Report for Sequence Feature Glyma17g32070
Feature Type: gene_model
Chromosome: Gm17
Start: 35301765
stop: 35304986
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma17g32070
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G32190 AT
Annotation by Michelle Graham. TAIR10: Myosin heavy chain-related protein | chr4:15545052-15547689 FORWARD LENGTH=783
SoyBase E_val: 0 ISS
GO:0000302 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to reactive oxygen species
SoyBase N/A ISS
GO:0010039 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to iron ion
SoyBase N/A ISS
GO:0055072 GO-bp
Annotation by Michelle Graham. GO Biological Process: iron ion homeostasis
SoyBase N/A ISS
UniRef100_B9RP29 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Ubiquitin-protein ligase BRE1A, putative n=1 Tax=Ricinus communis RepID=B9RP29_RICCO
SoyBase E_val: 0 ISS
UniRef100_UPI000233DF30 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233DF30 related cluster n=1 Tax=unknown RepID=UPI000233DF30
SoyBase E_val: 0 ISS
Expression Patterns of Glyma17g32070
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma17g32070
Paralog Evidence Comments
Glyma14g14290 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma17g32070 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.17g211900 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma17g32070
Coding sequences of Glyma17g32070
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma17g32070.1 sequence type=CDS gene model=Glyma17g32070 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCTTTCTCCGCTTCAATTCGCCCTACCTCTTCTCACTCTCAGTTGTTTTGCTCTGTTAGGTTCAATAGGAGGCACCATAGCAGTAGCCGAATAGGTTTCTCGTCGAACGGCGGAAGAAGATGTCGTCGTTTACGGAACAGTGTTAGGTCGGTGTTGAACGACAACCGGCCTAGCGCAAGCGTGAACGACGATTACGGAGCGGCGGAGTCTGCTAGGGTTTTGTTCGAGAGACTGTTCACGGAGAACCGGATAACCGGAGATGAACCGGATCTTCGGATTCTTGAATCGGATCTCGAGGCGGCGCTGGCGGCGCTGAAGATGAAGGAGGATCACTTGATGGAGGCGGAGAGGACGGTGTTGTTGGAGAATAGTAAGTTGAAGCTCACGAAGGAGGAGCTGGAGCGGCAAGAGAGTGAAATTGAGGCTGCTAGGATTAGGTATGAGAAGCTTGAGGAGGAGATGAAGGAGACAATGGTTAAATTGGTTTCTCAGGCGGGGGAGATTGAGGAGCTGAAGCTTAGGGTTAGGGGTCGCGATAGTGAGATCGATGCGGTGAAGTATGCGCTGGGGTTGAAGGAAGGGGAAGTGGAGAAAATCAGGGTTGAATTGGAGGAGAGGAGTCGCGAGGCTGCGAATTTTGATTCTGAGCTTAGAGAGAAGGGGAGGATTCTGGATGAAGCGAATGAGGTTATGAAGAAGCAGGAGGCTGAGCTTGAGGAGCTAAAGAGGGTGGTTCGAGAGAAAGAGGAGGAGATTGAGGTTTTGTTGGTTCAGAGGGAGGTTGAGAGGGAGAAGCTGAGGGTGGCTGAGGCGAATTTGGAGAAGCAGGCAATGGACTGGATGTTGGCGCAGGAGGAGCTGAAGAGGCTGGGTGAGGATGCTGCGAGGCATGCTGAGGAGAGTAGTGAGACCTTGGAGGATTTCAGGAGGGTGAAGAAGCTTCTCAATGATGTGAGGTCTGAATTAGTTTCGTCTCAGCAAGCGTTGGCATCTTCCAGAAGCAAAATGGAGGAGCAGGAGCGGTTGTTGGAACTGCAGCTGAGTGAGCTTGGGGAGCAGAGGGCAAGTGTGATGTCCTACATGGAAAATTTGAAGGATGCACAGATTGAAGTGGAGAGTGAGAGAACGAAACTCAGGGTTGCAGAGTCTCGGAACAGAGAGCTTGAACGGGATCTGAAGATGGAAAAGGAGCTTATTAGTGAGTTGGAGGAGGAGCTGAAGAAAGAGAGAACTTCTTTGGAGCAGGCAGTCAAAGAAGTGGCTTTGCTTCAAGAGGAATTGGAGAAGAAAACTGCCGAGTTTAGAGAAACAAGTGCCGTTCTTCAGGTTAAAGAGTCAGAGCTTGTTGATGCTAAGCTAGAAATCCAGCGTTTGAAATCTGAAAAGGCTTCTCTTCAGGGTATCTTGGAGGAGAAAGACTTGGAGCTTTCCAGTGCTAGGAAAATGCTGGGGGATGTTAACCAGGAAATCTATGATCTTAAGATGCTTATGCACAGTAAAGAAACCCAGCTCATTGAAGCAAACAGTATGCTAAGGGACAAAGATGAGCATGTGAAGGTAATCCAGAACAAGTTGAATAATACAAACCAGAAGGCTTTTGAGGCTGAAACTGTGGTAGAAAGAATTTTAGATCTCACAAACAGACTTGTTGCTTCCATTAAGGATGAAGATATGAACTCATCAAAACCACTACTAGATGAAATGGGTAACCAACTACTTGATCAACTATTGGAGAAACCTGCTAATGAATTGAAATGGCAACAAAAAAGCCTTGAGAATGAGCTTGAGTTGGCCAAGGTAACCTTAAAAGAAAAGGAGATGGAAGTTCTTGCTGCACAGAGGGCTCTAACGATAAAAGATGAGGAGCTGAAGATGACACTTTCAAGATTGGACTCAAAAGAGGAAGAGTTGAAAAAAGTAAGGGAAGAAGTGACAGAAGACTCCAATGATCTTAAAAGGCTGTATGCTTGGGCACAGGAGAGAATTGGCGAGAAAAGCTTAGGAGATTTGGCAATTGAGAAACTTCAGCTTGAGGCAGCTCAGCTTGAAGTTGAAGCTGCCACCAATGCACTACAAAAACTGGCTGAAATGAGTCGACAACTTCTGAACAAAGCTATCATGAGTGTTGAAGCTGATAACTACATCAGTGTCCCTGATGGTAATAAAGCCCCCGATTTGATCCCCGACACCAATAACCCTGAATGTTTCGAAGAGGTAAAAGCAAGAGTTGCTCGCCTCTCATCTTTGTCTGAGCAGCTTGTGATGCAGGCGGGTATTGTTCCTGCAAACTAA
Predicted protein sequences of Glyma17g32070
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma17g32070.1 sequence type=predicted peptide gene model=Glyma17g32070 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAFSASIRPTSSHSQLFCSVRFNRRHHSSSRIGFSSNGGRRCRRLRNSVRSVLNDNRPSASVNDDYGAAESARVLFERLFTENRITGDEPDLRILESDLEAALAALKMKEDHLMEAERTVLLENSKLKLTKEELERQESEIEAARIRYEKLEEEMKETMVKLVSQAGEIEELKLRVRGRDSEIDAVKYALGLKEGEVEKIRVELEERSREAANFDSELREKGRILDEANEVMKKQEAELEELKRVVREKEEEIEVLLVQREVEREKLRVAEANLEKQAMDWMLAQEELKRLGEDAARHAEESSETLEDFRRVKKLLNDVRSELVSSQQALASSRSKMEEQERLLELQLSELGEQRASVMSYMENLKDAQIEVESERTKLRVAESRNRELERDLKMEKELISELEEELKKERTSLEQAVKEVALLQEELEKKTAEFRETSAVLQVKESELVDAKLEIQRLKSEKASLQGILEEKDLELSSARKMLGDVNQEIYDLKMLMHSKETQLIEANSMLRDKDEHVKVIQNKLNNTNQKAFEAETVVERILDLTNRLVASIKDEDMNSSKPLLDEMGNQLLDQLLEKPANELKWQQKSLENELELAKVTLKEKEMEVLAAQRALTIKDEELKMTLSRLDSKEEELKKVREEVTEDSNDLKRLYAWAQERIGEKSLGDLAIEKLQLEAAQLEVEAATNALQKLAEMSRQLLNKAIMSVEADNYISVPDGNKAPDLIPDTNNPECFEEVKARVARLSSLSEQLVMQAGIVPAN*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
