Glyma17g08286 - SoyBase

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Report for Sequence Feature Glyma17g08286

Feature Type:	gene_model
Chromosome:	Gm17
Start:	6143518
stop:	6150705
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Expression Patterns of Glyma17g08286

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma17g08286 not represented in the dataset	Glyma17g08286 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma17g08286 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.17g075000	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma17g08286

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma17g08286

Limit To All Plant Sequences

>Glyma17g08286.2   sequence type=transcript   gene model=Glyma17g08286   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TCACGTGTTATGTCCGTGTACTACTTTGTTCTGTTTGCAGCTCCTGTCTCTTCCACAACAGGAACCTTACAAAGTCGGGAAAAAAAAGCACCCAATTTGCACCAAAGGAAAACACTTATCACCTTCGATCCATTTTTCTCATCTTATGAGAGCATTAAGTGTTGGTTGGAAGTCATCAAATCAAACCCAGATGCATATTACACTGTAGAGCTGCACATTGTAGAAAAGGAAATGAGGGATAGAGACAGAAAGCAAGGAAGCAAGTTAAACAACCCTAATCTTGTTGGGGTGAATGGTTTTGCTGCATATATATAGATGAAGATCACTAGGTGGAGGACATCACATTGCCAAAAATGGGAGGTTATGAGGTTTCAGAGTTGAGACATTTGGCTCTCATTCATCAGAATTCAGAAAAGAGATCGATGGTTAATTGTTTGCAGTTGATGATGAAGAAAGGCTCACAAGAAATTGATGCAACAAAACATTGAATATCAATCCAAGAGAGGTTTCACACCAGATTGAGAGAGGCTGACAGAAGAGAGTGAGCACATGCTAGTGGTATTTGTATGAGGGCATACAATTGCGGGTGCGTGCTCACTTCTCTATCTGTCAGCTTCCCATTCTTTTTTACTTTTGGTGTGTTCCTCTCATCTCTTCGTAACTTCACAACTCTTGAAGCGCCTCCTCAGTGTAACTCTCTTTTAACTTCATTCCATTCTCTGTGTTTTAAGTTTTCACACTCACTTTAAATAAGTCCCCTTTATGGTACAAACTTGTCTCATTCTCCGAGCAAGTCAATGGATCTATGTAATTATAGCCCTTGAAACGACTCGTATTGCATGATCCTTCTTTTGTGTTAAGCGTGCTTAATTGTTTGACAAATACTAATGGGAGGACTAAAAATATATATATATAGAGAGAGAGAGGTTGCTGGTTCTTCAGGTTGGTTGCGGTAAGCGTGCACAAACTTATCTATTTATTAATACTATATTAGTATAGTAGTAATTCATGTACTAGTATTTGCTTATCATTATCGATCTTTTGCTGTTTCAAGTGCCCTATAACCTGATCCTTATCTACTCGTGTTTTTTTCTACTATTTCTTTTCCATTTATTTCTGATACTGAAAGCGTGACTTTTTATAGTACTTTCCTTGATGGTGTTTTGAACACGAAATCCAAATGGAGGTCTTCGAGGCACGCCCTTCTTACGCTCTTTTCTCAATTCTCACTATTCATACTTTAACGGAAAATCTCCTTTTGGGATGAAGTTTCACTAAACCCTTGTTTTTTTCTCTTTGCCTTTCTCTCCTTCTTCTGCTCCTTGTCGACAGTGTAAGATCTTTTCTCGCCCTCATTTTTGGTCCACAAATTGTGCTCCACGCACTCATTAGGTTAAGAGAATCCAGCATAAAAGGGCAAGTCATGGGTTTTAAATTTATTTATTTTTAAAGTGTTGAATTTGAAGGGTCAGAATGAGATGTTTCATATATATCTTGGATCTGTCTCCTTGAATGCCATTATGTTTGTAGCCTTCATTTGAGGTAAAGGAAAATCTTGGGAGAGTTGATTAAGCAGCTAGATATGGCAAGATTTGGTCTTTCCCTTTGGGCAGCTATATAAGCGTTTGTTTGCTACCGTGATTAAAGGGAATTCAAGCAACAACCTTTCTTATACAGTGCTTAATTTGTAACATAGATTCCATCAGCACAGAACTTTGTCGATGTTACGAATAACTGCTCACTGAAGATCTTGAAGCACTACTATAATCACTCAGGTTAATTGCAAGGGAAACAAAATGGAACGCCAACTGTAGCATACATAGGATGGTGGTGTAGAGAGGTGAAACAAGTACCTGCCAATGTAATAGTGGTAGTGTTTAGGTACCTCTGATGATGCTGACGATACCACTGAGCAGGTTGTGATGCCTGTATGTACTGCCAGCGATTGATATGGAGATCTGGGAAGTAAAAAACAAAACTTAATGGAAGATTGATTACATGTTAAGCATCATACCTAGTGGTGGGGAAAATATGAATACAGAAGATGCATACTCAAACGCTTCTATTTCAACTGATCACATGCATTATGACAGTCAATACTTCGTGAAGTTCTCAGCTCTCGTACATCTAAAAAATGAGGACTGAGTTGCACAAATGTCACTATATAACAGTTTGCAGTTTTGGCTAGGATCCTTCAAGTCCTTACACAATGCCATTAAGCCCTATAATAGCACACTATCAAGTTTGGAGGCTTGCAATATTTTCAATGTCAATATAGTAAGAGGCTGTGCTCAAAATAAAGAATATGAAATCATGGTTCATACTTTGTAGCAACTCAAGTTTGTGAAGTCTCTGATGATGACTGATTGCTTAGTTATTATAAGTAATGATCTTAACTTGAATATATGATTGGATAAGGGAGATCTCAGCTAGAGATGTTGAAGTAAGATTGATGAACGAACTTGTCATCCCTCGTCCCTAGAAGACATGCCACAAGCTGGTGTGGTTGGAGACATACACATCGTTTTGATAACAGACTGACAGGATGATCAAGTCATGAAACTGCTATCAGAGTTGTAGTTTTGTATACATGGAACTGAAAGTGTTTGTGAAAAAAAAAAGACTGGTCGAACTAGTGATGTACTGATGTTATATTTGACCTTGTGAGACTATGGAGTAAAAATAGGGGTCAAAATCATTCTACATTCTTGATCTTATTGGGAGTTTACTCATTTGAAGATGTGCGTATCTCCTCCGGATGATACCTGAACCAGACCTAGATATTATAAAATATTTTTTATTTTTCAAAATGATCGCTTGGATGGTCTTTTCTTACAACAAAATATATAAATATTTCGTTAAGATTGGTTTAATCGGATCCTTTATTGTTCTTAAG

