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Report for Sequence Feature Glyma17g06361

Feature Type:gene_model
Chromosome:Gm17
Start:4520390
stop:4524170
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma17g06361
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G56140AT Annotation by Michelle Graham. TAIR10: Leucine-rich repeat transmembrane protein kinase | chr1:21001708-21007725 REVERSE LENGTH=1033 SoyBaseE_val: 4.00E-104ISS
GO:0006468GO-bp Annotation by Michelle Graham. GO Biological Process: protein phosphorylation SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0004672GO-mf Annotation by Michelle Graham. GO Molecular Function: protein kinase activity SoyBaseN/AISS
GO:0004674GO-mf Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity SoyBaseN/AISS
GO:0004713GO-mf Annotation by Michelle Graham. GO Molecular Function: protein tyrosine kinase activity SoyBaseN/AISS
GO:0005524GO-mf Annotation by Michelle Graham. GO Molecular Function: ATP binding SoyBaseN/AISS
GO:0016772GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups SoyBaseN/AISS
KOG1187 KOG Serine/threonine protein kinase JGI ISS
PTHR24420Panther FAMILY NOT NAMED JGI ISS
PF07714PFAM Protein tyrosine kinase JGI ISS
UniRef100_G7JT83UniRef Annotation by Michelle Graham. Most informative UniRef hit: Cysteine-rich receptor-like protein kinase n=1 Tax=Medicago truncatula RepID=G7JT83_MEDTR SoyBaseE_val: 0ISS
UniRef100_UPI000233E0DDUniRef Annotation by Michelle Graham. Best UniRef hit: UPI000233E0DD related cluster n=1 Tax=unknown RepID=UPI000233E0DD SoyBaseE_val: 0ISS

Expression Patterns of Glyma17g06361
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma17g06361 not represented in the dataset
Glyma17g06361 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma17g06361 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.17g055900 Wm82.a2.v1IGC As supplied by JGI

