Report for Sequence Feature Glyma17g35750
Feature Type: gene_model
Chromosome: Gm17
Start: 39752793
stop: 39754219
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma17g35750
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G24240 AT
Annotation by Michelle Graham. TAIR10: WRKY DNA-binding protein 7 | chr4:12571930-12573446 FORWARD LENGTH=353
SoyBase E_val: 8.00E-56 ISS
GO:0006355 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent
SoyBase N/A ISS
GO:0006457 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein folding
SoyBase N/A ISS
GO:0006857 GO-bp
Annotation by Michelle Graham. GO Biological Process: oligopeptide transport
SoyBase N/A ISS
GO:0009408 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to heat
SoyBase N/A ISS
GO:0009644 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to high light intensity
SoyBase N/A ISS
GO:0034976 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to endoplasmic reticulum stress
SoyBase N/A ISS
GO:0042542 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to hydrogen peroxide
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0003700 GO-mf
Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding transcription factor activity
SoyBase N/A ISS
GO:0005516 GO-mf
Annotation by Michelle Graham. GO Molecular Function: calmodulin binding
SoyBase N/A ISS
GO:0043565 GO-mf
Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding
SoyBase N/A ISS
PF03106 PFAM
WRKY DNA -binding domain
JGI ISS
PF10533 PFAM
Plant zinc cluster domain
JGI ISS
UniRef100_C7ENF8 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: WRKY1 n=1 Tax=Ipomoea batatas RepID=C7ENF8_IPOBA
SoyBase E_val: 6.00E-65 ISS
UniRef100_I1MXL4 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MXL4_SOYBN
SoyBase E_val: 0 ISS
Proteins Associated with Glyma17g35750
Locus Gene Symbol Protein Name
WRKY166 WRKY Transcription Factor
Expression Patterns of Glyma17g35750
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma17g35750 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.17g239200 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma17g35750
Coding sequences of Glyma17g35750
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma17g35750.2 sequence type=CDS gene model=Glyma17g35750 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCTGTGAGCGATGGCAATACGATTGCGGTGAAGGAAGCAGCTTCTGCGGGGATTCACAACGTAGAGAAACTCGTGAACATGATTTTGAATCAACACAACGAGGGTGGTTCTGAATTGGAGGCAGTTGCTGACGTGGCGGTGAACCGCTTCAGAGAGGTTATTTCGCTGCTTGAGAAACCAATTACCAGAACCACCGGTCACGCTCGTTTCCGAAGGGCCCCTACAACAGTGCCACCTGTCCCTGTTGTTCAGTTGCAGCAAATGGTGGATGATGATTCCAAACACAAACTGCAGAACAAAACAGAACAAAAACAAAAACAAAGTACCTCTGCTTTTAAGGTTTATTGTCCCCCTCCTTCTCCTCCTCTGCCTCAAAATCAAAATCACCACCACCAACAACAACCTTTCATTCTTCCTCTGCATAAGAATGAAGCAAATGGTTCTACTACCAACTCCCATTTTTCTACGTTATCCGGGGACACTGAGAGTTTGCAACGGTCATGTCTCTCTTCGGGGTTTCAAATTTCTCACGTGTCAATGCAAGGGGGTTCCTTTAAGCGTAAACCTCCACTTTCTACAAATTCTGTGAAGAGGAAGTGCAATTCAACGGGTTTTCCTGATACCAAGTGTGGATCGTCCTCTGTGCAGTGCCATTGCTCCAAGAAAAGGAAATTGAGGTTGAAGAATGTGATTAGAGTGCCGGCAATTAGTTCCAAGACTGCTGATATTCCACCCGATGAGTATTCGTGGAGAAAATATGGACAGAAACCAATAAAAGGTTCACCACACCCAAGGTATGTTGATGTGTTGTTGCATCATTCATTCATTTCTTAG
Predicted protein sequences of Glyma17g35750
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma17g35750.2 sequence type=predicted peptide gene model=Glyma17g35750 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAVSDGNTIAVKEAASAGIHNVEKLVNMILNQHNEGGSELEAVADVAVNRFREVISLLEKPITRTTGHARFRRAPTTVPPVPVVQLQQMVDDDSKHKLQNKTEQKQKQSTSAFKVYCPPPSPPLPQNQNHHHQQQPFILPLHKNEANGSTTNSHFSTLSGDTESLQRSCLSSGFQISHVSMQGGSFKRKPPLSTNSVKRKCNSTGFPDTKCGSSSVQCHCSKKRKLRLKNVIRVPAISSKTADIPPDEYSWRKYGQKPIKGSPHPRYVDVLLHHSFIS*