Glyma17g13840 - SoyBase

SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Notice: fwrite(): Write of 156 bytes failed with errno=28 No space left on device in /var/www/html/include/SeqFeatClass.php on line 369

Warning: Undefined variable $sxsome in /var/www/html/include/SeqFeatClass.php on line 665

Warning: Undefined variable $sstart in /var/www/html/include/SeqFeatClass.php on line 665

Warning: Undefined variable $send in /var/www/html/include/SeqFeatClass.php on line 665

Warning: get_headers(): php_network_getaddresses: getaddrinfo for bar.utoronto.ca failed: Temporary failure in name resolution in /var/www/html/include/SeqFeatClass.php on line 1018

Warning: get_headers(https://bar.utoronto.ca/api/efp_image/efp_soybean/soybean/Absolute/Glyma17g13840): Failed to open stream: php_network_getaddresses: getaddrinfo for bar.utoronto.ca failed: Temporary failure in name resolution in /var/www/html/include/SeqFeatClass.php on line 1018

Warning: Trying to access array offset on false in /var/www/html/include/SeqFeatClass.php on line 1019

Warning: get_headers(): php_network_getaddresses: getaddrinfo for bar.utoronto.ca failed: Temporary failure in name resolution in /var/www/html/include/SeqFeatClass.php on line 1020

Warning: get_headers(https://bar.utoronto.ca/api/efp_image/efp_soybean/soybean_severin/Absolute/Glyma17g13840): Failed to open stream: php_network_getaddresses: getaddrinfo for bar.utoronto.ca failed: Temporary failure in name resolution in /var/www/html/include/SeqFeatClass.php on line 1020

Warning: Trying to access array offset on false in /var/www/html/include/SeqFeatClass.php on line 1021

Deprecated: preg_match(): Passing null to parameter #2 ($subject) of type string is deprecated in /var/www/html/include/SeqFeatClass.php on line 1025

Deprecated: preg_match(): Passing null to parameter #2 ($subject) of type string is deprecated in /var/www/html/include/SeqFeatClass.php on line 1031

Report for Sequence Feature Glyma17g13840

Feature Type:	gene_model
Chromosome:	Gm17
Start:	10628374
stop:	10634256
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma17g13840

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G24840	AT	Annotation by Michelle Graham. TAIR10: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein transport, Golgi organization; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: COG complex component, COG2 (InterPro:IPR009316); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr4:12796525-12800926 REVERSE LENGTH=756	SoyBase	E_val: 0	ISS
GO:0007030	GO-bp	Annotation by Michelle Graham. GO Biological Process: Golgi organization	SoyBase	N/A	ISS
GO:0015031	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein transport	SoyBase	N/A	ISS
GO:0005773	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: vacuole	SoyBase	N/A	ISS
GO:0005794	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus	SoyBase	N/A	ISS
GO:0016020	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: membrane	SoyBase	N/A	ISS
GO:0003674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: molecular function	SoyBase	N/A	ISS
KOG2307	KOG	Low density lipoprotein receptor	JGI		ISS
PTHR12961	Panther	CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2	JGI		ISS
PF06148	PFAM	COG (conserved oligomeric Golgi) complex component, COG2	JGI		ISS
PF12022	PFAM	Domain of unknown function (DUF3510)	JGI		ISS
UniRef100_G7JLF2	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Conserved oligomeric Golgi complex subunit n=1 Tax=Medicago truncatula RepID=G7JLF2_MEDTR	SoyBase	E_val: 0	ISS
UniRef100_I1MUP1	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MUP1_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma17g13840

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma17g13840 not represented in the dataset	Glyma17g13840 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma17g13840

Paralog	Evidence	Comments
Glyma05g03260	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma17g13840 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.17g129100	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma17g13840

