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Report for Sequence Feature Glyma17g37520

Feature Type:gene_model
Chromosome:Gm17
Start:41255407
stop:41257909
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma17g37520
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G31500AT Annotation by Michelle Graham. TAIR10: cytochrome P450, family 83, subfamily B, polypeptide 1 | chr4:15273677-15275271 REVERSE LENGTH=499 SoyBaseE_val: 1.00E-148ISS
GO:0000096GO-bp Annotation by Michelle Graham. GO Biological Process: sulfur amino acid metabolic process SoyBaseN/AISS
GO:0000162GO-bp Annotation by Michelle Graham. GO Biological Process: tryptophan biosynthetic process SoyBaseN/AISS
GO:0006520GO-bp Annotation by Michelle Graham. GO Biological Process: cellular amino acid metabolic process SoyBaseN/AISS
GO:0006546GO-bp Annotation by Michelle Graham. GO Biological Process: glycine catabolic process SoyBaseN/AISS
GO:0006569GO-bp Annotation by Michelle Graham. GO Biological Process: tryptophan catabolic process SoyBaseN/AISS
GO:0006636GO-bp Annotation by Michelle Graham. GO Biological Process: unsaturated fatty acid biosynthetic process SoyBaseN/AISS
GO:0006733GO-bp Annotation by Michelle Graham. GO Biological Process: oxidoreduction coenzyme metabolic process SoyBaseN/AISS
GO:0006766GO-bp Annotation by Michelle Graham. GO Biological Process: vitamin metabolic process SoyBaseN/AISS
GO:0008652GO-bp Annotation by Michelle Graham. GO Biological Process: cellular amino acid biosynthetic process SoyBaseN/AISS
GO:0009072GO-bp Annotation by Michelle Graham. GO Biological Process: aromatic amino acid family metabolic process SoyBaseN/AISS
GO:0009106GO-bp Annotation by Michelle Graham. GO Biological Process: lipoate metabolic process SoyBaseN/AISS
GO:0009108GO-bp Annotation by Michelle Graham. GO Biological Process: coenzyme biosynthetic process SoyBaseN/AISS
GO:0009117GO-bp Annotation by Michelle Graham. GO Biological Process: nucleotide metabolic process SoyBaseN/AISS
GO:0009641GO-bp Annotation by Michelle Graham. GO Biological Process: shade avoidance SoyBaseN/AISS
GO:0009682GO-bp Annotation by Michelle Graham. GO Biological Process: induced systemic resistance SoyBaseN/AISS
GO:0009684GO-bp Annotation by Michelle Graham. GO Biological Process: indoleacetic acid biosynthetic process SoyBaseN/AISS
GO:0009695GO-bp Annotation by Michelle Graham. GO Biological Process: jasmonic acid biosynthetic process SoyBaseN/AISS
GO:0009759GO-bp Annotation by Michelle Graham. GO Biological Process: indole glucosinolate biosynthetic process SoyBaseN/AISS
GO:0010114GO-bp Annotation by Michelle Graham. GO Biological Process: response to red light SoyBaseN/AISS
GO:0019288GO-bp Annotation by Michelle Graham. GO Biological Process: isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway SoyBaseN/AISS
GO:0019748GO-bp Annotation by Michelle Graham. GO Biological Process: secondary metabolic process SoyBaseN/AISS
GO:0019761GO-bp Annotation by Michelle Graham. GO Biological Process: glucosinolate biosynthetic process SoyBaseN/AISS
GO:0042742GO-bp Annotation by Michelle Graham. GO Biological Process: defense response to bacterium SoyBaseN/AISS
GO:0044272GO-bp Annotation by Michelle Graham. GO Biological Process: sulfur compound biosynthetic process SoyBaseN/AISS
GO:0048830GO-bp Annotation by Michelle Graham. GO Biological Process: adventitious root development SoyBaseN/AISS
GO:0052544GO-bp Annotation by Michelle Graham. GO Biological Process: defense response by callose deposition in cell wall SoyBaseN/AISS
GO:0055114GO-bp Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process SoyBaseN/AISS
GO:0005739GO-cc Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion SoyBaseN/AISS
GO:0005783GO-cc Annotation by Michelle Graham. GO Cellular Compartment: endoplasmic reticulum SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0016020GO-cc Annotation by Michelle Graham. GO Cellular Compartment: membrane SoyBaseN/AISS
GO:0005506GO-mf Annotation by Michelle Graham. GO Molecular Function: iron ion binding SoyBaseN/AISS
GO:0009055GO-mf Annotation by Michelle Graham. GO Molecular Function: electron carrier activity SoyBaseN/AISS
GO:0016705GO-mf Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen SoyBaseN/AISS
GO:0016709GO-mf Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen SoyBaseN/AISS
GO:0019825GO-mf Annotation by Michelle Graham. GO Molecular Function: oxygen binding SoyBaseN/AISS
GO:0020037GO-mf Annotation by Michelle Graham. GO Molecular Function: heme binding SoyBaseN/AISS
KOG0156 KOG Cytochrome P450 CYP2 subfamily JGI ISS
PTHR24298Panther FAMILY NOT NAMED JGI ISS
PTHR24298:SF44Panther JGI ISS
PF00067PFAM Cytochrome P450 JGI ISS
UniRef100_O48924UniRef Annotation by Michelle Graham. Most informative UniRef hit: CYP83D1p (Fragment) n=1 Tax=Glycine max RepID=O48924_SOYBN SoyBaseE_val: 0ISS
UniRef100_UPI000189D5C7UniRef Annotation by Michelle Graham. Best UniRef hit: UPI000189D5C7 related cluster n=1 Tax=unknown RepID=UPI000189D5C7 SoyBaseE_val: 0ISS

