Glyma17g32051 - SoyBase

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Report for Sequence Feature Glyma17g32051

Feature Type:	gene_model
Chromosome:	Gm17
Start:	35263252
stop:	35270653
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma17g32051

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G32250	AT	Annotation by Michelle Graham. TAIR10: Protein kinase superfamily protein \| chr4:15570285-15572528 REVERSE LENGTH=611	SoyBase	E_val: 0	ISS
GO:0006468	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein phosphorylation	SoyBase	N/A	ISS
GO:0010260	GO-bp	Annotation by Michelle Graham. GO Biological Process: organ senescence	SoyBase	N/A	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0009507	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: chloroplast	SoyBase	N/A	ISS
GO:0009536	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plastid	SoyBase	N/A	ISS
GO:0004672	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein kinase activity	SoyBase	N/A	ISS
GO:0005524	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ATP binding	SoyBase	N/A	ISS
GO:0016301	GO-mf	Annotation by Michelle Graham. GO Molecular Function: kinase activity	SoyBase	N/A	ISS
GO:0016772	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups	SoyBase	N/A	ISS
KOG0198	KOG	MEKK and related serine/threonine protein kinases	JGI		ISS
PTHR22967	Panther	SERINE/THREONINE PROTEIN KINASE	JGI		ISS
PTHR22967:SF2	Panther	PROTEIN KINASE	JGI		ISS
PF07714	PFAM	Protein tyrosine kinase	JGI		ISS
UniRef100_G7I717	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: G protein-coupled receptor kinase n=1 Tax=Medicago truncatula RepID=G7I717_MEDTR	SoyBase	E_val: 0	ISS
UniRef100_UPI000233DF2F	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233DF2F related cluster n=1 Tax=unknown RepID=UPI000233DF2F	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma17g32051

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma17g32051 not represented in the dataset	Glyma17g32051 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma17g32051

Paralog	Evidence	Comments
Glyma14g14320	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma17g32051 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.17g211700	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma17g32051