>Glyma17g08286.3   sequence type=transcript   gene model=Glyma17g08286   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TCACGTGTTATGTCCGTGTACTACTTTGTTCTGTTTGCAGCTCCTGTCTCTTCCACAACAGGAACCTTACAAAGTCGGGAAAAAAAAGCACCCAATTTGCACCAAAGGAAAACACTTATCACCTTCGATCCATTTTTCTCATCTTATGAGAGCATTAAGTGTTGGTTGGAAGTCATCAAATCAAACCCAGATGCATATTACACTGTAGAGCTGCACAAAAAGGAAATGAGGGATAGAGACAGAAAGCAAGGAAGCAAGTTAAACAACCCTAATCTTGTTGGGGTGAATGGTTTTGCTGCATATATATAGATGAAGATCACTAGGTGGAGGACATCACATTGCCAAAAATGGGAGGTTATGAGGTTTCAGAGTTGAGACATTTGGCTCTCATTCATCAGAATTCAGAAAAGAGATCGATGGTTAATTGTTTGCAGTTGATGATGAAGAAAGGCTCACAAGAAATTGATGCAACAAAACATTGAATATCAATCCAAGAGAGGTTTCACACCAGATTGAGAGAGGCTGACAGAAGAGAGTGAGCACATGCTAGTGGTATTTGTATGAGGGCATACAATTGCGGGTGCGTGCTCACTTCTCTATCTGTCAGCTTCCCATTCTTTTTTACTTTTGGTGTGTTCCTCTCATCTCTTCGTAACTTCACAACTCTTGAAGCGCCTCCTCAGTGTAACTCTCTTTTAACTTCATTCCATTCTCTGTGTTTTAAGTTTTCACACTCACTTTAAATAAGTCCCCTTTATGGTACAAACTTGTCTCATTCTCCGAGCAAGTCAATGGATCTATGTAATTATAGCCCTTGAAACGACTCGTATTGCATGATCCTTCTTTTGTGTTAAGCGTGCTTAATTGTTTGACAAATACTAATGGGAGGACTAAAAATATATATATATAGAGAGAGAGAGGTTGCTGGTTCTTCAGGTTGGTTGCGGTAAGCGTGCACAAACTTATCTATTTATTAATACTATATTAGTATAGTAGTAATTCATGTACTAGTATTTGCTTATCATTATCGATCTTTTGCTGTTTCAAGTGCCCTATAACCTGATCCTTATCTACTCGTGTTTTTTTCTACTATTTCTTTTCCATTTATTTCTGATACTGAAAGCGTGACTTTTTATAGTACTTTCCTTGATGGTGTTTTGAACACGAAATCCAAATGGAGGTCTTCGAGGCACGCCCTTCTTACGCTCTTTTCTCAATTCTCACTATTCATACTTTAACGGAAAATCTCCTTTTGGGATGAAGTTTCACTAAACCCTTGTTTTTTTCTCTTTGCCTTTCTCTCCTTCTTCTGCTCCTTGTCGACAGTGTAAGATCTTTTCTCGCCCTCATTTTTGGTCCACAAATTGTGCTCCACGCACTCATTAGGTTAAGAGAATCCAGCATAAAAGGGCAAGTCATGGGTTTTAAATTTATTTATTTTTAAAGTGTTGAATTTGAAGGGTCAGAATGAGATGTTTCATATATATCTTGGATCTGTCTCCTTGAATGCCATTATGTTTGTAGCCTTCATTTGAGGTAAAGGAAAATCTTGGGAGAGTTGATTAAGCAGCTAGATATGGCAAGATTTGGTCTTTCCCTTTGGGCAGCTATATAAGCGTTTGTTTGCTACCGTGATTAAAGGGAATTCAAGCAACAACCTTTCTTATACAGTGCTTAATTTGTAACATAGATTCCATCAGCACAGAACTTTGTCGATGTTACGAATAACTGCTCACTGAAGATCTTGAAGCACTACTATAATCACTCAGAAACTTAATGGAAGATTGATTACATGTTAAGCATCATACCTAGTGGTGGGGAAAATATGAATACAGAAGATGCATACTCAAACGCTTCTATTTCAACTGATCACATGCATTATGACAGTCAATACTTCGTGAAGTTCTCAGCTCTCGTACATCTAAAAAATGAGGACTGAGTTGCACAAATGTCACTATATAACAGTTTGCAGTTTTGGCTAGGATCCTTCAAGTCCTTACACAATGCCATTAAGCCCTATAATAGCACACTATCAAGTTTGGAGGCTTGCAATATTTTCAATGTCAATATAGTAAGAGGCTGTGCTCAAAATAAAGAATATGAAATCATGGTTCATACTTTGTAGCAACTCAAGTTTGTGAAGTCTCTGATGATGACTGATTGCTTAGTTATTATAAGTAATGATCTTAACTTGAATATATGATTGGATAAGGGAGATCTCAGCTAGAGATGTTGAAGTAAGATTGATGAACGAACTTGTCATCCCTCGTCCCTAGAAGACATGCCACAAGCTGGTGTGGTTGGAGACATACACATCGTTTTGATAACAGACTGACAGGATGATCAAGTCATGAAACTGCTATCAGAGTTGTAGTTTTGTATACATGGAACTGAAAGTGTTTGTGAAAAAAAAAAGACTGGTCGAACTAGTGATGTACTGATGTTATATTTGACCTTGTGAGACTATGGAGTAAAAATAGGGGTCAAAATCATTCTACATTCTTGATCTTATTGGGAGTTTACTCATTTGAAGATGTGCGTATCTCCTCCGGATGATACCTGAACCAGACCTAGATATTATAAAATATTTTTTATTTTTCAAAATGATCGCTTGGATGGTCTTTTCTTACAACAAAATATATAAATATTTCGTTAAGATTGGTTTAATCGGATCCTTTATTGTTCTTAAG

Coding sequences of Glyma17g08286

Limit To All Plant Sequences

>Glyma17g08286.1   sequence type=CDS   gene model=Glyma17g08286   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTCCGTGTACTACTTTGTTCTGTTTGCAGCTCCTGTCTCTTCCACAACAGGAACCTTACAAAGTCGGGAAAAAAAAGCACCCAATTTGCACCAAAGGAAAACACTTATCACCTTCGATCCATTTTTCTCATCTTATGAGAGCATTAAGTGTTGGTTGGAAGTCATCAAATCAAACCCAGATGCATATTACACTGTAGAGCTGCACATTGTAGAAAAGGAAATGAGGGATAGAGACAGAAAGCAAGGAAGCAAGTTAAACAACCCTAATCTTGTTGGGGTGAATGGTTTTGCTGCATATATATAG

>Glyma17g08286.2   sequence type=CDS   gene model=Glyma17g08286   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTCCGTGTACTACTTTGTTCTGTTTGCAGCTCCTGTCTCTTCCACAACAGGAACCTTACAAAGTCGGGAAAAAAAAGCACCCAATTTGCACCAAAGGAAAACACTTATCACCTTCGATCCATTTTTCTCATCTTATGAGAGCATTAAGTGTTGGTTGGAAGTCATCAAATCAAACCCAGATGCATATTACACTGTAGAGCTGCACATTGTAGAAAAGGAAATGAGGGATAGAGACAGAAAGCAAGGAAGCAAGTTAAACAACCCTAATCTTGTTGGGGTGAATGGTTTTGCTGCATATATATAG

>Glyma17g08286.3   sequence type=CDS   gene model=Glyma17g08286   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTCCGTGTACTACTTTGTTCTGTTTGCAGCTCCTGTCTCTTCCACAACAGGAACCTTACAAAGTCGGGAAAAAAAAGCACCCAATTTGCACCAAAGGAAAACACTTATCACCTTCGATCCATTTTTCTCATCTTATGAGAGCATTAAGTGTTGGTTGGAAGTCATCAAATCAAACCCAGATGCATATTACACTGTAGAGCTGCACAAAAAGGAAATGAGGGATAGAGACAGAAAGCAAGGAAGCAAGTTAAACAACCCTAATCTTGTTGGGGTGAATGGTTTTGCTGCATATATATAG

Predicted protein sequences of Glyma17g08286

Limit To All Plant Sequences

>Glyma17g08286.1   sequence type=predicted peptide   gene model=Glyma17g08286   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSVYYFVLFAAPVSSTTGTLQSREKKAPNLHQRKTLITFDPFFSSYESIKCWLEVIKSNPDAYYTVELHIVEKEMRDRDRKQGSKLNNPNLVGVNGFAAYI*

>Glyma17g08286.2   sequence type=predicted peptide   gene model=Glyma17g08286   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSVYYFVLFAAPVSSTTGTLQSREKKAPNLHQRKTLITFDPFFSSYESIKCWLEVIKSNPDAYYTVELHIVEKEMRDRDRKQGSKLNNPNLVGVNGFAAYI*

>Glyma17g08286.3   sequence type=predicted peptide   gene model=Glyma17g08286   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSVYYFVLFAAPVSSTTGTLQSREKKAPNLHQRKTLITFDPFFSSYESIKCWLEVIKSNPDAYYTVELHKKEMRDRDRKQGSKLNNPNLVGVNGFAAYI*

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