Glyma17g26900 - SoyBase

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Report for Sequence Feature Glyma17g26900

Feature Type:	gene_model
Chromosome:	Gm17
Start:	28323661
stop:	28336490
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma17g26900

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G11640	AT	Annotation by Michelle Graham. TAIR10: Thioredoxin superfamily protein \| chr5:3742008-3743703 FORWARD LENGTH=253	SoyBase	E_val: 4.00E-97	ISS
KOG0914	KOG	Thioredoxin-like protein	JGI		ISS
PTHR15853	Panther	THIOREDOXIN-RELATED	JGI		ISS
UniRef100_B6T5H1	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Electron transporter n=1 Tax=Zea mays RepID=B6T5H1_MAIZE	SoyBase	E_val: 1.00E-81	ISS
UniRef100_I1MWA8	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MWA8_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma17g26900

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma17g26900 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.17g192700	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma17g26900

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma17g26900

Limit To All Plant Sequences

>Glyma17g26900.5   sequence type=transcript   gene model=Glyma17g26900   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TCAACAACTACACTTTGCAAAGGCATACTAGAAAATCTATCTATGATTATGAGAGCGTAGTTGAAAGCAACGACTGAAATCGAGAGGGAGACGAAAAGTTTAGATCGAGAGAGATGGGAAAGGAGAGTAGCAAAGATACGGTTCCGGTGACGCAGTGGCTGAATCGAATGGTCTCAGAACCTTACTACCTCTTCCATTTCTTAACCTTCTTCTCCTATTTCGTCGTTCGCAGCTCCGCAACCCAAATCTTAGCGCCTCATCTCACTCACCATCTCCTTCGTCGCGAAATACAAACACTGCTAGTGTTCGCGATATTGGCTTTCATCAAGGGAATAAAAGAAGAAACATGGGAAGCCTTTATAGCTGATGTGCTTTTCCTGGCCAAGATTTGTCTTTTTCTCCTAGCCTTTACAATGGATCGCCGCTTAGCCGTTTGGTATATTCTTGTATTTTTAGTGATACATATGTTAACACAACAACCTCCATTCCAAGGACTAGGTACGTCTAGCAAGCTAACACCGTTGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGGTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTACATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCCCAATGCTGCTGAAAGATTTGGAATATCTCTAAGTGGAAGCATGGGCCAGCTTCCAACATTTATCTTATTTGAGAATGCAGCTGAAGTTGCCCGCTTTCCTGAGTTGGATTTTGAAGCTGCATATTTTCACCCTAAAATTACAAAGGGGCTTCTTTCTCGACATTTTGAGCTTGATCGGCACCTTCTCGAATATGTTAGTGGTAAATAGTAGGATGTTAGTGGAGCAAGTTGTCCGAAATTTAGTCATCACTGAGAATGGCAATTTTGGATTTCCGGATATCTGAGGAGGACATTTTCGTAAATGAACTTTGAAAGTTAACGTTTGTTTAACACCATCACACAAGGGTCAAAGTAATGTCTTCAGACAACGGGGGTGTATGTGTAATTAGATTAAATCTCAATAGGTGTTATTATAATTTGTTCTTTATTTTATAATCTATCATCGGTTCTAAGTGAAAGTCAAAAAATTTGGCGAGAGAATTCAAATTTTAGTTGAAATTATGTTGTCATAAATTTCTTTTAAATTGTCTGAATATAATGTCTGACGTTTCTTTTTATGGTATAAAAAATAAATTTTGGAAAAGAATTTCCTTTCACAATGAGAA

