Report for Sequence Feature Glyma18g14510
Feature Type: gene_model
Chromosome: Gm18
Start: 14341069
stop: 14345769
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma18g14510
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G06690 AT
Annotation by Michelle Graham. TAIR10: NAD(P)-linked oxidoreductase superfamily protein | chr1:2049742-2052039 REVERSE LENGTH=377
SoyBase E_val: 0 ISS
GO:0055114 GO-bp
Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0009535 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast thylakoid membrane
SoyBase N/A ISS
GO:0009941 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast envelope
SoyBase N/A ISS
GO:0010287 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plastoglobule
SoyBase N/A ISS
GO:0004033 GO-mf
Annotation by Michelle Graham. GO Molecular Function: aldo-keto reductase (NADP) activity
SoyBase N/A ISS
GO:0016491 GO-mf
Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity
SoyBase N/A ISS
KOG1575
KOG
Voltage-gated shaker-like K+ channel, subunit beta/KCNAB
JGI ISS
PTHR11732 Panther
ALDO/KETO REDUCTASE
JGI ISS
PTHR11732:SF88 Panther
ALDO-KETO REDUCTASE
JGI ISS
PF00248 PFAM
Aldo/keto reductase family
JGI ISS
UniRef100_B9S6H0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Aldo/keto reductase, putative n=1 Tax=Ricinus communis RepID=B9S6H0_RICCO
SoyBase E_val: 0 ISS
UniRef100_UPI000233E571 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233E571 related cluster n=1 Tax=unknown RepID=UPI000233E571
SoyBase E_val: 0 ISS
Expression Patterns of Glyma18g14510
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma18g14510
Paralog Evidence Comments
Glyma08g41630 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma18g14510 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.18g115500 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma18g14510
Coding sequences of Glyma18g14510
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma18g14510.2 sequence type=CDS gene model=Glyma18g14510 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCTCTTCACATAAGCAGTGGTTGTTTTACTGTGATGTGTAATTCAAGAGTTCACAGAATAAGAGCTGTTGCTTCAGAGGGTTCTGCTACTCTTAATACAGTGGTGGAGGAGAAGGTGAAGTTGGGTGGCTCTGATTTGAAGGTGTCAGGGGTTGGAATTGGAGCTTGGTCTTGGGGTGATACCACTTACTGGAACAATTTTGAATGGAATGATAGGAATGAGAAGGCTGCTAGAGCTGCTTTCAATACCAGTATTGATGGAGGTCTAACCTTTTTTGACACTGCTGAAGTCTATGGCTCTGGGCTTGCTTTAGGAGCCATAAATTCTGAGGTTCTTCTTGGAAGATATATTAAGGAAAGAAAAGAAAAGGATCCAGAGGTTGAGATTGAAGTAGCAACCAAGTTTGCTGCACTGCCGTGGAGATTTGGCCGTCAAAGTGTTCTCAATGCCCTTAAAGATTCCCTTTGTCGACTAGGACTGACTTCAGTGGATCTTTATCAGCTACATTGGCCTGGAGTTTGGGGAAATGAAGGGTATATTGATGGTCTGGGAGATGCTGTTGAGAAGGGACTTGTGAAGGCCGTTGGAGTTTCAAACTATAGTGAGAAGCGACTCCGTGAGGCTTATGAGAAGCTTAAGAAGAGAGGTATTCCATTAGCTACAAACCAAGTAAACTACAGCCTCATCTACCGGGCCCCTGAAGAAAATGGTGTAAAGGCTGCCTGTGATGAACTTGGGATAACAATAATTGCATATTCACCAATTGCTCAAGGTGCTCTCACTGGAAAGTATACTCCTGATAAACCACCAAGTGGGCCAAGGGGCAGAATTTATACTCCAGAATTCCTAACAAAGCTCCAACCTTTGCTGAACAAGATCAGTGAAATAGGGGAGAAGTATGATAAAACTCCAACACAGGTATCCCTGAACTGGCTGGTAGCACAAGGCAATGTTGTGCCAATTCCAGGAGCCAAGACAGCAGAACAAGCTGAGGAATTCAGAGGTGCACTTGGCTGGAGACTAACTGATGAAGAGGTAGCTGAGCTGCGTAGTGTGGCTTCAGAAATTAAACCTGTTATAGGTTTTCCAGTTGAAAAACTCTAG
Predicted protein sequences of Glyma18g14510
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma18g14510.2 sequence type=predicted peptide gene model=Glyma18g14510 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MALHISSGCFTVMCNSRVHRIRAVASEGSATLNTVVEEKVKLGGSDLKVSGVGIGAWSWGDTTYWNNFEWNDRNEKAARAAFNTSIDGGLTFFDTAEVYGSGLALGAINSEVLLGRYIKERKEKDPEVEIEVATKFAALPWRFGRQSVLNALKDSLCRLGLTSVDLYQLHWPGVWGNEGYIDGLGDAVEKGLVKAVGVSNYSEKRLREAYEKLKKRGIPLATNQVNYSLIYRAPEENGVKAACDELGITIIAYSPIAQGALTGKYTPDKPPSGPRGRIYTPEFLTKLQPLLNKISEIGEKYDKTPTQVSLNWLVAQGNVVPIPGAKTAEQAEEFRGALGWRLTDEEVAELRSVASEIKPVIGFPVEKL*