|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G23420 | AT | Annotation by Michelle Graham. TAIR10: nicotinate phosphoribosyltransferase 2 | chr2:9971819-9974909 FORWARD LENGTH=557 | SoyBase | E_val: 0 | ISS |
GO:0009435 | GO-bp | Annotation by Michelle Graham. GO Biological Process: NAD biosynthetic process | SoyBase | N/A | ISS |
GO:0019358 | GO-bp | Annotation by Michelle Graham. GO Biological Process: nicotinate nucleotide salvage | SoyBase | N/A | ISS |
GO:0019363 | GO-bp | Annotation by Michelle Graham. GO Biological Process: pyridine nucleotide biosynthetic process | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0004516 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: nicotinate phosphoribosyltransferase activity | SoyBase | N/A | ISS |
KOG2511 | KOG | Nicotinic acid phosphoribosyltransferase | JGI | ISS | |
PTHR11098 | Panther | NICOTINATE PHOSPHORIBOSYLTRANSFERASE | JGI | ISS | |
PTHR11098:SF1 | Panther | NICOTINATE PHOSPHORIBOSYLTRANSFERASE-RELATED | JGI | ISS | |
PF04095 | PFAM | Nicotinate phosphoribosyltransferase (NAPRTase) family | JGI | ISS | |
UniRef100_Q6XQM5 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Nicotinate phosphoribosyltransferase-like protein n=1 Tax=Medicago truncatula RepID=Q6XQM5_MEDTR | SoyBase | E_val: 0 | ISS |
UniRef100_UPI000233F098 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233F098 related cluster n=1 Tax=unknown RepID=UPI000233F098 | SoyBase | E_val: 0 | ISS |
Glyma17g19660 not represented in the dataset |
Glyma17g19660 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.17g172500 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma17g19660.1 sequence type=CDS gene model=Glyma17g19660 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAGAGTTGAAGGCCCAGTTGCTGTTGTTCAATTGCTGGAAACACCTTTTGTGAATCTAATTAATTATGCATCTTTAGTTTCTACTAATGCTGCAAGGCATCGTAATGTTGCTGGAAAATCCAAAACTCTACTTGAGTTTGGATTACGAAGGGCTCAGGGGCCTGATGGTGGAGTAGGAGCATCCAAGTACTGCTATATTGGTGGATTTGATGCAACAAGCAATGTTGCAGCAGGAAAGTTATTCGGGATACCCCTTCGTGGTACTCATTCCCATGCCTTTGTTAGTTCATACATGAGCCTTGATGAGATTACAGACAGGTCACTTAACAGAAAAGATGGTTCAAGTACGTGTGATGATTTTGTCAGTCTCGTTCAAACATGGTTGAACAAAATTCAGTTATCAAATGGTGTTTTTGGTGAGACCAATCAAAGTGAGTTGGCTGCATTCACATCATATGCTTTGGCATTTCCTGATGGTTTTCTTGCCCTCGTAGATACATATGATGTTATGAGAAGTGGAATCCCTAATTTCTGTGCAGTTGCATTAGCTCTCAGTGATTTAGGATACAAAGCAGTTGGCATTAGATTGGACTCTGGTGACCTTGCATACTTGTCTTGTGAGGTCAGGAAGTTCTTTTACTCTATTGAGAATGAATTTGGAGTGCCTGGATTTGGGAAGTTGCAAATCACTGCTAGTAATGATCTTAATGAGGAAACATTAGATGCTTTAAACAAACAGGGACATGAGGTTGATGCCTTTGGAATTGGTACATATCTAGTTACATGTTATGCTCAAGCTGCTTTAGGTGTTGTCTTCAAGCTGGTTGAAATAAATAATCAGCCTCGTATCAAACTTTCTGAAGATGTATCAAAGGTCTCTATTCCATGTAAAAAGTGCTGCTATAGATTGTATGGGAAAGAAGGTTATCCCCTGGTGGACATAATGACTGGAGAAAATGAGCCCTCTCCAAAGGTGGGAGAAAGAATCCTGTGCCGTCATCCCTTCCAAGAATCCAAGAGAGCATATGTGGTGCCACAGCGTGTTGAGGAGCTTCTGAGGTGTTACTGGTCTGGGAGTACAGATATTAAGAAAGATACTTTACCAGCTCTAAGAGATATTAGAGAGCGATGCATCAATCAACTTGAGCAAATGCGACCTGACCACATGAGGAGACTTAACCCAACTCCATATAAGGTTAGTGTTAGTGCAAAATTATACGACTTCATTCATTTCCTGTGGCTCAATGAGGCACCAGTTGGGGAGCTACAGTAA
>Glyma17g19660.1 sequence type=predicted peptide gene model=Glyma17g19660 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MRVEGPVAVVQLLETPFVNLINYASLVSTNAARHRNVAGKSKTLLEFGLRRAQGPDGGVGASKYCYIGGFDATSNVAAGKLFGIPLRGTHSHAFVSSYMSLDEITDRSLNRKDGSSTCDDFVSLVQTWLNKIQLSNGVFGETNQSELAAFTSYALAFPDGFLALVDTYDVMRSGIPNFCAVALALSDLGYKAVGIRLDSGDLAYLSCEVRKFFYSIENEFGVPGFGKLQITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGVVFKLVEINNQPRIKLSEDVSKVSIPCKKCCYRLYGKEGYPLVDIMTGENEPSPKVGERILCRHPFQESKRAYVVPQRVEELLRCYWSGSTDIKKDTLPALRDIRERCINQLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||