>Glyma17g26900.6   sequence type=transcript   gene model=Glyma17g26900   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TCAACAACTACACTTTGCAAAGGCATACTAGAAAATCTATCTATGATTATGAGAGCGTAGTTGAAAGCAACGACTGAAATCGAGAGGGAGACGAAAAGTTTAGATCGAGAGAGATGGGAAAGGAGAGTAGCAAAGATACGGTTCCGGTGACGCAGTGGCTGAATCGAATGGTCTCAGAACCTTACTACCTCTTCCATTTCTTAACCTTCTTCTCCTATTTCGTCGTTCGCAGCTCCGCAACCCAAATCTTAGCGCCTCATCTCACTCACCATCTCCTTCGTCGCGAAATACAAACACTGCTAGTGTTCGCGATATTGGCTTTCATCAAGGGAATAAAAGAAGAAACATGGGAAGCCTTTATAGCTGATGTGCTTTTCCTGGCCAAGATTTGTCTTTTTCTCCTAGCCTTTACAATGGATCGCCGCTTAGCCGTTTGGTATATTCTTGTATTTTTAGGTACGTCTAGCAAGCTAACACCGTTGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGGTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTACATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCCCAATGCTGCTGAAAGATTTGGAATATCTCTAAGTGGAAGCATGGGCCAGCTTCCAACATTTATCTTATTTGAGAATGCAGCTGAAGTTGCCCGCTTTCCTGAGTTGGATTTTGAAGCTGCATATTTTCACCCTAAAATTACAAAGGGGCTTCTTTCTCGACATTTTGAGCTTGATCGGCACCTTCTCGAATATGTTAGTGGTAAATAGGATGTTAGTGGAGCAAGTTGTCCGAAATTTAGTCATCACTGAGAATGGCAATTTTGGATTTCCGGATATCTGAGGAGGACATTTTCGTAAATGAACTTTGAAAGTTAACGTTTGTTTAACACCATCACACAAGGGTCAAAGTAATGTCTTCAGACAACGGGGGTGTATGTGTAATTAGATTAAATCTCAATAGGTGTTATTATAATTTGTTCTTTATTTTATAATCTATCATCGGTTCTAAGTGAAAGTCAAAAAATTTGGCGAGAGAATTCAAATTTTAGTTGAAATTATGTTGTCATAAATTTCTTTTAAATTGTCTGAATATAATGTCTGACGTTTCTTTTTATGGTATAAAAAATAAATTTTGGAAAAGAATTTCCTTTCACAATGAGAA

>Glyma17g26900.7   sequence type=transcript   gene model=Glyma17g26900   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TCAACAACTACACTTTGCAAAGGCATACTAGAAAATCTATCTATGATTATGAGAGCGTAGTTGAAAGCAACGACTGAAATCGAGAGGGAGACGAAAAGTTTAGATCGAGAGAGATGGGAAAGGAGAGTAGCAAAGATACGGTTCCGGTGACGCAGTGGCTGAATCGAATGGTCTCAGAACCTTACTACCTCTTCCATTTCTTAACCTTCTTCTCCTATTTCGTCGTTCGCAGCTCCGCAACCCAAATCTTAGCGCCTCATCTCACTCACCATCTCCTTCGTCGCGAAATACAAACACTGCTAGTGTTCGCGATATTGGCTTTCATCAAGGGAATAAAAGAAGAAACATGGGAAGCCTTTATAGCTGATGTGCTTTTCCTGGCCAAGATTTGTCTTTTTCTCCTAGCCTTTACAATGGATCGCCGCTTAGCCGTTTGGTATATTCTTGTATTTTTAGGTACGTCTAGCAAGCTAACACCGTTGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGGTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTACATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCCCAATGCTGCTGAAAGATTTGGAATATCTCTAAGTGGAAGCATGGGCCAGCTTCCAACATTTATCTTATTTGAGAATGCAGCTGAAGTTGCCCGCTTTCCTGAGTTGGATTTTGAAGCTGCATATTTTCACCCTAAAATTACAAAGGGGCTTCTTTCTCGACATTTTGAGCTTGATCGGCACCTTCTCGAATATGTTAGTGGTAAATAGTAGGATGTTAGTGGAGCAAGTTGTCCGAAATTTAGTCATCACTGAGAATGGCAATTTTGGATTTCCGGATATCTGAGGAGGACATTTTCGTAAATGAACTTTGAAAGTTAACGTTTGTTTAACACCATCACACAAGGGTCAAAGTAATGTCTTCAGACAACGGGGGTGTATGTGTAATTAGATTAAATCTCAATAGGTGTTATTATAATTTGTTCTTTATTTTATAATCTATCATCGGTTCTAAGTGAAAGTCAAAAAATTTGGCGAGAGAATTCAAATTTTAGTTGAAATTATGTTGTCATAAATTTCTTTTAAATTGTCTGAATATAATGTCTGACGTTTCTTTTTATGGTATAAAAAATAAATTTTGGAAAAGAATTTCCTTTCACAATGAGAA

