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Report for Sequence Feature Glyma18g04351

Feature Type:gene_model
Chromosome:Gm18
Start:3098772
stop:3100010
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma18g04351
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G06130AT Annotation by Michelle Graham. TAIR10: Heavy metal transport/detoxification superfamily protein | chr3:1853048-1854673 REVERSE LENGTH=473 SoyBaseE_val: 3.00E-10ISS
GO:0030001GO-bp Annotation by Michelle Graham. GO Biological Process: metal ion transport SoyBaseN/AISS
GO:0005618GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cell wall SoyBaseN/AISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0046872GO-mf Annotation by Michelle Graham. GO Molecular Function: metal ion binding SoyBaseN/AISS
PTHR22814Panther COPPER TRANSPORT PROTEIN ATOX1-RELATED JGI ISS
PTHR22814:SF16Panther CHLOROPLAST-TARGETED COPPER CHAPERONE JGI ISS
UniRef100_I1MZC8UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1MZC8_SOYBN SoyBaseE_val: 8.00E-81ISS
UniRef100_Q9M8K5UniRef Annotation by Michelle Graham. Most informative UniRef hit: AT3g06130/F28L1_7 n=1 Tax=Arabidopsis thaliana RepID=Q9M8K5_ARATH SoyBaseE_val: 2.00E-07ISS

Expression Patterns of Glyma18g04351
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma18g04351 not represented in the dataset
Glyma18g04351 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma18g04351 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma18g04351
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma18g04351
>Glyma18g04351.1   sequence type=CDS   gene model=Glyma18g04351   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCTGAGGAAGAGGAACAGTAAGAATGGTGTCAGAGAGGGGGGGAAACAAAACAGAAGAAAATTTAAAAGTGTCTGTAAAGTAGACATTAATGCAGAAGAGCAAACGGCAATTGTCACAGGCATTGTCAACCCATCCACTTTGGTCCAGAAGTTGGCCAAATTTGGCAAGCATGCAGAGATATGGGATGCAGGATACAACGGTGATCAGAACAATAACCAAGCTCAATTAATAAATAATCACAGTGACTATGAAAATCAGTATATGATTCCCCCCTTTGGCGAAAATCACTGGGGACCCCAATGGGGTTTTAATGCTGGCTTAGAGAATAGTGAAACTATTTATGCTGGCTTAGAGAACCAAGAATGGGCACGTAACTTCCCTGGAGAGTCATCAACTAGCAAATATGGTCATCAACCATCTCCTATGGCCAACATACATGAATATCATCATGAATTCCATCCATCAAATATGATGCAGTTTTCTTCCCATATCATGGACCTGAACAATTAA
Predicted protein sequences of Glyma18g04351
>Glyma18g04351.1   sequence type=predicted peptide   gene model=Glyma18g04351   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLRKRNSKNGVREGGKQNRRKFKSVCKVDINAEEQTAIVTGIVNPSTLVQKLAKFGKHAEIWDAGYNGDQNNNQAQLINNHSDYENQYMIPPFGENHWGPQWGFNAGLENSETIYAGLENQEWARNFPGESSTSKYGHQPSPMANIHEYHHEFHPSNMMQFSSHIMDLNN*






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