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma17g32051

Limit To All Plant Sequences

>Glyma17g32051.2   sequence type=transcript   gene model=Glyma17g32051   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AAAAAACAAAGTAGAAACTTACAAGTAACGATTGGTTGAATAATAGAAGACAAAAGAAAGGGCAGGGTGTTGAAATTGAAGTTCAGTGTGCTAATGCTATACTCCACGTCCACTACTCCATCCATCAAGTCATACGTGTCAGCTCCGTTAAGTCGACATGTCACCATCATGGTGGGGACCCACAATCTAAATTACCAAATTACCCTATTCATTTTAGTATCTTACTAAATTACATAAATAAAAATCTTCCCTTCCGCCCTCCCCCCTGTTTGTTTGTTTGTTAGTTTGTTATGGTTCTCTCACTTTCTGGGTGCAGCATTTTTTTTCTGTTTCTCCGAGATTCCATCGCAAAGAGTCAAGAATGTCTAAAGAAGTTATTGCTACTCAATCACCTGCTCCTTTTGAGTATGAGATCTTGGATAGCGATGCTGAAGTCCTTAGAACTGTTAGAGCCTCATCGAATCACACGAATCCATGGATTGAACCTGGAAGGTTGAAACTTAGACACAGAATTGGCCGAGGCCCCTTTGGTGATGTCTGGTTAGCAACTCATCATCAGTCAACTGAAGATTATGACGAGTACCATGAAGTTGCTGCTAAGATGTTGCATCCAATCAAAGAGGATCATGTGAAGATTGTATTAGAGAAGTTCAATGAATTGTATTTTAAGTGCCAAGGAGTTGCTAGCATTTCCTGGCTACATGGAATTTCAGTCTTAAATGGAAGGATATGCATCATTATGAATTTGTATGAGGGTTCAATGGGTGACAAGATGGCAGGACTCAAAGAAGGAAGGATTTCATTGCATGATGTCCTAAGGTATGGAATCAATCTGGCTCAAGGTGTTCAGGAACTTCACTCTAAAGGGATCTTCATTCTGAACCTTAAACCTTTTAATGTTCTTCTCAATGGTAATGATCAAGCAATTTTGGGAGATGTTGGTATTCCTAGCCTTTTGCTTGGCTCATCATTCATAAGCTCGGACATGGCTAAGAGGTTTGGAACTCCCAATTACATGGCTCCAGAGCAATGGGAACCAGAGGTCAGAGGTCCTATATCTTTTGAAACAGATTCTTGGGGATTCGGTTGCACCATTGTCGAAATGTTGACCGGTAATCAACCTTGGTATGGATGTCCTGTTGGCAGAATATACCAGTCTGTTGTTGAAAAGCATGAAAAACCCAATATTCCAAGTGGCCTTCCTTCTTCAGTTGAGAATGTCCTCAGTGGATGCTTTGAGTATGATTTGAGGAATCGCCCTTTAATGGTAGATATTCTGAGTGTCTTTCAAAGTGCTCTGAATGAACTGACCAATAATCATGGAGAATGGAGATATCAAGGAAATGGGAAAGTTATTCCAAAATCAGGTAGCACTGGCTACACAGAGTGGTTCCTCTCAAAGGATCATCTTCAGGTGGGCGACGTGGTCCGATCTAGAAAGCCTTCCAATGCATGCAGACCTCAAAACATGGACATCCCAGAAGGAACTGTCGTTGGTTTAGAGCGAAATGCAGATCACGGATTCGCCCTCGTGAGGGTCCATGGAATTCATGACCCTGTTAAAATTCATATGTCAACTCTTGAACGTGTCACATTTGGCTTAGTAGCTGGTGATTGGGTCCGCCTGAGGGATGAAAATGAGAAACACTCACTGGTGGGCATTCTACATGCCGTCAATCGCGATGGTAGAGTGGCTGTTGGATTTCTCGGGCTGCAAACTCTCTGGAATGGAAACTCTTCGGAACTCGAAATCGCGGAATCATACTGCATCGGCCAGTTTGTCAGGCTCAAAGACAGCCTTTCAAGTCCTCGATTCGAATGGCGTCGCAAAAGGGGAGGAGCCTCGGCCGCTGGCAGGATTTCATGGATTCTACCAAATGGATGCTTGGTTGTCAAGTTCCCAGGAATGCTCCCTTTCGGAAATGAACCAAGCACCTACTTGGCTGATCCCTCCGAGGTGGAAGTGGTTGAGTTCAAGACATGTCCTGGAATGATAGAGAAGTACCAACATGTAGAGGATCATCACTGGGCAATTAGGCCTGTTCTAATTGCAATTGGTCTATTCACTGCTCTCAAACTAGGCATATCAGTTGGAAAGAAAGTGAGGAGGAACAACAAGGTAACTGCAATAGAAACTGAAACTCAATATCTTGATGGTCAAAATCAAAATGCTGCCACCTCTGCTACAACTACAACTACTACAAAGAAACCTTCCACTTCCAGTGCTACAATACCAGTTAGCTCAATGTGGGTTCCTGCAGTTGCTAATATGATTTTTAAGGAAAGTGTTACCTCGTCCAATGGTCGGTAGTTTATTTATTTTGGTGTTTCTATCTCAAAACAGTTACATAATAATTAAACATGGACTTTAAATTAAATGGTAGGCACTAATTATACATGAATATGACATCAGGATTCAGGACTGACTCTGAATGTTGACATTGTACATATATCCTTCACAAGATTAGCTCTAGTACAGTCTCCAATGCTTTGCACAATGAACACAAATTTCGTTATGTGGTTCCTGAGTTTTAATAAAGAATAGAAGGGTAGGAGTGAAATGAGCAATGAATCAAGATACATGTATATGCTTATTCTTGAAGC