References for Glyma17g06361
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Transcripts of Glyma17g06361
>Glyma17g06361.2   sequence type=transcript   gene model=Glyma17g06361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CATCAATTCTACGGGACACCTCTAGAATAGAATGTTTCTCCAACTTTCTTTTTTGTTTTCCAACATAAAAATTGGCAACAATAACAACAACCAAGAATTAGTAAATACAAAACCAGATAGAAAAAACCATCGGAGAATGGTTGCTGTTGCCAGTTGTTGAACTTAACCCTTTCATATTTGCCCATGACAATATTGACCAACACCGTTCAACCAGAATGCATGCTTCTGTCCCCAAGATGCCTCGAAGAATACTCCCAGAGAAACCTCCTATTCCTTCACACCATGACCCTGGAGTGTTTTTCTTCCTTGGAGGGATTGTAGTGCTCGTCATATTGCTGATTCTTGTGTTTATATTTTGGAGGCGTATTAAACGGCCAGCAAAGGTGATGGAGAACACAGTTCTAACAAGTCAGCAGCATGGACCAATGGAGTTCATTAGTGGGAACCTTCGGACAATTAGCTACTTTGACTTCCGGACATTGAGGAGAGCCACTAAGAATTTCCATCCTCGAAATCTTCTTGGAAGTGGTGGATTTGGGCCTGTCTATCAGGGAAAGTTGGCAGATGGAAGGCTTATTGCCGTCAAGACATTGTCTCTTGACAAGTCTCAACAAGGTGAAAAAGAATTTCTGGCAGAAGTGAGAATGATCACAAGCATTCAACACAAAAATCTGGTTCGCCTTATTGGATGTTGCACAGATGGCCCTCAAAGGATACTTGTGTACGAATACATGAAGAACAGAAGTTTAGACCTCATAATATATGGAAAGAGTGATCAATTTCTGAATTGGAGCACTAGATTCCAAATTATTCTTGGTGTAGCACGGGGATTACAATACCTCCACGAGGATTCACATTTAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGAGAAGTTTCAGCCTAGGATTGGAGACTTTGGGCTAGCTAGGTTCTTCCCTGAAGACCAAGCTTACCTTAGCACTCAGTTCGCAGGAACATTAGGTTATACAGCTCCTGAGTATGCCATTAGAGGAGAATTGTCTGAAAAGGCAGACATATATAGTTTTGGAGTTCTTGTGCTTGAAATCATCAGTTGTAGGAAAAACACAGATCTTACTTTAGCATCAGAAAAACAGTACCTCCCTGAATATGCATGGAAACTTTATGAGAAGTCAATGTTGATGGAAATTGTAGATCCAAAGCTGCAAGAGCAAGGCATAGAAGAAAAGGATGTCATGCAAGCATTCCACGTGGCCTTGTTATGCCTTCAGCCACACGCGGATTTGAGGCCTGCCATGTCAGAGATCGTAGCAATGTTGACATTCAAAGTTGAAATGGTTACAGCACCAATGAGGCCAATCTTCGTTGATCGAAGGCGCGTAATGGATGATGAACATCACTCATGGGAAACCATATACGAGGCTTTCACCACTGCAGTGGCATCCCGGCCCACGTAAAACACCAATACTCTAGAACGTAACACATGCATGCACCTGGTCCTGTCAAATAAGGAACAATTTCCTTTAAAGAAGGAAAGAGATATAAGGTCAAAGGTTCGGACAAAGTATGGATTTCACTTGGTTTAGGTGTTGTATATATATATATATATATATATATTTGGAAATGAATCATCTCCATCATCTTCATTGCAAATTTTGTACCTATCTCTTCCTCGCATATATTTACTAATAATATATATCGGCAAAAATTCAACACTAGTTGCAAAAGGAATCTACATATCCTGTAGGGACTAGGGAGTTCTGTGAAGTTTTTGCAGTAAGGCTTGGGATAGGTGTTTGCTGCCCAAAATAGCCTCAAGAAATTACATGTGAGC
Coding sequences of Glyma17g06361
>Glyma17g06361.1   sequence type=CDS   gene model=Glyma17g06361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCATGCTTCTGTCCCCAAGATGCCTCGAAGAATACTCCCAGAGAAACCTCCTATTCCTTCACACCATGACCCTGGAGTGTTTTTCTTCCTTGGAGGGATTGTAGTGCTCGTCATATTGCTGATTCTTGTGTTTATATTTTGGAGGCGTATTAAACGGCCAGCAAAGGTGATGGAGAACACAGTTCTAACAAGTCAGCAGCATGGGAAATATATTGAACCGTCAGAGGTGATGAAGATGATAGTACCAAATATAAAACAGCCAGGACCAATGGAGTTCATTAGTGGGAACCTTCGGACAATTAGCTACTTTGACTTCCGGACATTGAGGAGAGCCACTAAGAATTTCCATCCTCGAAATCTTCTTGGAAGTGGTGGATTTGGGCCTGTCTATCAGGGAAAGTTGGCAGATGGAAGGCTTATTGCCGTCAAGACATTGTCTCTTGACAAGTCTCAACAAGGTGAAAAAGAATTTCTGGCAGAAGTGAGAATGATCACAAGCATTCAACACAAAAATCTGGTTCGCCTTATTGGATGTTGCACAGATGGCCCTCAAAGGATACTTGTGTACGAATACATGAAGAACAGAAGTTTAGACCTCATAATATATGGAAAGAGTGATCAATTTCTGAATTGGAGCACTAGATTCCAAATTATTCTTGGTGTAGCACGGGGATTACAATACCTCCACGAGGATTCACATTTAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGAGAAGTTTCAGCCTAGGATTGGAGACTTTGGGCTAGCTAGGTTCTTCCCTGAAGACCAAGCTTACCTTAGCACTCAGTTCGCAGGAACATTAGGTTATACAGCTCCTGAGTATGCCATTAGAGGAGAATTGTCTGAAAAGGCAGACATATATAGTTTTGGAGTTCTTGTGCTTGAAATCATCAGTTGTAGGAAAAACACAGATCTTACTTTAGCATCAGAAAAACAGTACCTCCCTGAATATGCATGGAAACTTTATGAGAAGTCAATGTTGATGGAAATTGTAGATCCAAAGCTGCAAGAGCAAGGCATAGAAGAAAAGGATGTCATGCAAGCATTCCACGTGGCCTTGTTATGCCTTCAGCCACACGCGGATTTGAGGCCTGCCATGTCAGAGATCGTAGCAATGTTGACATTCAAAGTTGAAATGGTTACAGCACCAATGAGGCCAATCTTCGTTGATCGAAGGCGCGTAATGGATGATGAACATCACTCATGGGAAACCATATACGAGGCTTTCACCACTGCAGTGGCATCCCGGCCCACGTAA

