Report for Sequence Feature Glyma17g08150
Feature Type: gene_model
Chromosome: Gm17
Start: 6026393
stop: 6031346
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma17g08150
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G30920 AT
Annotation by Michelle Graham. TAIR10: Cytosol aminopeptidase family protein | chr4:15046589-15049304 REVERSE LENGTH=583
SoyBase E_val: 0 ISS
GO:0006508 GO-bp
Annotation by Michelle Graham. GO Biological Process: proteolysis
SoyBase N/A ISS
GO:0010150 GO-bp
Annotation by Michelle Graham. GO Biological Process: leaf senescence
SoyBase N/A ISS
GO:0019538 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein metabolic process
SoyBase N/A ISS
GO:0005622 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: intracellular
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0005773 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: vacuole
SoyBase N/A ISS
GO:0005829 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytosol
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0009570 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast stroma
SoyBase N/A ISS
GO:0004177 GO-mf
Annotation by Michelle Graham. GO Molecular Function: aminopeptidase activity
SoyBase N/A ISS
GO:0008235 GO-mf
Annotation by Michelle Graham. GO Molecular Function: metalloexopeptidase activity
SoyBase N/A ISS
GO:0030145 GO-mf
Annotation by Michelle Graham. GO Molecular Function: manganese ion binding
SoyBase N/A ISS
KOG2597
KOG
Predicted aminopeptidase of the M17 family
JGI ISS
PTHR11963 Panther
PROTEASE M17 LEUCINE AMINOPEPTIDASE-RELATED
JGI ISS
PF00883 PFAM
Cytosol aminopeptidase family, catalytic domain
JGI ISS
PF02789 PFAM
Cytosol aminopeptidase family, N-terminal domain
JGI ISS
UniRef100_G7JGP9 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Leucine aminopeptidase n=1 Tax=Medicago truncatula RepID=G7JGP9_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1MT23 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MT23_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma17g08150
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma17g08150
Paralog Evidence Comments
Glyma02g36530 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma17g08150 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.17g073800 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma17g08150
Coding sequences of Glyma17g08150
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma17g08150.1 sequence type=CDS gene model=Glyma17g08150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCAGCCATTGCTACTATCTTCGTTTCTTTCACAACCACTTCGTCTTCTCCGTTTCTCACTAGACTCACATCGCGCCTCCATTTCGCTGCATTCCCTCTGCGTTCTCCAACGAGGAAACTCATGTCGCACACTCTCGCACGTGCCACTCTCGGTCTCACACATCCTTCTAACATCGAAACACCCAAGATCTCTTTTGGTTCTAAGGATGTTGATGTGACGGAATGGAAAGGGGACATTCTGGCAGTGGGTGTTACGGAGAAAGATTTGGCTAGAGATGCAAACTCGAAGTTTGAGAATGTGATTTTGAGAAAGATCGACTCAAAGTTGGGTGGTTTATTAGCTGAAGCCTCTTCTGAAGAGGATTTCTCTGGCAAAGTTGGTCAGTCAACTGTTCTTAGAATTACAGGACTTGGATCAAAGAGGGTTGGATTGATTGGTCTTGGTCAGTCACCTTCCACTCCTTCACCTTTTAAGGGTCTTGGCGAGGCCGTTGTGGAGGCTGCCAAGTCTTCTCAAGCAAGCAGTGTTGCTGTCGTTCTTGCCTCTTCTGAAGGACTCTCTGCTCAATCAAAGCTTAGCACTGCTTATGCAATTGCTTCTGGGGCTGTGCTGGGATTATTTGAAGATAATAGATACAAGTCAGAAGCAAAGAAATCAACACTTAGGTCCATTGATATTATTGGTCTTGGGATGGGACCTGAACTGGAGAAGAAACTGAAGTACGCAGGAGATGTTTCTTCCGGAATTATCTTTGGAAGGGAGCTTGTAAATTCTCCTGCTAATGTGCTCACACCAGGGGTGTTGGCAGAAGAGGCAGCTAAGATTGCTTCTACCTACAGTGATGTTTTCACTGCTAAAATATTAAATGCCGAGCAATGTGCTGAATTAAAAATGGGATCCTATCTGGGTGTTGCTGCAGCCTCGGAAAATCCTCCTCATTTTATCCATCTATGTTACAAACCTCTGAGTGGACCTGTCAATGTCAAGTTGGCTTTAGTTGGCAAAGGTTTGACTTTTGACAGTGGTGGCTACAACATCAAGACTGGACCTGGCTGTTCAATTGAACTCATGAAATTTGATATGGGTGGTTCAGCAGCAGTTTTAGGAACAGCGAAAGCTCTTGGTCAAATCAAACCTCTAGGGGTGGAGGTTCATTTTATTGTTGCAGCTTGTGAGAATATGATAAGTGGAACAGGTATGAGGCCTGGAGATATTGTCACAGCTTCAAATGGAAAGACTATAGAGGTTAACAACACTGATGCTGAAGGTAGACTTACCCTGGCAGATGCTCTGGTATATGCTTGTAATCAAGGTGTTGAAAAGATTATTGACTTGGCAACCTTGACCGGGGCCTGCGTTGTTGCCCTTGGACCCTCAATTGCTGGTGTGTTTACACCCAGTGATGACCTAGCAAAGGAAGTTTTTGAAGCTTCTGATGTGAGTGGGGAGAAACTATGGAGGTTGCCATTGGAGGAAAGTTACTGGGAAACAATGAAATCAGGAGTTGCTGACATGTTGAACACTGGTGGTCGACAAGGTGGTGCTATTGTGGCTGCTCTCTTCTTAAAACAGTTTGTTGATGAAAAGGTTCAATGGATGCACATTGACATGGCTGGTCCTGTGTGGAATGACAAGAAGCGTTCAGCAACAGGATTTGGCATTGCTACTTTAGTGGAATGGGTTTTGAAAAACGCTTCAAAGGCCAACTGA
Predicted protein sequences of Glyma17g08150
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma17g08150.1 sequence type=predicted peptide gene model=Glyma17g08150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAAIATIFVSFTTTSSSPFLTRLTSRLHFAAFPLRSPTRKLMSHTLARATLGLTHPSNIETPKISFGSKDVDVTEWKGDILAVGVTEKDLARDANSKFENVILRKIDSKLGGLLAEASSEEDFSGKVGQSTVLRITGLGSKRVGLIGLGQSPSTPSPFKGLGEAVVEAAKSSQASSVAVVLASSEGLSAQSKLSTAYAIASGAVLGLFEDNRYKSEAKKSTLRSIDIIGLGMGPELEKKLKYAGDVSSGIIFGRELVNSPANVLTPGVLAEEAAKIASTYSDVFTAKILNAEQCAELKMGSYLGVAAASENPPHFIHLCYKPLSGPVNVKLALVGKGLTFDSGGYNIKTGPGCSIELMKFDMGGSAAVLGTAKALGQIKPLGVEVHFIVAACENMISGTGMRPGDIVTASNGKTIEVNNTDAEGRLTLADALVYACNQGVEKIIDLATLTGACVVALGPSIAGVFTPSDDLAKEVFEASDVSGEKLWRLPLEESYWETMKSGVADMLNTGGRQGGAIVAALFLKQFVDEKVQWMHIDMAGPVWNDKKRSATGFGIATLVEWVLKNASKAN*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
