Glyma17g10305 - SoyBase

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Report for Sequence Feature Glyma17g10305

Feature Type:	gene_model
Chromosome:	Gm17
Start:	7712542
stop:	7713696
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma17g10305

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
UniRef100_A5BDR0	UniRef	Annotation by Michelle Graham. Best UniRef hit: Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BDR0_VITVI	SoyBase	E_val: 2.00E-50	ISS
UniRef100_Q4ABN5	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: 01P13-2 n=1 Tax=Brassica rapa subsp. pekinensis RepID=Q4ABN5_BRARP	SoyBase	E_val: 4.00E-20	ISS

Expression Patterns of Glyma17g10305

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma17g10305 not represented in the dataset	Glyma17g10305 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma17g10305 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.17g095100	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma17g10305

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma17g10305

Limit To All Plant Sequences

>Glyma17g10305.1   sequence type=CDS   gene model=Glyma17g10305   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGCCCACATCTTGCTGAGATTTTCAGCTATTCAGATTCTGCTACGCAACTATGGACCACAGTTCGTGATATGTATGGTCAACAATATAACTCTGCTCGCATCTTTGAACTCCAACAAGACATTGTCAACTTGCAACAATCAGGTAAACCCTTTGTTCAATTACTTGGCAATCTAAAAAGAAGGTGGAATGAACTTGAGGTGCACCGTCCACACACTGTTGATGCTGCTATACTTTGTAAATGTGTTGAAGAAGACAAAATTTTCCAATTGCTAGCAAGTCCTGGTCCTGAATATGAAGATCTTCATAGTCATATTCTTATGTCCCCGGAACTCCTGTCATTATTGTTTGTCTGCTCTACGATTCAAAGAGAAGAAGCCAGGAAGAAAGTCATGAATGCAAAAAATAAGTCAAAGCTATTCGACACTCATGCCTACACTTCCATTTATATAGTTTATCTTGACAGTAATTTTACTTCATGTGGAACTTCAACATTTTTCCTTTTGCTCAGGATTACCCCGCCATGTGAGTACACTCATTCTATCTAG

Predicted protein sequences of Glyma17g10305

Limit To All Plant Sequences

>Glyma17g10305.1   sequence type=predicted peptide   gene model=Glyma17g10305   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSPHLAEIFSYSDSATQLWTTVRDMYGQQYNSARIFELQQDIVNLQQSGKPFVQLLGNLKRRWNELEVHRPHTVDAAILCKCVEEDKIFQLLASPGPEYEDLHSHILMSPELLSLLFVCSTIQREEARKKVMNAKNKSKLFDTHAYTSIYIVYLDSNFTSCGTSTFFLLLRITPPCEYTHSI*

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