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Report for Sequence Feature Glyma17g20340

Feature Type:gene_model
Chromosome:Gm17
Start:19150747
stop:19151798
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma17g20340
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
UniRef100_I1MVZ4UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MVZ4_SOYBN SoyBaseE_val: 4.00E-51ISS

Expression Patterns of Glyma17g20340
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma17g20340 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.17g176700 Wm82.a2.v1IGC As supplied by JGI

References for Glyma17g20340
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma17g20340
>Glyma17g20340.1   sequence type=CDS   gene model=Glyma17g20340   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCACGTCTCACTCACTTTGTCTTGCTCTTTGTACTCCTCTTTCTGTCCCATGAACTACTCGGTAGTGAGGGAAGGAATTTGAGACAAATAACCATTCAATCACCAGATGCTACCAAAGCAATGAGCATTGCAACAAAAAGTGCTAATGCCATCCCAAGCTACCGTAGCATTAGAAGCCTATCCGGAGATGTTGAAGCTTTTAGGCCCACAACTCCTGGCCACAGTCCTGGAGTAGGCCATTAA
Predicted protein sequences of Glyma17g20340
>Glyma17g20340.1   sequence type=predicted peptide   gene model=Glyma17g20340   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MARLTHFVLLFVLLFLSHELLGSEGRNLRQITIQSPDATKAMSIATKSANAIPSYRSIRSLSGDVEAFRPTTPGHSPGVGH*






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