Coding sequences of Glyma17g26900

Limit To All Plant Sequences

>Glyma17g26900.4   sequence type=CDS   gene model=Glyma17g26900   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGAAAGGAGAGTAGCAAAGATACGGTTCCGGTGACGCAGTGGCTGAATCGAATGGTCTCAGAACCTTACTACCTCTTCCATTTCTTAACCTTCTTCTCCTATTTCGTCGTTCGCAGCTCCGCAACCCAAATCTTAGCGCCTCATCTCACTCACCATCTCCTTCGTCGCGAAATACAAACACTGCTAGTGTTCGCGATATTGGCTTTCATCAAGGGAATAAAAGAAGAAACATGGGAAGCCTTTATAGCTGATGTGCTTTTCCTGGCCAAGATTTGTCTTTTTCTCCTAGCCTTTACAATGGATCGCCGCTTAGCCGTTTGGTATATTCTTGTATTTTTAGTGATACATATGTTAACACAACAACCTCCATTCCAAGGACTAGGTACGTCTAGCAAGCTAACACCGTTGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGGTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTACATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCCCAATGCTGCTGAAAGATTTGGAATATCTCTAAGTGGAAGCATGGGCCAGCTTCCAACATTTATCTTATTTGAGAATGCAGCTGAAGTTGCCCGCTTTCCTGAGTTGGATTTTGAAGCTGCATATTTTCACCCTAAAATTACAAAGGGGCTTCTTTCTCGACATTTTGAGCTTGATCGGCACCTTCTCGAATATGTTAGTGGTAAATAG

>Glyma17g26900.5   sequence type=CDS   gene model=Glyma17g26900   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGAAAGGAGAGTAGCAAAGATACGGTTCCGGTGACGCAGTGGCTGAATCGAATGGTCTCAGAACCTTACTACCTCTTCCATTTCTTAACCTTCTTCTCCTATTTCGTCGTTCGCAGCTCCGCAACCCAAATCTTAGCGCCTCATCTCACTCACCATCTCCTTCGTCGCGAAATACAAACACTGCTAGTGTTCGCGATATTGGCTTTCATCAAGGGAATAAAAGAAGAAACATGGGAAGCCTTTATAGCTGATGTGCTTTTCCTGGCCAAGATTTGTCTTTTTCTCCTAGCCTTTACAATGGATCGCCGCTTAGCCGTTTGGTATATTCTTGTATTTTTAGTGATACATATGTTAACACAACAACCTCCATTCCAAGGACTAGGTACGTCTAGCAAGCTAACACCGTTGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGGTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTACATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCCCAATGCTGCTGAAAGATTTGGAATATCTCTAAGTGGAAGCATGGGCCAGCTTCCAACATTTATCTTATTTGAGAATGCAGCTGAAGTTGCCCGCTTTCCTGAGTTGGATTTTGAAGCTGCATATTTTCACCCTAAAATTACAAAGGGGCTTCTTTCTCGACATTTTGAGCTTGATCGGCACCTTCTCGAATATGTTAGTGGTAAATAG

>Glyma17g26900.6   sequence type=CDS   gene model=Glyma17g26900   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGAAAGGAGAGTAGCAAAGATACGGTTCCGGTGACGCAGTGGCTGAATCGAATGGTCTCAGAACCTTACTACCTCTTCCATTTCTTAACCTTCTTCTCCTATTTCGTCGTTCGCAGCTCCGCAACCCAAATCTTAGCGCCTCATCTCACTCACCATCTCCTTCGTCGCGAAATACAAACACTGCTAGTGTTCGCGATATTGGCTTTCATCAAGGGAATAAAAGAAGAAACATGGGAAGCCTTTATAGCTGATGTGCTTTTCCTGGCCAAGATTTGTCTTTTTCTCCTAGCCTTTACAATGGATCGCCGCTTAGCCGTTTGGTATATTCTTGTATTTTTAGGTACGTCTAGCAAGCTAACACCGTTGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGGTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTACATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCCCAATGCTGCTGAAAGATTTGGAATATCTCTAAGTGGAAGCATGGGCCAGCTTCCAACATTTATCTTATTTGAGAATGCAGCTGAAGTTGCCCGCTTTCCTGAGTTGGATTTTGAAGCTGCATATTTTCACCCTAAAATTACAAAGGGGCTTCTTTCTCGACATTTTGAGCTTGATCGGCACCTTCTCGAATATGTTAGTGGTAAATAG

