Report for Sequence Feature Glyma18g10760
Feature Type: gene_model
Chromosome: Gm18
Start: 9611343
stop: 9612351
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma18g10760
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G27670 AT
Annotation by Michelle Graham. TAIR10: heat shock protein 21 | chr4:13819048-13819895 REVERSE LENGTH=227
SoyBase E_val: 3.00E-36 ISS
GO:0006457 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein folding
SoyBase N/A ISS
GO:0009408 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to heat
SoyBase N/A ISS
GO:0009644 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to high light intensity
SoyBase N/A ISS
GO:0010286 GO-bp
Annotation by Michelle Graham. GO Biological Process: heat acclimation
SoyBase N/A ISS
GO:0042542 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to hydrogen peroxide
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
PTHR11527 Panther
SMALL HEAT-SHOCK PROTEIN (HSP20) FAMILY
JGI ISS
PTHR11527:SF18 Panther
HEAT SHOCK PROTEIN 26
JGI ISS
PF00011 PFAM
Hsp20/alpha crystallin family
JGI ISS
UniRef100_G7J004 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Small heat shock protein n=1 Tax=Medicago truncatula RepID=G7J004_MEDTR
SoyBase E_val: 3.00E-115 ISS
UniRef100_UPI000233E291 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233E291 related cluster n=1 Tax=unknown RepID=UPI000233E291
SoyBase E_val: 5.00E-170 ISS
Proteins Associated with Glyma18g10760
Locus Gene Symbol Protein Name
HSP21 HEAT SHOCK PROTEIN 21
Expression Patterns of Glyma18g10760
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma18g10760 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.18g094600 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma18g10760
Coding sequences of Glyma18g10760
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma18g10760.2 sequence type=CDS gene model=Glyma18g10760 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCTTCAACTGTAGTACCATATATGAGTTTCTATGCCCACACTTCATCTGGCAGAATGAACAAATTTTCCAATGTCAAATTGCTACCAGTGTCAAGCACAAGGAATAGAACTTTCAGCTACAGTGTAAAGGCTATGGCAGGAGGTGAAGCGAGTTTGCAGAAGTCAAATCAGCACCAGCAGCAAGTGCAGCCAAAGATGAAGGTGCCACAAGGTTCACCTAAAGTGCTGCTGAACCAGTTTCCTGTAGCAAGGACTGTGCAGCAAATGATGGATACAATGGAGAGGATGGGGGAGGATCTCTTGGTTTATGGTAGAACTTCACCTGTGATAGTTGCGGGAGATGATGAATACAGTAAGGGGAAGATTCCTTGGGCAATAAAGGAAGGCCAAAAAGATTACAAAATGAGATTCAACATGCCAGGAATGAACAAGAATGATGTCAAGGTATGGGTAGAAGAGAACATGCTGGTGGTGAAGGCAGAGAAGGCACTCGAAGAGAATCATGAAGGTCGAGCAAATGGCAATGAAGACTGGCCTGCCAATAGCTATGGTAGATATAACCACAGGATAGCCCTCCCAGAAAATATTGAGTTTGATAAAATTAAGGCACAGGTCAAAGATGGGATTCTTTATGTAACAATTCCTAAATCCAGCACCTCTGCAAAAATAATTGGCATAGATGTACAGTAA
Predicted protein sequences of Glyma18g10760
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma18g10760.2 sequence type=predicted peptide gene model=Glyma18g10760 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MASTVVPYMSFYAHTSSGRMNKFSNVKLLPVSSTRNRTFSYSVKAMAGGEASLQKSNQHQQQVQPKMKVPQGSPKVLLNQFPVARTVQQMMDTMERMGEDLLVYGRTSPVIVAGDDEYSKGKIPWAIKEGQKDYKMRFNMPGMNKNDVKVWVEENMLVVKAEKALEENHEGRANGNEDWPANSYGRYNHRIALPENIEFDKIKAQVKDGILYVTIPKSSTSAKIIGIDVQ*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
