|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G33320 | AT | Annotation by Michelle Graham. TAIR10: Glucose-6-phosphate/phosphate translocator-related | chr5:12588950-12591408 FORWARD LENGTH=408 | SoyBase | E_val: 1.00E-171 | ISS |
GO:0006810 | GO-bp | Annotation by Michelle Graham. GO Biological Process: transport | SoyBase | N/A | ISS |
GO:0015713 | GO-bp | Annotation by Michelle Graham. GO Biological Process: phosphoglycerate transport | SoyBase | N/A | ISS |
GO:0015714 | GO-bp | Annotation by Michelle Graham. GO Biological Process: phosphoenolpyruvate transport | SoyBase | N/A | ISS |
GO:0005739 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0009528 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plastid inner membrane | SoyBase | N/A | ISS |
GO:0009536 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plastid | SoyBase | N/A | ISS |
GO:0009941 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast envelope | SoyBase | N/A | ISS |
GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
GO:0016021 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane | SoyBase | N/A | ISS |
GO:0005215 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transporter activity | SoyBase | N/A | ISS |
GO:0015120 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: phosphoglycerate transmembrane transporter activity | SoyBase | N/A | ISS |
GO:0015121 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: phosphoenolpyruvate:phosphate antiporter activity | SoyBase | N/A | ISS |
GO:0015297 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: antiporter activity | SoyBase | N/A | ISS |
KOG1441 | KOG | Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter | JGI | ISS | |
PTHR11132 | Panther | SOLUTE CARRIER FAMILY 35 | JGI | ISS | |
PF00892 | PFAM | EamA-like transporter family | JGI | ISS | |
PF03151 | PFAM | Triose-phosphate Transporter family | JGI | ISS | |
UniRef100_B9RB11 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Triose phosphate/phosphate translocator, non-green plastid, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RB11_RICCO | SoyBase | E_val: 0 | ISS |
UniRef100_I1MTG4 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MTG4_SOYBN | SoyBase | E_val: 0 | ISS |
Glyma17g09630 not represented in the dataset |
Glyma17g09630 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.17g088500 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma17g09630.1 sequence type=CDS gene model=Glyma17g09630 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGCAGAGCACAGTTTTCTCTCTCTCCCCTTCCCTCTCTCTCCCAAAACAACCTCTCAAACGCTCTGTCTCTGTTTCCACTTCCAAACTCAACGTCATTCTCACTCCCTCTTCATTCCCATGTCAACCATGTTCTCTTGCTTATTCTCCATCTTTCAAACTCGCTCCCTCACACTTTCACCCCTTCCATGCCAGAGCAACCTCCGTGCCGGAGAGCAGCGCCGGCAACACTCTGCTCAATACTCTGGAACTTGGAGCCCTGTTTGGGCTCTGGATCCTCTTCAACATCTACTTCAACATCTACAACAAACAGGTCTTAAAGGTCTACCATTTCCCTTTAACCGTAAGCACCCTTCAGTTCGCTGTGGGGTCTCTCTTCGTAGCATTCATGTGGAGTTTCAATCTCTATAAGAGACCTAAAGTTAGTGGCGCCCAGCTTGCAGCGATATTGCCACTGGCTCTAGTACATACTTTAGGGAACCTTTTCACCAACATGAGTCTCGGACAGGTTGCTGTGTCTTTCACTCACACTATAAAAGCGATGGAGCCTTTTTTTTCAGTGCTCCTTTCTGCTATGTTCCTTGGAGAGGCGCCTACTGCATGGGTTGTTGGTTCCCTTGTGCCTATTGTTGGTGGGGTGGCGTTAGCGTCTGCTACCGAGGCCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATTTGACTAATCAATCTCGTAATGTTCTTAGCAAAAAAGTCATGGTTAACAAGGAGGAATCTATGGACAACATAACCCTCTTCTCAATAATAACGGTTATGTCATTCTTGTTATCAGTACCTGTAACTTTGTTGATGGAGGGTGTCAAATTTACCCCTGCTTACCTGCAATCTGCTGGATTAAATGTTAACGAAGTGTACATCAGATCACTTCTTGCTGCACTATGTTTCCATGCATATCAGCAAGTTTCTTATATGATACTGCAGAAGGTGTCACCTGTTACCCACTCTGTAGGAAATTGTGTGAAAAGGGTTGTGGTCATCGTGAGCTCTGTCATCTTCTTCCAAACACCAGTATCACCAATTAACGCATTGGGGACTGCTATAGCTCTTGCTGGTGTTTTCTTGTATTCCAGGGTGAAGCGACTTAAGCCAAAGACAACTTAA
>Glyma17g09630.1 sequence type=predicted peptide gene model=Glyma17g09630 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MQSTVFSLSPSLSLPKQPLKRSVSVSTSKLNVILTPSSFPCQPCSLAYSPSFKLAPSHFHPFHARATSVPESSAGNTLLNTLELGALFGLWILFNIYFNIYNKQVLKVYHFPLTVSTLQFAVGSLFVAFMWSFNLYKRPKVSGAQLAAILPLALVHTLGNLFTNMSLGQVAVSFTHTIKAMEPFFSVLLSAMFLGEAPTAWVVGSLVPIVGGVALASATEASFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEESMDNITLFSIITVMSFLLSVPVTLLMEGVKFTPAYLQSAGLNVNEVYIRSLLAALCFHAYQQVSYMILQKVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINALGTAIALAGVFLYSRVKRLKPKTT*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||