Coding sequences of Glyma17g32051

Limit To All Plant Sequences

>Glyma17g32051.1   sequence type=CDS   gene model=Glyma17g32051   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTCTAAAGAAGTTATTGCTACTCAATCACCTGCTCCTTTTGAGTATGAGATCTTGGATAGCGATGCTGAAGTCCTTAGAACTGTTAGAGCCTCATCGAATCACACGAATCCATGGATTGAACCTGGAAGGTTGAAACTTAGACACAGAATTGGCCGAGGCCCCTTTGGTGATGTCTGGTTAGCAACTCATCATCAGTCAACTGAAGATTATGACGAGTACCATGAAGTTGCTGCTAAGATGTTGCATCCAATCAAAGAGGATCATGTGAAGATTGTATTAGAGAAGTTCAATGAATTGTATTTTAAGTGCCAAGGAGTTGCTAGCATTTCCTGGCTACATGGAATTTCAGTCTTAAATGGAAGGATATGCATCATTATGAATTTGTATGAGGGTTCAATGGGTGACAAGATGGCAGGACTCAAAGAAGGAAGGATTTCATTGCATGATGTCCTAAGGTATGGAATCAATCTGGCTCAAGGTGTTCAGGAACTTCACTCTAAAGGGATCTTCATTCTGAACCTTAAACCTTTTAATGTTCTTCTCAATGGTAATGATCAAGCAATTTTGGGAGATGTTGGTATTCCTAGCCTTTTGCTTGGCTCATCATTCATAAGCTCGGACATGGCTAAGAGGTTTGGAACTCCCAATTACATGGCTCCAGAGCAATGGGAACCAGAGGTCAGAGGTCCTATATCTTTTGAAACAGATTCTTGGGGATTCGGTTGCACCATTGTCGAAATGTTGACCGGTAATCAACCTTGGTATGGATGTCCTGTTGGCAGAATATACCAGTCTGTTGTTGAAAAGCATGAAAAACCCAATATTCCAAGTGGCCTTCCTTCTTCAGTTGAGAATGTCCTCAGTGGATGCTTTGAGTATGATTTGAGGAATCGCCCTTTAATGGTAGATATTCTGAGTGTCTTTCAAAGTGCTCTGAATGAACTGACCAATAATCATGGAGAATGGAGATATCAAGGAAATGGGAAAGTTATTCCAAAATCAGGTAGCACTGGCTACACAGAGTGGTTCCTCTCAAAGGATCATCTTCAGGTGGGCGACGTGGTCCGATCTAGAAAGCCTTCCAATGCATGCAGACCTCAAAACATGGACATCCCAGAAGGAACTGTCGTTGGTTTAGAGCGAAATGCAGATCACGGATTCGCCCTCGTGAGGGTCCATGGAATTCATGACCCTGTTAAAATTCATATGTCAACTCTTGAACGTGTCACATTTGGCTTAGTAGCTGGTGATTGGGTCCGCCTGAGGGATGAAAATGAGAAACACTCACTGGTGGGCATTCTACATGCCGTCAATCGCGATGGTAGAGTGGCTGTTGGATTTCTCGGGCTGCAAACTCTCTGGAATGGAAACTCTTCGGAACTCGAAATCGCGGAATCATACTGCATCGGCCAGTTTGTCAGGCTCAAAGACAGCCTTTCAAGTCCTCGATTCGAATGGCGTCGCAAAAGGGGAGGAGCCTCGGCCGCTGGCAGGATTTCATGGATTCTACCAAATGGATGCTTGGTTGTCAAGTTCCCAGGAATGCTCCCTTTCGGAAATGAACCAAGCACCTACTTGGCTGATCCCTCCGAGGTGGAAGTGGTTGAGTTCAAGACATGTCCTGGAATGATAGAGAAGTACCAACATGTAGAGGATCATCACTGGGCAATTAGGCCTGTTCTAATTGCAATTGGTCTATTCACTGCTCTCAAACTAGGCATATCAGTTGGAAAGAAAGTGAGGAGGAACAACAAGGTAACTGCAATAGAAACTGAAACTCAATATCTTGATGGTCAAAATCAAAATGCTGCCACCTCTGCTACAACTACAACTACTACAAAGAAACCTTCCACTTCCAGTGCTACAATACCAGTTAGCTCAATGTGGGTTCCTGCAGTTGCTAATATGATTTTTAAGGAAAGTGTTACCTCGTCCAATGGTCGGTAG