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma17g13840

Limit To All Plant Sequences

>Glyma17g13840.2   sequence type=transcript   gene model=Glyma17g13840   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TCACACAAGTTTATTTCTTCATCTTTTATACATTTACTTTACTTTATTCGAGAGTTGGAGAATAGATTAGAGAGATAAGAGGGACACTCCGGTAAGCTTACGGCTTCCGTGCAGTGCGAGCGAGCGAACGAGAAGTTGTAGTTATTGATTTCAATTTCCAAGTCCCAACCATAAACAAACAGACAAATCCATTTCCTCAACAAAGAAACACACACCAAACCGCGCGAATCAAAAGATGGCGGATCCGATCCCGGCGCCACCAAGATCCGCCACGGACCTCTTCTCGGATCCTCTCGACGCCCACCCGCTGTGGTTCAAACCGGCGTCGTTTCTCTCCCCCGACTTCGACTCCGAATCCTACATCTCGGAGCTCCGAACCTTCGTCCCCTTCGACACGCTCCGCTCCGAGCTAAACAGCTACCTATCCTCCCTCAACCACGAGCTCATCGACCTCATCAACCGCGACTACGCCGACTTCGTCAACCTCAGCACCAAGCTCGTCGACGTCGACGCCGTCGTCGTCCGAATGCGGGCCCCGCTCGTCGAGCTCCGCGACAAGATCGAGCAGTTCAGAGGATCCGTCGAGGTCTCGCTTGTCGCCATCAAGAATCGCTTGAGGCAGAGATCTGAGGTGGCCTCCGCTAGAGAGACTTTAGAGCTTCTTCTTGATGCGTTTCACGTCGTTTCTAAGGTTGAGAAGCTAATAAAAGAGCTGCCCAGTGTACCCACCGATTGGTCAAATGGAGATGTAAATTTGTCAGAGAGGAATAACTTAAGCAATGGAGTTTCTGCGCAGCATGTTGAGAATGAAATGATTATCAGAGAGACTCAAAGCATGCTGCTGGAAAGAATTGCCAGTGAGATGAACCGACTAAAGTTCTATGTGACACATGCAAAGAACCTTCCTTTTATTGAGAATATGGAGAAGAGGATTCAAAATGCAAGTGTAACAGTAGATGCAAGCTTGGGACATTGCTTTGTAAATGGTTTGGAGCACCGAGATGCAACTGCAATTTTCAATTGCTTACGTGCATATGCTGCTATAGATAACACTAAGAGTGCAGAAGAAATTTTTCGAGTTACTGTTGTGGCTCCATTGATACAGAAGATTATCCCACATGGATCATCAGCTGTGGTTGCTGGATCATTTGGGGATGGTCTAGAAAATGATTATCAACTAATTAAGGAGTTCATTGATAAAGACTGTAAATTTTTATTGGAAATTTCTTCAGCTGAAAATTCAGGTTTGCATGTCTTTGACTTCTTAGCCAATTCAATCCTTAAGGAGGTTCTCTCTGCAATTCAGAAGGGAAAGCCAGGTGCATTTTCTCCCGGAAGGCCAACAGAGTTCTTGAAAAATTACAAATCAAGCTTAGATTTCTTGGCTTTTCTAGAAGGCTACTGTCCATCCAGATCTGCTGTTGCTAAATTTCGATCTGAAGCAATTTATACAGAATTCATGAAGCAATGGAACATTGGAGTATATTTCTCTTTGAGGTTTCAGGAAATAGCAGGGTCACTAGATTCTGTGCTTACAACATCCAGTCTTGTCCCTGTTCAAAATTCAGATGCTGGCGAAGCAAATTATCAAGGTTTAACATTAAAGCAAAGTGTTACTTTGTTGGAGAGTTTGAGATCATGCTGGAGAGAAGATGTTCTTGTCCTTTCTTGTTCTGACAGATTCCTTCGGCTATCCTTGCAGCTTCTTTCTAGATACTCAAGTTGGCTGTCTTCTGGACTGACTGCTCGCAAAAACCATAACACAAGCACTAGCCCTGGGTGTGAATGGGCCGTTTCAGCTGTCATAGATGACTTTATTTTTGTTATTCATGATATAAGATATTTGGAGGAGCAGGTTCATGGTGATTACCTTCAACATGTGCTTCAGCTTTTGTCTTCATGCTCCCCTGATGTTCTGGAATCAATAAGGCAGAGCATTTTACTGAGTGGTCAATCATTAAAATCTGTAGAACCGTTAGTCATTAAAGCAGTGGTGGAGTCACTAGTTGAAAAGTCAGTTGAGGACTTAAGACAAATGAAGGGGATAACAGCAACCTATAGGATGACTAATAAACCTCTACCTGTGAGGCATTCACCATATATTTCAGGGGTATTACGTCCCCTTAAGGCTTTTTTGGGTGGGGAGAGAGCTACAAGATATTTGGTCAGTGAAACTAGGAATGAAATACTCCTCTGTGCTGCAACTGAGATTACTGACCGTTATTATGAATTAGCTGCTGACCTTGTTAGCGTGGTAAGTGTCCAAATCTAAATTGCGTTGATGGAATTTTTCGATCTCTTGGATTCTCTGTTAGAAATTATTTTATTGAACTTTTTATCACTGATCAGGCAAGAAAGACAGAGTCTTCACTCCAGAAAATTAGGCAGAGTGCACAAAGACGAGCTGGAGCCAGTTCAGATATCTTAGATAATAATGTGTCTGATACTGATAAAATCTGTATGCAGTTGTTTCTTGATATTCAGGAGTATGCCCGGAACCTCTCTGCACTGGGGGTTGAAGCAGCCAATATTGCATCCTACCGTTCATTATGGCAATGTGTGGCTCCTGCAGATAGGCAAAACACAATTAATCTCTAAGAGTTTGCTCCTATGGAGTTAAAGCGGCTTGTAGATTGTTTTCCTCTGGGTCTAGAGTTTCCTTTTGTAACTTAATTTTGAAATCCATTATATAGCTTTACACAATAATCACAGGTTATCATGGTTCTTAAAAGGGAAGAAAAAAATTATTTTGCTCGTAACTGTTATCTTTAAGGTTCTCTGTAGTTACTACGATAGCAGATGTGATATTCTTTGTGGCATTGTGTTTCTTATCATCATTCTTTTAAATTGCTTTTTCAAACTTACTGCCAATTATTTTTTTATGGTCT

