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Report for Sequence Feature Glyma17g09630

Feature Type:gene_model
Chromosome:Gm17
Start:7132241
stop:7136801
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G33320AT Annotation by Michelle Graham. TAIR10: Glucose-6-phosphate/phosphate translocator-related | chr5:12588950-12591408 FORWARD LENGTH=408 SoyBaseE_val: 1.00E-171ISS
GO:0006810GO-bp Annotation by Michelle Graham. GO Biological Process: transport SoyBaseN/AISS
GO:0015713GO-bp Annotation by Michelle Graham. GO Biological Process: phosphoglycerate transport SoyBaseN/AISS
GO:0015714GO-bp Annotation by Michelle Graham. GO Biological Process: phosphoenolpyruvate transport SoyBaseN/AISS
GO:0005739GO-cc Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0009528GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plastid inner membrane SoyBaseN/AISS
GO:0009536GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plastid SoyBaseN/AISS
GO:0009941GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast envelope SoyBaseN/AISS
GO:0016020GO-cc Annotation by Michelle Graham. GO Cellular Compartment: membrane SoyBaseN/AISS
GO:0016021GO-cc Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane SoyBaseN/AISS
GO:0005215GO-mf Annotation by Michelle Graham. GO Molecular Function: transporter activity SoyBaseN/AISS
GO:0015120GO-mf Annotation by Michelle Graham. GO Molecular Function: phosphoglycerate transmembrane transporter activity SoyBaseN/AISS
GO:0015121GO-mf Annotation by Michelle Graham. GO Molecular Function: phosphoenolpyruvate:phosphate antiporter activity SoyBaseN/AISS
GO:0015297GO-mf Annotation by Michelle Graham. GO Molecular Function: antiporter activity SoyBaseN/AISS
KOG1441 KOG Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter JGI ISS
PTHR11132Panther SOLUTE CARRIER FAMILY 35 JGI ISS
PF00892PFAM EamA-like transporter family JGI ISS
PF03151PFAM Triose-phosphate Transporter family JGI ISS
UniRef100_B9RB11UniRef Annotation by Michelle Graham. Most informative UniRef hit: Triose phosphate/phosphate translocator, non-green plastid, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RB11_RICCO SoyBaseE_val: 0ISS
UniRef100_I1MTG4UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MTG4_SOYBN SoyBaseE_val: 0ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma17g09630 not represented in the dataset

Glyma17g09630 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.17g088500 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma17g09630.1   sequence type=CDS   gene model=Glyma17g09630   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCAGAGCACAGTTTTCTCTCTCTCCCCTTCCCTCTCTCTCCCAAAACAACCTCTCAAACGCTCTGTCTCTGTTTCCACTTCCAAACTCAACGTCATTCTCACTCCCTCTTCATTCCCATGTCAACCATGTTCTCTTGCTTATTCTCCATCTTTCAAACTCGCTCCCTCACACTTTCACCCCTTCCATGCCAGAGCAACCTCCGTGCCGGAGAGCAGCGCCGGCAACACTCTGCTCAATACTCTGGAACTTGGAGCCCTGTTTGGGCTCTGGATCCTCTTCAACATCTACTTCAACATCTACAACAAACAGGTCTTAAAGGTCTACCATTTCCCTTTAACCGTAAGCACCCTTCAGTTCGCTGTGGGGTCTCTCTTCGTAGCATTCATGTGGAGTTTCAATCTCTATAAGAGACCTAAAGTTAGTGGCGCCCAGCTTGCAGCGATATTGCCACTGGCTCTAGTACATACTTTAGGGAACCTTTTCACCAACATGAGTCTCGGACAGGTTGCTGTGTCTTTCACTCACACTATAAAAGCGATGGAGCCTTTTTTTTCAGTGCTCCTTTCTGCTATGTTCCTTGGAGAGGCGCCTACTGCATGGGTTGTTGGTTCCCTTGTGCCTATTGTTGGTGGGGTGGCGTTAGCGTCTGCTACCGAGGCCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATTTGACTAATCAATCTCGTAATGTTCTTAGCAAAAAAGTCATGGTTAACAAGGAGGAATCTATGGACAACATAACCCTCTTCTCAATAATAACGGTTATGTCATTCTTGTTATCAGTACCTGTAACTTTGTTGATGGAGGGTGTCAAATTTACCCCTGCTTACCTGCAATCTGCTGGATTAAATGTTAACGAAGTGTACATCAGATCACTTCTTGCTGCACTATGTTTCCATGCATATCAGCAAGTTTCTTATATGATACTGCAGAAGGTGTCACCTGTTACCCACTCTGTAGGAAATTGTGTGAAAAGGGTTGTGGTCATCGTGAGCTCTGTCATCTTCTTCCAAACACCAGTATCACCAATTAACGCATTGGGGACTGCTATAGCTCTTGCTGGTGTTTTCTTGTATTCCAGGGTGAAGCGACTTAAGCCAAAGACAACTTAA

>Glyma17g09630.1   sequence type=predicted peptide   gene model=Glyma17g09630   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MQSTVFSLSPSLSLPKQPLKRSVSVSTSKLNVILTPSSFPCQPCSLAYSPSFKLAPSHFHPFHARATSVPESSAGNTLLNTLELGALFGLWILFNIYFNIYNKQVLKVYHFPLTVSTLQFAVGSLFVAFMWSFNLYKRPKVSGAQLAAILPLALVHTLGNLFTNMSLGQVAVSFTHTIKAMEPFFSVLLSAMFLGEAPTAWVVGSLVPIVGGVALASATEASFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEESMDNITLFSIITVMSFLLSVPVTLLMEGVKFTPAYLQSAGLNVNEVYIRSLLAALCFHAYQQVSYMILQKVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINALGTAIALAGVFLYSRVKRLKPKTT*







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