence type=CDS gene model=Glyma18g15050 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAGATGGAGATGGAGATGGAGATGGAGGAGAATAATGGATTATTGAATTTACAGGCAGTGGCACCGGAAATGTCCGGCGAGGGATTTCCATATGCGCCGGAAAATTGGCCGGAAGAGGGTGACATTTGGGGATGGAGAACTGGGCGGAGAATTGTCGCAAATCGTTCCCGCTTTCAGGATCGGTATCTGTATCTGCCAAATCGACTAATCCGTGCCTTGAAAGAGGAGAAGGAGAAGGAGAACCCAGGGTCAGGGGCTGACTCAGGCCCAAGTTCAAGCTCAATCCGAAGGCAACAGCACATCTTTGCTAGCAAGCTTGCTGTTGAACGCTACATCAAGACACATTTTCCTGATGCGGATATTGATGCCTTTTTTGCTTCCTTCTCCTGGAAGATTCCCGCTCTACGATCCAATGGCAATGCAGTTCCTGTAGCTGCTGTACCTCTTCAACAGATAGCACAAGAAGCATATGACTCCGACTCTGAGGGCGTTGTCAAGTGTAAAGCAAGAAATAAGAAGTGCACAAGTCTGGTGTTAGAAGAAATAGAAAAATATTCACCGGCCATGCCTTGTGATATCTGCTGTTCTGAACCTGGGTTTTGCCGTGATTGTTGTTGCATTCTTTGTTGCAAAACTGTTTCTTCAGCTTATGGTGGCTATAATTATATCAAGTGCCAAGTGAACGTAGGTGGGGGCATCTGTGGCCATGTTGCTCATATGGAATGTGCTCTTCGATGTCTATTGGCTGGCAAAGTTGGAGGAAGTATTGGGCTAGATGCCCAGTACCACTGCCGACGCTGTGATGGGAGGACTGATATGATTTCGCATGTTAATAATCTTATACAAACATGTAGAGCTGCTGATTTGGATGCTGAAATTCGGAAGAAGATTTTGAATCTTGGTGCTTGTCTCTTGCGTGGTTCACAGAAACCTGTTGCAAAGGAGCTGCTGTGTCGTATTGAATTGGCCATCTCAAAGCTTAAATGTGGAACTAATCTTGAAGATATCTGGAAGGAGGATTACAGTTTTGTAGCTCATTCTGCAGATAACGGCAATGATGTGATGGAAGTTATGGTCTATGATGACCCTTTTGAAGTTAGGACAGGGTTGGAATCTTATGATTTTCTACCTCGTTCATTAAAACTTGAGTCTGAAGTTGATCAGGTTCTCCAGGCTCTTAGAAAGTCACAGGAGCTTGAATATAAGGTGGCAGAAGAAACACTTCAAGACCAAAAGACTTACTTAAAAAGATTGTATCAGCAACTGGACCGTGAGAAGTATGAATTGGCTTGTCAAAACTCATCTACCTCAGATGTCTCGTCTAGTGCTGTAAGAGAAAGAAAGAAACAGATAAGACGGGAGGTGGCAAAATTTGAAATCATGAAAAAAGTTGCCAATGGTTTTGGCAGGACATCCAATGATATTGTAAAGGAACACTTTGGCTTGAAAGTGATAGACTGA
Predicted protein sequences of Glyma18g15050
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma18g15050.1 sequence type=predicted peptide gene model=Glyma18g15050 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEMEMEMEMEENNGLLNLQAVAPEMSGEGFPYAPENWPEEGDIWGWRTGRRIVANRSRFQDRYLYLPNRLIRALKEEKEKENPGSGADSGPSSSSIRRQQHIFASKLAVERYIKTHFPDADIDAFFASFSWKIPALRSNGNAVPVAAVPLQQIAQEAYDSDSEGVVKCKARNKKCTSLVLEEIEKYSPAMPCDICCSEPGFCRDCCCILCCKTVSSAYGGYNYIKCQVNVGGGICGHVAHMECALRCLLAGKVGGSIGLDAQYHCRRCDGRTDMISHVNNLIQTCRAADLDAEIRKKILNLGACLLRGSQKPVAKELLCRIELAISKLKCGTNLEDIWKEDYSFVAHSADNGNDVMEVMVYDDPFEVRTGLESYDFLPRSLKLESEVDQVLQALRKSQELEYKVAEETLQDQKTYLKRLYQQLDREKYELACQNSSTSDVSSSAVRERKKQIRREVAKFEIMKKVANGFGRTSNDIVKEHFGLKVID*