>Glyma17g13840.3   sequence type=transcript   gene model=Glyma17g13840   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TCACACAAGTTTATTTCTTCATCTTTTATACATTTACTTTACTTTATTCGAGAGTTGGAGAATAGATTAGAGAGATAAGAGGGACACTCCGGTAAGCTTACGGCTTCCGTGCAGTGCGAGCGAGCGAACGAGAAGTTGTAGTTATTGATTTCAATTTCCAAGTCCCAACCATAAACAAACAGACAAATCCATTTCCTCAACAAAGAAACACACACCAAACCGCGCGAATCAAAAGATGGCGGATCCGATCCCGGCGCCACCAAGATCCGCCACGGACCTCTTCTCGGATCCTCTCGACGCCCACCCGCTGTGGTTCAAACCGGCGTCGTTTCTCTCCCCCGACTTCGACTCCGAATCCTACATCTCGGAGCTCCGAACCTTCGTCCCCTTCGACACGCTCCGCTCCGAGCTAAACAGCTACCTATCCTCCCTCAACCACGAGCTCATCGACCTCATCAACCGCGACTACGCCGACTTCGTCAACCTCAGCACCAAGCTCGTCGACGTCGACGCCGTCGTCGTCCGAATGCGGGCCCCGCTCGTCGAGCTCCGCGACAAGATCGAGCAGTTCAGAGGATCCGTCGAGGTCTCGCTTGTCGCCATCAAGAATCGCTTGAGGCAGAGATCTGAGGTGGCCTCCGCTAGAGAGACTTTAGAGCTTCTTCTTGATGCGTTTCACGTCGTTTCTAAGGTTGAGAAGCTAATAAAAGAGCTGCCCAGTGTACCCACCGATTGGTCAAATGGAGATGTAAATTTGTCAGAGAGGAATAACTTAAGCAATGGAGTTTCTGCGCAGCATGTTGAGAATGAAATGATTATCAGAGAGACTCAAAGCATGCTGCTGGAAAGAATTGCCAGTGAGATGAACCGACTAAAGTTCTATGTGACACATGCAAAGTACAGAACCTTCCTTTTATTGAGAATATGGAGAAGAGGATTCAAAATGCAAGTGTAACAGTAGATGCAAGCTTGGGACATTGCTTTGTAAATGGTTTGGAGCACCGAGATGCAACTGCAATTTTCAATTGCTTACGTGCATATGCTGCTATAGATAACACTAAGAGTGCAGAAGAAATTTTTCGAGTTACTGTTGTGGCTCCATTGATACAGAAGATTATCCCACATGGATCATCAGCTGTGGTTGCTGGATCATTTGGGGATGGTCTAGAAAATGATTATCAACTAATTAAGGAGTTCATTGATAAAGACTGTAAATTTTTATTGGAAATTTCTTCAGCTGAAAATTCAGGTTTGCATGTCTTTGACTTCTTAGCCAATTCAATCCTTAAGGAGGTTCTCTCTGCAATTCAGAAGGGAAAGCCAGGTGCATTTTCTCCCGGAAGGCCAACAGAGTTCTTGAAAAATTACAAATCAAGCTTAGATTTCTTGGCTTTTCTAGAAGGCTACTGTCCATCCAGATCTGCTGTTGCTAAATTTCGATCTGAAGCAATTTATACAGAATTCATGAAGCAATGGAACATTGGAGTATATTTCTCTTTGAGGTTTCAGGAAATAGCAGGGTCACTAGATTCTGTGCTTACAACATCCAGTCTTGTCCCTGTTCAAAATTCAGATGCTGGCGAAGCAAATTATCAAGGTTTAACATTAAAGCAAAGTGTTACTTTGTTGGAGAGTTTGAGATCATGCTGGAGAGAAGATGTTCTTGTCCTTTCTTGTTCTGACAGATTCCTTCGGCTATCCTTGCAGCTTCTTTCTAGATACTCAAGTTGGCTGTCTTCTGGACTGACTGCTCGCAAAAACCATAACACAAGCACTAGCCCTGGGTGTGAATGGGCCGTTTCAGCTGTCATAGATGACTTTATTTTTGTTATTCATGATATAAGATATTTGGAGGAGCAGGTTCATGGTGATTACCTTCAACATGTGCTTCAGCTTTTGTCTTCATGCTCCCCTGATGTTCTGGAATCAATAAGGCAGAGCATTTTACTGAGTGGTCAATCATTAAAATCTGTAGAACCGTTAGTCATTAAAGCAGTGGTGGAGTCACTAGTTGAAAAGTCAGTTGAGGACTTAAGACAAATGAAGGGGATAACAGCAACCTATAGGATGACTAATAAACCTCTACCTGTGAGGCATTCACCATATATTTCAGGGGTATTACGTCCCCTTAAGGCTTTTTTGGGTGGGGAGAGAGCTACAAGATATTTGGTCAGTGAAACTAGGAATGAAATACTCCTCTGTGCTGCAACTGAGATTACTGACCGTTATTATGAATTAGCTGCTGACCTTGTTAGCGTGGCAAGAAAGACAGAGTCTTCACTCCAGAAAATTAGGCAGAGTGCACAAAGACGAGCTGGAGCCAGTTCAGATATCTTAGATAATAATGTGTCTGATACTGATAAAATCTGTATGCAGTTGTTTCTTGATATTCAGGAGTATGCCCGGAACCTCTCTGCACTGGGGGTTGAAGCAGCCAATATTGCATCCTACCGTTCATTATGGCAATGTGTGGCTCCTGCAGATAGGCAAAACACAATTAATCTCTAAGAGTTTGCTCCTATGGAGTTAAAGCGGCTTGTAGATTGTTTTCCTCTGGGTCTAGAGTTTCCTTTTGTAACTTAATTTTGAAATCCATTATATAGCTTTACACAATAATCACAGGTTATCATGGTTCTTAAAAGGGAAGAAAAAAATTATTTTGCTCGTAACTGTTATCTTTAAGGTTCTCTGTAGTTACTACGATAGCAGATGTGATATTCTTTGTGGCATTGTGTTTCTTATCATCATTCTTTTAAATTGCTTTTTCAAACTTACTGCCAATTATTTTTTTATGGTCT

