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Report for Sequence Feature Glyma18g14130

Feature Type:gene_model
Chromosome:Gm18
Start:13654148
stop:13654465
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma18g14130
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G02370AT Annotation by Michelle Graham. TAIR10: Protein of unknown function, DUF538 | chr4:1042458-1042961 FORWARD LENGTH=167 SoyBaseE_val: 5.00E-33ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0048767GO-bp Annotation by Michelle Graham. GO Biological Process: root hair elongation SoyBaseN/AISS
GO:0005773GO-cc Annotation by Michelle Graham. GO Cellular Compartment: vacuole SoyBaseN/AISS
GO:0005774GO-cc Annotation by Michelle Graham. GO Cellular Compartment: vacuolar membrane SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
PF04398PFAM Protein of unknown function, DUF538 JGI ISS
UniRef100_I1N119UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1N119_SOYBN SoyBaseE_val: 2.00E-57ISS
UniRef100_O81296UniRef Annotation by Michelle Graham. Most informative UniRef hit: AT4g02370 protein n=1 Tax=Arabidopsis thaliana RepID=O81296_ARATH SoyBaseE_val: 2.00E-30ISS

Expression Patterns of Glyma18g14130
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma18g14130 not represented in the dataset
Glyma18g14130 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma18g14130 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.18g113900 Wm82.a2.v1IGC As supplied by JGI

References for Glyma18g14130
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma18g14130
>Glyma18g14130.2   sequence type=CDS   gene model=Glyma18g14130   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGTACGGGTTCCCGGTGGGTCTTCTTCCCAAGGGAGCCATAGGGTATTCACTTAACAAAGTCAGCGGTGAGTTCGCAGTGTATTTCCAAGGAGTGTGCAGCTTCGACATAGAGTCCTACATGTTCAAGTACAAATCCACCATCACGGGTGTCGTCTCCAAGGGTGTCACCGTCAAAATCTTGCTCCTTTGGCTCAACATCGTCGAGGTCTCTCGTCAGGGGAATGATATTTACTTCTCTGTCGGAATCTCTTCCGCTAATTTTGGCATTGAGAATTTCCTCGAGAGCCCCTAG
Predicted protein sequences of Glyma18g14130
>Glyma18g14130.2   sequence type=predicted peptide   gene model=Glyma18g14130   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEYGFPVGLLPKGAIGYSLNKVSGEFAVYFQGVCSFDIESYMFKYKSTITGVVSKGVTVKILLLWLNIVEVSRQGNDIYFSVGISSANFGIENFLESP*






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