Expression Patterns of Glyma17g37520
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma17g37520 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.17g255900 Wm82.a2.v1IGC As supplied by JGI

References for Glyma17g37520
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma17g37520
>Glyma17g37520.1   sequence type=CDS   gene model=Glyma17g37520   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGTATCCTTGTTCTTCTTTCTCTATTGTCTATAGTCATCTCCATTGTTCTCTTCATTACCCACACACACAAAAGAAACAACACTCCAAGAGGACCACCAGGTCCTCCACCTCTTCCTCTCATCGGCAACCTTCACCAACTCCACAACTCATCCCCACATCTCTGCCTATGGCAACTCGCCAAACTCCACGGTCCTCTCATGTCGTTTCGCCTCGGCGCCGTGCAAACCGTCGTGGTTTCATCGGCCAGAATCGCCGAACAAATCTTGAAAACCCACGACCTCAACTTCGCTTCCAGGCCTCTCTTCGTGGGCCCGAGAAAGCTCTCTTACGACGGGTTGGACATGGGCTTCGCACCGTACGGCCCGTACTGGAGAGAAATGAAGAAACTCTGCATCGTTCACCTCTTCAGCGCGCAACGCGTTCGGTCCTTTCGACCAATTCGAGAGAACGAGGTTGCAAAAATGGTTCGGAAACTGTCGGAACACGAAGCTTCGGGTACTGTCGTGAACTTGACCGAAACTTTGATGTCTTTCACGAACTCTTTGATATGCAGAATCGCGTTGGGGAAAAGTTACGGTTGTGAGTACGAGGAAGTAGTTGTTGATGAGGTACTGGGAAACCGGAGGAGCAGGTTGCAGGTTCTGCTCAACGAGGCTCAAGCGTTGCTTTCGGAGTTTTTCTTTTCGGATTATTTTCCGCCTATAGGAAAGTGGGTTGATAGAGTGACGGGAATTCTATCGCGGCTTGATAAAACGTTCAAGGAGTTGGACGCGTGCTACGAACGATTCATCTATGATCACATGGATTCGGCAAAGAGTGGTAAAAAAGATAATGACAACAAAGAAGTCAAAGATATTATTGATATTCTTCTCCAGCTACTTGATGATCGTTCCTTCACCTTTGATCTCACTCTCGACCACATAAAAGCCGTGCTCATGAACATCTTTATAGCAGGAACAGACCCGAGTTCCGCGACAATAGTTTGGGCAATGAATGCACTGTTGAAGAATCCCAATGTGATGAGCAAGGTTCAAGGAGAAGTGAGAAATCTATTCGGTGACAAAGATTTCATAAACGAAGATGATGTCGAAAGCCTTCCTTATCTCAAAGCAGTGGTGAAGGAGACATTAAGATTATTCCCACCTTCACCACTACTTTTGCCAAGGGTAACAATGGAAACATGCAACATAGAAGGGTACGAAATTCAAGCCAAAACTATAGTGCATGTTAATGCATGGGCCATAGCAAGGGACCCTGAGAATTGGGAAGAGCCTGAGAAATTTTTCCCCGAAAGGTTCCTTGAGAGTTCGATGGAGTTAAAGGGGAATGATGAGTTTAAGGTGATCCCGTTTGGTTCTGGAAGGAGAATGTGTCCTGCGAAGCACATGGGAATTATGAATGTTGAGCTTTCTCTTGCTAATCTCATTCACACGTTTGATTGGGAAGTGGCTAAAGGGTTCGACAAGGAAGAAATGTTGGACACGCAAATGAAACCAGGAATAACGATGCACAAGAAAAGTGATCTTTACCTAGTGGCAAAGAAACCGACAACGTAG
Predicted protein sequences of Glyma17g37520
>Glyma17g37520.1   sequence type=predicted peptide   gene model=Glyma17g37520   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGILVLLSLLSIVISIVLFITHTHKRNNTPRGPPGPPPLPLIGNLHQLHNSSPHLCLWQLAKLHGPLMSFRLGAVQTVVVSSARIAEQILKTHDLNFASRPLFVGPRKLSYDGLDMGFAPYGPYWREMKKLCIVHLFSAQRVRSFRPIRENEVAKMVRKLSEHEASGTVVNLTETLMSFTNSLICRIALGKSYGCEYEEVVVDEVLGNRRSRLQVLLNEAQALLSEFFFSDYFPPIGKWVDRVTGILSRLDKTFKELDACYERFIYDHMDSAKSGKKDNDNKEVKDIIDILLQLLDDRSFTFDLTLDHIKAVLMNIFIAGTDPSSATIVWAMNALLKNPNVMSKVQGEVRNLFGDKDFINEDDVESLPYLKAVVKETLRLFPPSPLLLPRVTMETCNIEGYEIQAKTIVHVNAWAIARDPENWEEPEKFFPERFLESSMELKGNDEFKVIPFGSGRRMCPAKHMGIMNVELSLANLIHTFDWEVAKGFDKEEMLDTQMKPGITMHKKSDLYLVAKKPTT*






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