Coding sequences of Glyma17g13840

Limit To All Plant Sequences

>Glyma17g13840.1   sequence type=CDS   gene model=Glyma17g13840   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCGGATCCGATCCCGGCGCCACCAAGATCCGCCACGGACCTCTTCTCGGATCCTCTCGACGCCCACCCGCTGTGGTTCAAACCGGCGTCGTTTCTCTCCCCCGACTTCGACTCCGAATCCTACATCTCGGAGCTCCGAACCTTCGTCCCCTTCGACACGCTCCGCTCCGAGCTAAACAGCTACCTATCCTCCCTCAACCACGAGCTCATCGACCTCATCAACCGCGACTACGCCGACTTCGTCAACCTCAGCACCAAGCTCGTCGACGTCGACGCCGTCGTCGTCCGAATGCGGGCCCCGCTCGTCGAGCTCCGCGACAAGATCGAGCAGTTCAGAGGATCCGTCGAGGTCTCGCTTGTCGCCATCAAGAATCGCTTGAGGCAGAGATCTGAGGTGGCCTCCGCTAGAGAGACTTTAGAGCTTCTTCTTGATGCGTTTCACGTCGTTTCTAAGGTTGAGAAGCTAATAAAAGAGCTGCCCAGTGTACCCACCGATTGGTCAAATGGAGATGTAAATTTGTCAGAGAGGAATAACTTAAGCAATGGAGTTTCTGCGCAGCATGTTGAGAATGAAATGATTATCAGAGAGACTCAAAGCATGCTGCTGGAAAGAATTGCCAGTGAGATGAACCGACTAAAGTTCTATGTGACACATGCAAAGAACCTTCCTTTTATTGAGAATATGGAGAAGAGGATTCAAAATGCAAGTGTAACAGTAGATGCAAGCTTGGGACATTGCTTTGTAAATGGTTTGGAGCACCGAGATGCAACTGCAATTTTCAATTGCTTACGTGCATATGCTGCTATAGATAACACTAAGAGTGCAGAAGAAATTTTTCGAGTTACTGTTGTGGCTCCATTGATACAGAAGATTATCCCACATGGATCATCAGCTGTGGTTGCTGGATCATTTGGGGATGGTCTAGAAAATGATTATCAACTAATTAAGGAGTTCATTGATAAAGACTGTAAATTTTTATTGGAAATTTCTTCAGCTGAAAATTCAGGTTTGCATGTCTTTGACTTCTTAGCCAATTCAATCCTTAAGGAGGTTCTCTCTGCAATTCAGAAGGGAAAGCCAGGTGCATTTTCTCCCGGAAGGCCAACAGAGTTCTTGAAAAATTACAAATCAAGCTTAGATTTCTTGGCTTTTCTAGAAGGCTACTGTCCATCCAGATCTGCTGTTGCTAAATTTCGATCTGAAGCAATTTATACAGAATTCATGAAGCAATGGAACATTGGAGTATATTTCTCTTTGAGGTTTCAGGAAATAGCAGGGTCACTAGATTCTGTGCTTACAACATCCAGTCTTGTCCCTGTTCAAAATTCAGATGCTGGCGAAGCAAATTATCAAGGTTTAACATTAAAGCAAAGTGTTACTTTGTTGGAGAGTTTGAGATCATGCTGGAGAGAAGATGTTCTTGTCCTTTCTTGTTCTGACAGATTCCTTCGGCTATCCTTGCAGCTTCTTTCTAGATACTCAAGTTGGCTGTCTTCTGGACTGACTGCTCGCAAAAACCATAACACAAGCACTAGCCCTGGGTGTGAATGGGCCGTTTCAGCTGTCATAGATGACTTTATTTTTGTTATTCATGATATAAGATATTTGGAGGAGCAGGTTCATGGTGATTACCTTCAACATGTGCTTCAGCTTTTGTCTTCATGCTCCCCTGATGTTCTGGAATCAATAAGGCAGAGCATTTTACTGAGTGGTCAATCATTAAAATCTGTAGAACCGTTAGTCATTAAAGCAGTGGTGGAGTCACTAGTTGAAAAGTCAGTTGAGGACTTAAGACAAATGAAGGGGATAACAGCAACCTATAGGATGACTAATAAACCTCTACCTGTGAGGCATTCACCATATATTTCAGGGGTATTACGTCCCCTTAAGGCTTTTTTGGGTGGGGAGAGAGCTACAAGATATTTGGTCAGTGAAACTAGGAATGAAATACTCCTCTGTGCTGCAACTGAGATTACTGACCGTTATTATGAATTAGCTGCTGACCTTGTTAGCGTGGCAAGAAAGACAGAGTCTTCACTCCAGAAAATTAGGCAGAGTGCACAAAGACGAGCTGGAGCCAGTTCAGATATCTTAGATAATAATGTGTCTGATACTGATAAAATCTGTATGCAGTTGTTTCTTGATATTCAGGAGTATGCCCGGAACCTCTCTGCACTGGGGGTTGAAGCAGCCAATATTGCATCCTACCGTTCATTATGGCAATGTGTGGCTCCTGCAGATAGGCAAAACACAATTAATCTCTAA