>Glyma17g32051.2   sequence type=CDS   gene model=Glyma17g32051   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTCTAAAGAAGTTATTGCTACTCAATCACCTGCTCCTTTTGAGTATGAGATCTTGGATAGCGATGCTGAAGTCCTTAGAACTGTTAGAGCCTCATCGAATCACACGAATCCATGGATTGAACCTGGAAGGTTGAAACTTAGACACAGAATTGGCCGAGGCCCCTTTGGTGATGTCTGGTTAGCAACTCATCATCAGTCAACTGAAGATTATGACGAGTACCATGAAGTTGCTGCTAAGATGTTGCATCCAATCAAAGAGGATCATGTGAAGATTGTATTAGAGAAGTTCAATGAATTGTATTTTAAGTGCCAAGGAGTTGCTAGCATTTCCTGGCTACATGGAATTTCAGTCTTAAATGGAAGGATATGCATCATTATGAATTTGTATGAGGGTTCAATGGGTGACAAGATGGCAGGACTCAAAGAAGGAAGGATTTCATTGCATGATGTCCTAAGGTATGGAATCAATCTGGCTCAAGGTGTTCAGGAACTTCACTCTAAAGGGATCTTCATTCTGAACCTTAAACCTTTTAATGTTCTTCTCAATGGTAATGATCAAGCAATTTTGGGAGATGTTGGTATTCCTAGCCTTTTGCTTGGCTCATCATTCATAAGCTCGGACATGGCTAAGAGGTTTGGAACTCCCAATTACATGGCTCCAGAGCAATGGGAACCAGAGGTCAGAGGTCCTATATCTTTTGAAACAGATTCTTGGGGATTCGGTTGCACCATTGTCGAAATGTTGACCGGTAATCAACCTTGGTATGGATGTCCTGTTGGCAGAATATACCAGTCTGTTGTTGAAAAGCATGAAAAACCCAATATTCCAAGTGGCCTTCCTTCTTCAGTTGAGAATGTCCTCAGTGGATGCTTTGAGTATGATTTGAGGAATCGCCCTTTAATGGTAGATATTCTGAGTGTCTTTCAAAGTGCTCTGAATGAACTGACCAATAATCATGGAGAATGGAGATATCAAGGAAATGGGAAAGTTATTCCAAAATCAGGTAGCACTGGCTACACAGAGTGGTTCCTCTCAAAGGATCATCTTCAGGTGGGCGACGTGGTCCGATCTAGAAAGCCTTCCAATGCATGCAGACCTCAAAACATGGACATCCCAGAAGGAACTGTCGTTGGTTTAGAGCGAAATGCAGATCACGGATTCGCCCTCGTGAGGGTCCATGGAATTCATGACCCTGTTAAAATTCATATGTCAACTCTTGAACGTGTCACATTTGGCTTAGTAGCTGGTGATTGGGTCCGCCTGAGGGATGAAAATGAGAAACACTCACTGGTGGGCATTCTACATGCCGTCAATCGCGATGGTAGAGTGGCTGTTGGATTTCTCGGGCTGCAAACTCTCTGGAATGGAAACTCTTCGGAACTCGAAATCGCGGAATCATACTGCATCGGCCAGTTTGTCAGGCTCAAAGACAGCCTTTCAAGTCCTCGATTCGAATGGCGTCGCAAAAGGGGAGGAGCCTCGGCCGCTGGCAGGATTTCATGGATTCTACCAAATGGATGCTTGGTTGTCAAGTTCCCAGGAATGCTCCCTTTCGGAAATGAACCAAGCACCTACTTGGCTGATCCCTCCGAGGTGGAAGTGGTTGAGTTCAAGACATGTCCTGGAATGATAGAGAAGTACCAACATGTAGAGGATCATCACTGGGCAATTAGGCCTGTTCTAATTGCAATTGGTCTATTCACTGCTCTCAAACTAGGCATATCAGTTGGAAAGAAAGTGAGGAGGAACAACAAGGTAACTGCAATAGAAACTGAAACTCAATATCTTGATGGTCAAAATCAAAATGCTGCCACCTCTGCTACAACTACAACTACTACAAAGAAACCTTCCACTTCCAGTGCTACAATACCAGTTAGCTCAATGTGGGTTCCTGCAGTTGCTAATATGATTTTTAAGGAAAGTGTTACCTCGTCCAATGGTCGGTAG

