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Report for Sequence Feature Glyma17g23861

Feature Type:gene_model
Chromosome:Gm17
Start:23984794
stop:23985130
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma17g23861
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
ATMG00030AT Annotation by Michelle Graham. TAIR10: hypothetical protein | chrM:11918-12241 FORWARD LENGTH=107 SoyBaseE_val: 5.00E-36ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0005739GO-cc Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
UniRef100_G7I9T8UniRef Annotation by Michelle Graham. Most informative UniRef hit: Mitochondrial protein, putative n=1 Tax=Medicago truncatula RepID=G7I9T8_MEDTR SoyBaseE_val: 9.00E-27ISS
UniRef100_P93276UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized mitochondrial protein AtMg00030 n=1 Tax=Arabidopsis thaliana RepID=M030_ARATH SoyBaseE_val: 2.00E-33ISS

Expression Patterns of Glyma17g23861
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma17g23861 not represented in the dataset
Glyma17g23861 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma17g23861 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma17g23861
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma17g23861
>Glyma17g23861.1   sequence type=CDS   gene model=Glyma17g23861   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TCCAAAGAGCGCAGACTAGCCGCCGATCTTGGATACGGTTTCCCGATCGGAGATCCATGGATCACAGACGGTATCTCCCCATGGCCTTTCGCCTCTGAAAACGTCCTTCCTTCTCAATGCCCGGACATCCATCCAATGCATTCTTTTCGATCTTGCTACACAAGCGGTACACTGAAGACCAACCCAATCTCGATGAGAATCAGTACACGCAACTACATCTCCATATTCAAAGGGCCAGTGAGCGGACGCTTTGTCATTAGAGTGTTATAA
Predicted protein sequences of Glyma17g23861
>Glyma17g23861.1   sequence type=predicted peptide   gene model=Glyma17g23861   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
SKERRLAADLGYGFPIGDPWITDGISPWPFASENVLPSQCPDIHPMHSFRSCYTSGTLKTNPISMRISTRNYISIFKGPVSGRFVIRVL*






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