>Glyma17g13840.2   sequence type=CDS   gene model=Glyma17g13840   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCGGATCCGATCCCGGCGCCACCAAGATCCGCCACGGACCTCTTCTCGGATCCTCTCGACGCCCACCCGCTGTGGTTCAAACCGGCGTCGTTTCTCTCCCCCGACTTCGACTCCGAATCCTACATCTCGGAGCTCCGAACCTTCGTCCCCTTCGACACGCTCCGCTCCGAGCTAAACAGCTACCTATCCTCCCTCAACCACGAGCTCATCGACCTCATCAACCGCGACTACGCCGACTTCGTCAACCTCAGCACCAAGCTCGTCGACGTCGACGCCGTCGTCGTCCGAATGCGGGCCCCGCTCGTCGAGCTCCGCGACAAGATCGAGCAGTTCAGAGGATCCGTCGAGGTCTCGCTTGTCGCCATCAAGAATCGCTTGAGGCAGAGATCTGAGGTGGCCTCCGCTAGAGAGACTTTAGAGCTTCTTCTTGATGCGTTTCACGTCGTTTCTAAGGTTGAGAAGCTAATAAAAGAGCTGCCCAGTGTACCCACCGATTGGTCAAATGGAGATGTAAATTTGTCAGAGAGGAATAACTTAAGCAATGGAGTTTCTGCGCAGCATGTTGAGAATGAAATGATTATCAGAGAGACTCAAAGCATGCTGCTGGAAAGAATTGCCAGTGAGATGAACCGACTAAAGTTCTATGTGACACATGCAAAGAACCTTCCTTTTATTGAGAATATGGAGAAGAGGATTCAAAATGCAAGTGTAACAGTAGATGCAAGCTTGGGACATTGCTTTGTAAATGGTTTGGAGCACCGAGATGCAACTGCAATTTTCAATTGCTTACGTGCATATGCTGCTATAGATAACACTAAGAGTGCAGAAGAAATTTTTCGAGTTACTGTTGTGGCTCCATTGATACAGAAGATTATCCCACATGGATCATCAGCTGTGGTTGCTGGATCATTTGGGGATGGTCTAGAAAATGATTATCAACTAATTAAGGAGTTCATTGATAAAGACTGTAAATTTTTATTGGAAATTTCTTCAGCTGAAAATTCAGGTTTGCATGTCTTTGACTTCTTAGCCAATTCAATCCTTAAGGAGGTTCTCTCTGCAATTCAGAAGGGAAAGCCAGGTGCATTTTCTCCCGGAAGGCCAACAGAGTTCTTGAAAAATTACAAATCAAGCTTAGATTTCTTGGCTTTTCTAGAAGGCTACTGTCCATCCAGATCTGCTGTTGCTAAATTTCGATCTGAAGCAATTTATACAGAATTCATGAAGCAATGGAACATTGGAGTATATTTCTCTTTGAGGTTTCAGGAAATAGCAGGGTCACTAGATTCTGTGCTTACAACATCCAGTCTTGTCCCTGTTCAAAATTCAGATGCTGGCGAAGCAAATTATCAAGGTTTAACATTAAAGCAAAGTGTTACTTTGTTGGAGAGTTTGAGATCATGCTGGAGAGAAGATGTTCTTGTCCTTTCTTGTTCTGACAGATTCCTTCGGCTATCCTTGCAGCTTCTTTCTAGATACTCAAGTTGGCTGTCTTCTGGACTGACTGCTCGCAAAAACCATAACACAAGCACTAGCCCTGGGTGTGAATGGGCCGTTTCAGCTGTCATAGATGACTTTATTTTTGTTATTCATGATATAAGATATTTGGAGGAGCAGGTTCATGGTGATTACCTTCAACATGTGCTTCAGCTTTTGTCTTCATGCTCCCCTGATGTTCTGGAATCAATAAGGCAGAGCATTTTACTGAGTGGTCAATCATTAAAATCTGTAGAACCGTTAGTCATTAAAGCAGTGGTGGAGTCACTAGTTGAAAAGTCAGTTGAGGACTTAAGACAAATGAAGGGGATAACAGCAACCTATAGGATGACTAATAAACCTCTACCTGTGAGGCATTCACCATATATTTCAGGGGTATTACGTCCCCTTAAGGCTTTTTTGGGTGGGGAGAGAGCTACAAGATATTTGGTCAGTGAAACTAGGAATGAAATACTCCTCTGTGCTGCAACTGAGATTACTGACCGTTATTATGAATTAGCTGCTGACCTTGTTAGCGTGGTAAGTGTCCAAATCTAA