Predicted protein sequences of Glyma17g32051

Limit To All Plant Sequences

>Glyma17g32051.1   sequence type=predicted peptide   gene model=Glyma17g32051   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSKEVIATQSPAPFEYEILDSDAEVLRTVRASSNHTNPWIEPGRLKLRHRIGRGPFGDVWLATHHQSTEDYDEYHEVAAKMLHPIKEDHVKIVLEKFNELYFKCQGVASISWLHGISVLNGRICIIMNLYEGSMGDKMAGLKEGRISLHDVLRYGINLAQGVQELHSKGIFILNLKPFNVLLNGNDQAILGDVGIPSLLLGSSFISSDMAKRFGTPNYMAPEQWEPEVRGPISFETDSWGFGCTIVEMLTGNQPWYGCPVGRIYQSVVEKHEKPNIPSGLPSSVENVLSGCFEYDLRNRPLMVDILSVFQSALNELTNNHGEWRYQGNGKVIPKSGSTGYTEWFLSKDHLQVGDVVRSRKPSNACRPQNMDIPEGTVVGLERNADHGFALVRVHGIHDPVKIHMSTLERVTFGLVAGDWVRLRDENEKHSLVGILHAVNRDGRVAVGFLGLQTLWNGNSSELEIAESYCIGQFVRLKDSLSSPRFEWRRKRGGASAAGRISWILPNGCLVVKFPGMLPFGNEPSTYLADPSEVEVVEFKTCPGMIEKYQHVEDHHWAIRPVLIAIGLFTALKLGISVGKKVRRNNKVTAIETETQYLDGQNQNAATSATTTTTTKKPSTSSATIPVSSMWVPAVANMIFKESVTSSNGR*

>Glyma17g32051.2   sequence type=predicted peptide   gene model=Glyma17g32051   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSKEVIATQSPAPFEYEILDSDAEVLRTVRASSNHTNPWIEPGRLKLRHRIGRGPFGDVWLATHHQSTEDYDEYHEVAAKMLHPIKEDHVKIVLEKFNELYFKCQGVASISWLHGISVLNGRICIIMNLYEGSMGDKMAGLKEGRISLHDVLRYGINLAQGVQELHSKGIFILNLKPFNVLLNGNDQAILGDVGIPSLLLGSSFISSDMAKRFGTPNYMAPEQWEPEVRGPISFETDSWGFGCTIVEMLTGNQPWYGCPVGRIYQSVVEKHEKPNIPSGLPSSVENVLSGCFEYDLRNRPLMVDILSVFQSALNELTNNHGEWRYQGNGKVIPKSGSTGYTEWFLSKDHLQVGDVVRSRKPSNACRPQNMDIPEGTVVGLERNADHGFALVRVHGIHDPVKIHMSTLERVTFGLVAGDWVRLRDENEKHSLVGILHAVNRDGRVAVGFLGLQTLWNGNSSELEIAESYCIGQFVRLKDSLSSPRFEWRRKRGGASAAGRISWILPNGCLVVKFPGMLPFGNEPSTYLADPSEVEVVEFKTCPGMIEKYQHVEDHHWAIRPVLIAIGLFTALKLGISVGKKVRRNNKVTAIETETQYLDGQNQNAATSATTTTTTKKPSTSSATIPVSSMWVPAVANMIFKESVTSSNGR*

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