|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G66816 | AT | Annotation by Michelle Graham. TAIR10: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:26681495-26681800 FORWARD LENGTH=101 | SoyBase | E_val: 9.00E-15 | ISS |
UniRef100_C6T0H6 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6T0H6_SOYBN | SoyBase | E_val: 3.00E-41 | ISS |
UniRef100_Q9SKW7 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: F5J5.3 n=1 Tax=Arabidopsis thaliana RepID=Q9SKW7_ARATH | SoyBase | E_val: 2.00E-07 | ISS |
Glyma17g20400 not represented in the dataset |
Glyma17g20400 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
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Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma17g20400.1 sequence type=CDS gene model=Glyma17g20400 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GAATCACCACAACACCATGAGGAATCTAGTAAATTGGAAGATTCAGGTGCAGACAACACCAATGCTTTCCGACCGACTACGCCGGGAGGGAGTCCTGGTGTTGGCCACAAAATGATTACATCATCATCAGAAGATAATAAGGGTTCAAAAGATGATTTCAAACCTACTGACCCAGGTCACAGCCCAGGAGTTGGTCATGCTTACAAAAACAAAATTGGAGATGGAAATTAG
>Glyma17g20400.1 sequence type=predicted peptide gene model=Glyma17g20400 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ESPQHHEESSKLEDSGADNTNAFRPTTPGGSPGVGHKMITSSSEDNKGSKDDFKPTDPGHSPGVGHAYKNKIGDGN*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||