>Glyma17g13840.3   sequence type=CDS   gene model=Glyma17g13840   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGAAGAGGATTCAAAATGCAAGTGTAACAGTAGATGCAAGCTTGGGACATTGCTTTGTAAATGGTTTGGAGCACCGAGATGCAACTGCAATTTTCAATTGCTTACGTGCATATGCTGCTATAGATAACACTAAGAGTGCAGAAGAAATTTTTCGAGTTACTGTTGTGGCTCCATTGATACAGAAGATTATCCCACATGGATCATCAGCTGTGGTTGCTGGATCATTTGGGGATGGTCTAGAAAATGATTATCAACTAATTAAGGAGTTCATTGATAAAGACTGTAAATTTTTATTGGAAATTTCTTCAGCTGAAAATTCAGGTTTGCATGTCTTTGACTTCTTAGCCAATTCAATCCTTAAGGAGGTTCTCTCTGCAATTCAGAAGGGAAAGCCAGGTGCATTTTCTCCCGGAAGGCCAACAGAGTTCTTGAAAAATTACAAATCAAGCTTAGATTTCTTGGCTTTTCTAGAAGGCTACTGTCCATCCAGATCTGCTGTTGCTAAATTTCGATCTGAAGCAATTTATACAGAATTCATGAAGCAATGGAACATTGGAGTATATTTCTCTTTGAGGTTTCAGGAAATAGCAGGGTCACTAGATTCTGTGCTTACAACATCCAGTCTTGTCCCTGTTCAAAATTCAGATGCTGGCGAAGCAAATTATCAAGGTTTAACATTAAAGCAAAGTGTTACTTTGTTGGAGAGTTTGAGATCATGCTGGAGAGAAGATGTTCTTGTCCTTTCTTGTTCTGACAGATTCCTTCGGCTATCCTTGCAGCTTCTTTCTAGATACTCAAGTTGGCTGTCTTCTGGACTGACTGCTCGCAAAAACCATAACACAAGCACTAGCCCTGGGTGTGAATGGGCCGTTTCAGCTGTCATAGATGACTTTATTTTTGTTATTCATGATATAAGATATTTGGAGGAGCAGGTTCATGGTGATTACCTTCAACATGTGCTTCAGCTTTTGTCTTCATGCTCCCCTGATGTTCTGGAATCAATAAGGCAGAGCATTTTACTGAGTGGTCAATCATTAAAATCTGTAGAACCGTTAGTCATTAAAGCAGTGGTGGAGTCACTAGTTGAAAAGTCAGTTGAGGACTTAAGACAAATGAAGGGGATAACAGCAACCTATAGGATGACTAATAAACCTCTACCTGTGAGGCATTCACCATATATTTCAGGGGTATTACGTCCCCTTAAGGCTTTTTTGGGTGGGGAGAGAGCTACAAGATATTTGGTCAGTGAAACTAGGAATGAAATACTCCTCTGTGCTGCAACTGAGATTACTGACCGTTATTATGAATTAGCTGCTGACCTTGTTAGCGTGGCAAGAAAGACAGAGTCTTCACTCCAGAAAATTAGGCAGAGTGCACAAAGACGAGCTGGAGCCAGTTCAGATATCTTAGATAATAATGTGTCTGATACTGATAAAATCTGTATGCAGTTGTTTCTTGATATTCAGGAGTATGCCCGGAACCTCTCTGCACTGGGGGTTGAAGCAGCCAATATTGCATCCTACCGTTCATTATGGCAATGTGTGGCTCCTGCAGATAGGCAAAACACAATTAATCTCTAA

