Glyma17g10550 - SoyBase

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Report for Sequence Feature Glyma17g10550

Feature Type:	gene_model
Chromosome:	Gm17
Start:	7932075
stop:	7932898
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Expression Patterns of Glyma17g10550

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma17g10550 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.17g097300	Wm82.a2.v1	IGC	As supplied by JGI
Glyma17g10541	Wm82.a1.v1.1	IGC	Correspondences based on a combination of genome sequence coordinate overlap (fjoin) and sequence similarity (ungapped blastn)

References for Glyma17g10550

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma17g10550

Limit To All Plant Sequences

>Glyma17g10550.1   sequence type=CDS   gene model=Glyma17g10550   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGGTATTGTATGATTCTTATCTACCAACTACTACCTTTTAATAAAAAAATTGAAAAATCTTTTGGAAGTAATATTAATGTATTTTTTATTTTAAAAGAAAGCATAAAAGGAAGGAAAATAGTTTATGTAACTGGAAGAAGCAGCCACACAATGTTAGTTCTGCAAGCAAAGTGA

Predicted protein sequences of Glyma17g10550

Limit To All Plant Sequences

>Glyma17g10550.1   sequence type=predicted peptide   gene model=Glyma17g10550   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MRYCMILIYQLLPFNKKIEKSFGSNINVFFILKESIKGRKIVYVTGRSSHTMLVLQAK*

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