>Glyma17g26900.7   sequence type=CDS   gene model=Glyma17g26900   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGAAAGGAGAGTAGCAAAGATACGGTTCCGGTGACGCAGTGGCTGAATCGAATGGTCTCAGAACCTTACTACCTCTTCCATTTCTTAACCTTCTTCTCCTATTTCGTCGTTCGCAGCTCCGCAACCCAAATCTTAGCGCCTCATCTCACTCACCATCTCCTTCGTCGCGAAATACAAACACTGCTAGTGTTCGCGATATTGGCTTTCATCAAGGGAATAAAAGAAGAAACATGGGAAGCCTTTATAGCTGATGTGCTTTTCCTGGCCAAGATTTGTCTTTTTCTCCTAGCCTTTACAATGGATCGCCGCTTAGCCGTTTGGTATATTCTTGTATTTTTAGGTACGTCTAGCAAGCTAACACCGTTGCAGTTGGAAAGCCTGCTGACAGAGGGAACAACTACAAGATTGTGGCTGGTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTACATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCCCAATGCTGCTGAAAGATTTGGAATATCTCTAAGTGGAAGCATGGGCCAGCTTCCAACATTTATCTTATTTGAGAATGCAGCTGAAGTTGCCCGCTTTCCTGAGTTGGATTTTGAAGCTGCATATTTTCACCCTAAAATTACAAAGGGGCTTCTTTCTCGACATTTTGAGCTTGATCGGCACCTTCTCGAATATGTTAGTGGTAAATAG

Predicted protein sequences of Glyma17g26900

Limit To All Plant Sequences

>Glyma17g26900.4   sequence type=predicted peptide   gene model=Glyma17g26900   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGKESSKDTVPVTQWLNRMVSEPYYLFHFLTFFSYFVVRSSATQILAPHLTHHLLRREIQTLLVFAILAFIKGIKEETWEAFIADVLFLAKICLFLLAFTMDRRLAVWYILVFLVIHMLTQQPPFQGLGTSSKLTPLQLESLLTEGTTTRLWLVEFRSSYSPACIRSSQQFPELSITYSSKNLSFGIVDLGLFPNAAERFGISLSGSMGQLPTFILFENAAEVARFPELDFEAAYFHPKITKGLLSRHFELDRHLLEYVSGK*

>Glyma17g26900.5   sequence type=predicted peptide   gene model=Glyma17g26900   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGKESSKDTVPVTQWLNRMVSEPYYLFHFLTFFSYFVVRSSATQILAPHLTHHLLRREIQTLLVFAILAFIKGIKEETWEAFIADVLFLAKICLFLLAFTMDRRLAVWYILVFLVIHMLTQQPPFQGLGTSSKLTPLQLESLLTEGTTTRLWLVEFRSSYSPACIRSSQQFPELSITYSSKNLSFGIVDLGLFPNAAERFGISLSGSMGQLPTFILFENAAEVARFPELDFEAAYFHPKITKGLLSRHFELDRHLLEYVSGK*

>Glyma17g26900.6   sequence type=predicted peptide   gene model=Glyma17g26900   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGKESSKDTVPVTQWLNRMVSEPYYLFHFLTFFSYFVVRSSATQILAPHLTHHLLRREIQTLLVFAILAFIKGIKEETWEAFIADVLFLAKICLFLLAFTMDRRLAVWYILVFLGTSSKLTPLQLESLLTEGTTTRLWLVEFRSSYSPACIRSSQQFPELSITYSSKNLSFGIVDLGLFPNAAERFGISLSGSMGQLPTFILFENAAEVARFPELDFEAAYFHPKITKGLLSRHFELDRHLLEYVSGK*

>Glyma17g26900.7   sequence type=predicted peptide   gene model=Glyma17g26900   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGKESSKDTVPVTQWLNRMVSEPYYLFHFLTFFSYFVVRSSATQILAPHLTHHLLRREIQTLLVFAILAFIKGIKEETWEAFIADVLFLAKICLFLLAFTMDRRLAVWYILVFLGTSSKLTPLQLESLLTEGTTTRLWLVEFRSSYSPACIRSSQQFPELSITYSSKNLSFGIVDLGLFPNAAERFGISLSGSMGQLPTFILFENAAEVARFPELDFEAAYFHPKITKGLLSRHFELDRHLLEYVSGK*

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