Predicted protein sequences of Glyma17g13840

Limit To All Plant Sequences

>Glyma17g13840.1   sequence type=predicted peptide   gene model=Glyma17g13840   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MADPIPAPPRSATDLFSDPLDAHPLWFKPASFLSPDFDSESYISELRTFVPFDTLRSELNSYLSSLNHELIDLINRDYADFVNLSTKLVDVDAVVVRMRAPLVELRDKIEQFRGSVEVSLVAIKNRLRQRSEVASARETLELLLDAFHVVSKVEKLIKELPSVPTDWSNGDVNLSERNNLSNGVSAQHVENEMIIRETQSMLLERIASEMNRLKFYVTHAKNLPFIENMEKRIQNASVTVDASLGHCFVNGLEHRDATAIFNCLRAYAAIDNTKSAEEIFRVTVVAPLIQKIIPHGSSAVVAGSFGDGLENDYQLIKEFIDKDCKFLLEISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTEFLKNYKSSLDFLAFLEGYCPSRSAVAKFRSEAIYTEFMKQWNIGVYFSLRFQEIAGSLDSVLTTSSLVPVQNSDAGEANYQGLTLKQSVTLLESLRSCWREDVLVLSCSDRFLRLSLQLLSRYSSWLSSGLTARKNHNTSTSPGCEWAVSAVIDDFIFVIHDIRYLEEQVHGDYLQHVLQLLSSCSPDVLESIRQSILLSGQSLKSVEPLVIKAVVESLVEKSVEDLRQMKGITATYRMTNKPLPVRHSPYISGVLRPLKAFLGGERATRYLVSETRNEILLCAATEITDRYYELAADLVSVARKTESSLQKIRQSAQRRAGASSDILDNNVSDTDKICMQLFLDIQEYARNLSALGVEAANIASYRSLWQCVAPADRQNTINL*

>Glyma17g13840.2   sequence type=predicted peptide   gene model=Glyma17g13840   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MADPIPAPPRSATDLFSDPLDAHPLWFKPASFLSPDFDSESYISELRTFVPFDTLRSELNSYLSSLNHELIDLINRDYADFVNLSTKLVDVDAVVVRMRAPLVELRDKIEQFRGSVEVSLVAIKNRLRQRSEVASARETLELLLDAFHVVSKVEKLIKELPSVPTDWSNGDVNLSERNNLSNGVSAQHVENEMIIRETQSMLLERIASEMNRLKFYVTHAKNLPFIENMEKRIQNASVTVDASLGHCFVNGLEHRDATAIFNCLRAYAAIDNTKSAEEIFRVTVVAPLIQKIIPHGSSAVVAGSFGDGLENDYQLIKEFIDKDCKFLLEISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTEFLKNYKSSLDFLAFLEGYCPSRSAVAKFRSEAIYTEFMKQWNIGVYFSLRFQEIAGSLDSVLTTSSLVPVQNSDAGEANYQGLTLKQSVTLLESLRSCWREDVLVLSCSDRFLRLSLQLLSRYSSWLSSGLTARKNHNTSTSPGCEWAVSAVIDDFIFVIHDIRYLEEQVHGDYLQHVLQLLSSCSPDVLESIRQSILLSGQSLKSVEPLVIKAVVESLVEKSVEDLRQMKGITATYRMTNKPLPVRHSPYISGVLRPLKAFLGGERATRYLVSETRNEILLCAATEITDRYYELAADLVSVVSVQI*

>Glyma17g13840.3   sequence type=predicted peptide   gene model=Glyma17g13840   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEKRIQNASVTVDASLGHCFVNGLEHRDATAIFNCLRAYAAIDNTKSAEEIFRVTVVAPLIQKIIPHGSSAVVAGSFGDGLENDYQLIKEFIDKDCKFLLEISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTEFLKNYKSSLDFLAFLEGYCPSRSAVAKFRSEAIYTEFMKQWNIGVYFSLRFQEIAGSLDSVLTTSSLVPVQNSDAGEANYQGLTLKQSVTLLESLRSCWREDVLVLSCSDRFLRLSLQLLSRYSSWLSSGLTARKNHNTSTSPGCEWAVSAVIDDFIFVIHDIRYLEEQVHGDYLQHVLQLLSSCSPDVLESIRQSILLSGQSLKSVEPLVIKAVVESLVEKSVEDLRQMKGITATYRMTNKPLPVRHSPYISGVLRPLKAFLGGERATRYLVSETRNEILLCAATEITDRYYELAADLVSVARKTESSLQKIRQSAQRRAGASSDILDNNVSDTDKICMQLFLDIQEYARNLSALGVEAANIASYRSLWQCVAPADRQNTINL*

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain