Report for Sequence Feature Glyma17g19750
Feature Type: gene_model
Chromosome: Gm17
Start: 18041519
stop: 18051233
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma17g19750
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G36945 AT
Annotation by Michelle Graham. TAIR10: PLC-like phosphodiesterases superfamily protein | chr4:17420098-17422047 REVERSE LENGTH=408
SoyBase E_val: 2.00E-171 ISS
UniRef100_G7JK30 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: PI-PLC X domain-containing protein n=1 Tax=Medicago truncatula RepID=G7JK30_MEDTR
SoyBase E_val: 7.00E-180 ISS
UniRef100_UPI000233E0E9 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233E0E9 related cluster n=1 Tax=unknown RepID=UPI000233E0E9
SoyBase E_val: 0 ISS
Expression Patterns of Glyma17g19750
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma17g19750 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.17g172700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma17g19750
Coding sequences of Glyma17g19750
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma17g19750.2 sequence type=CDS gene model=Glyma17g19750 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAAGAGCCGAGTGGTGGTGGTAGTTCTCGTGTCACTTTGCCTCGTTAATTGCTCATCTAGCATCAAGTTGGGAGAAACTTGTGGTTCCGAGAACAAATGTGATGGTGGTCTTCATTGTGCAACATGTCCGGCAAATGGGAATACTCGCTCTAGATGCACAAGAACTCAACCTACAATCCCTACTTCCAAGGTGAAAGGTTTAGCATTCAATCGATATTCATGGCTGACAACACATAACTCATTCGCTCAATCTGGCATCAAATCTGACACAGGATCTTTTATTATAGCCTCCACAACCCAGGAAGACACAATTGTCCAACAACTCAATAATGGTGTTCGAGGCCTTATGCTAGATATGTATGACTTTAAAAATGATATCTGGTTGTGTCATTCCTTTGGAGGCAATTGTTACGATGTCACTTCATTTAAACCTGCTATAAATGTGCTTAAAGACATCCAATCATTCATGGAAGCAAATCCAACAGAAATTGTGACCATCTTCATTGAAGACTATGTGACATCTCCCCAAGGGCTTACCAAGGTGTTTAATGCTTCTGGGTTGAGAAAGTATTGGTTCCCAGTATCTAGAATGCCTAAGAATGGTGAAGATTGGCCAACTGTCGATGACATGGTTCATCAAAATCAACGTTTGGTCGTTTTCACCTCTAAATCATCTAAAGAAGATTCTGAGGGCATTGCTAACCAATGGAAATATGTAGTAGAAAACCAATATGGAGATGATGGAATGAAAGGTGGTTCTTGTCCAAATCGAGGTGAATCATCAACCATGAACACAAAATCAAAGTCATTGGTTTTGATGAACTACTTTCTCACTAGTGCTAATGCAAGCTCAGCTTGTGCTGACAATTCAACTCCATTAGTTAACATGTTGAAGACTTGCCATAATGCTTCCAGCGGTCGATGGCCAAATTTCATTGCTGTTGATTTTTACCAGAGGAGTGATGGAGGAGGAGCCCCTGAAGCAGTTGATGTAGCAAATGGTCACTTAACTTGCGGATGTGACAACATTTCCTATTGCAGGCCAAATGCCACATATGGCACATGTGATGTGCCACCAATTTCTCCACCGCCACCTGCTGTTGCTCCCCCAACCATCGTAGAAGAAGCAAGCCATCAGCCGGTACAAGAGGAATTTCATGTGGACACCCCTCTAAAGTTGGTGAAGTTTTTATGGACATTGATGCATAATATGTCTTCTCAGAATCAAGATTGA
Predicted protein sequences of Glyma17g19750
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma17g19750.2 sequence type=predicted peptide gene model=Glyma17g19750 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MKSRVVVVVLVSLCLVNCSSSIKLGETCGSENKCDGGLHCATCPANGNTRSRCTRTQPTIPTSKVKGLAFNRYSWLTTHNSFAQSGIKSDTGSFIIASTTQEDTIVQQLNNGVRGLMLDMYDFKNDIWLCHSFGGNCYDVTSFKPAINVLKDIQSFMEANPTEIVTIFIEDYVTSPQGLTKVFNASGLRKYWFPVSRMPKNGEDWPTVDDMVHQNQRLVVFTSKSSKEDSEGIANQWKYVVENQYGDDGMKGGSCPNRGESSTMNTKSKSLVLMNYFLTSANASSACADNSTPLVNMLKTCHNASSGRWPNFIAVDFYQRSDGGGAPEAVDVANGHLTCGCDNISYCRPNATYGTCDVPPISPPPPAVAPPTIVEEASHQPVQEEFHVDTPLKLVKFLWTLMHNMSSQNQD*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