>Glyma17g06361.2   sequence type=CDS   gene model=Glyma17g06361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCATGCTTCTGTCCCCAAGATGCCTCGAAGAATACTCCCAGAGAAACCTCCTATTCCTTCACACCATGACCCTGGAGTGTTTTTCTTCCTTGGAGGGATTGTAGTGCTCGTCATATTGCTGATTCTTGTGTTTATATTTTGGAGGCGTATTAAACGGCCAGCAAAGGTGATGGAGAACACAGTTCTAACAAGTCAGCAGCATGGACCAATGGAGTTCATTAGTGGGAACCTTCGGACAATTAGCTACTTTGACTTCCGGACATTGAGGAGAGCCACTAAGAATTTCCATCCTCGAAATCTTCTTGGAAGTGGTGGATTTGGGCCTGTCTATCAGGGAAAGTTGGCAGATGGAAGGCTTATTGCCGTCAAGACATTGTCTCTTGACAAGTCTCAACAAGGTGAAAAAGAATTTCTGGCAGAAGTGAGAATGATCACAAGCATTCAACACAAAAATCTGGTTCGCCTTATTGGATGTTGCACAGATGGCCCTCAAAGGATACTTGTGTACGAATACATGAAGAACAGAAGTTTAGACCTCATAATATATGGAAAGAGTGATCAATTTCTGAATTGGAGCACTAGATTCCAAATTATTCTTGGTGTAGCACGGGGATTACAATACCTCCACGAGGATTCACATTTAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGAGAAGTTTCAGCCTAGGATTGGAGACTTTGGGCTAGCTAGGTTCTTCCCTGAAGACCAAGCTTACCTTAGCACTCAGTTCGCAGGAACATTAGGTTATACAGCTCCTGAGTATGCCATTAGAGGAGAATTGTCTGAAAAGGCAGACATATATAGTTTTGGAGTTCTTGTGCTTGAAATCATCAGTTGTAGGAAAAACACAGATCTTACTTTAGCATCAGAAAAACAGTACCTCCCTGAATATGCATGGAAACTTTATGAGAAGTCAATGTTGATGGAAATTGTAGATCCAAAGCTGCAAGAGCAAGGCATAGAAGAAAAGGATGTCATGCAAGCATTCCACGTGGCCTTGTTATGCCTTCAGCCACACGCGGATTTGAGGCCTGCCATGTCAGAGATCGTAGCAATGTTGACATTCAAAGTTGAAATGGTTACAGCACCAATGAGGCCAATCTTCGTTGATCGAAGGCGCGTAATGGATGATGAACATCACTCATGGGAAACCATATACGAGGCTTTCACCACTGCAGTGGCATCCCGGCCCACGTAA
Predicted protein sequences of Glyma17g06361
>Glyma17g06361.1   sequence type=predicted peptide   gene model=Glyma17g06361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MHASVPKMPRRILPEKPPIPSHHDPGVFFFLGGIVVLVILLILVFIFWRRIKRPAKVMENTVLTSQQHGKYIEPSEVMKMIVPNIKQPGPMEFISGNLRTISYFDFRTLRRATKNFHPRNLLGSGGFGPVYQGKLADGRLIAVKTLSLDKSQQGEKEFLAEVRMITSIQHKNLVRLIGCCTDGPQRILVYEYMKNRSLDLIIYGKSDQFLNWSTRFQIILGVARGLQYLHEDSHLRIVHRDIKASNILLDEKFQPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLASEKQYLPEYAWKLYEKSMLMEIVDPKLQEQGIEEKDVMQAFHVALLCLQPHADLRPAMSEIVAMLTFKVEMVTAPMRPIFVDRRRVMDDEHHSWETIYEAFTTAVASRPT*

>Glyma17g06361.2   sequence type=predicted peptide   gene model=Glyma17g06361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MHASVPKMPRRILPEKPPIPSHHDPGVFFFLGGIVVLVILLILVFIFWRRIKRPAKVMENTVLTSQQHGPMEFISGNLRTISYFDFRTLRRATKNFHPRNLLGSGGFGPVYQGKLADGRLIAVKTLSLDKSQQGEKEFLAEVRMITSIQHKNLVRLIGCCTDGPQRILVYEYMKNRSLDLIIYGKSDQFLNWSTRFQIILGVARGLQYLHEDSHLRIVHRDIKASNILLDEKFQPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLASEKQYLPEYAWKLYEKSMLMEIVDPKLQEQGIEEKDVMQAFHVALLCLQPHADLRPAMSEIVAMLTFKVEMVTAPMRPIFVDRRRVMDDEHHSWETIYEAFTTAVASRPT*






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