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Report for Sequence Feature Glyma17g04440

Feature Type:gene_model
Chromosome:Gm17
Start:2977225
stop:2977786
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Expression Patterns of Glyma17g04440
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma17g04440
ParalogEvidenceComments
Glyma07g36240 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma17g04440 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.17g040100 Wm82.a2.v1IGC As supplied by JGI

References for Glyma17g04440
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma17g04440
>Glyma17g04440.1   sequence type=CDS   gene model=Glyma17g04440   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGTCTGTGTTTCCAATCTCAAAAATGGACCTTTTTCAGAGCAGCACCATTCCCCCTCCTCCTCCTCACACAAACTTCACAAAAAGAAAAGGAGAAGGTAAAGGCAAGGCTTTCACCGACCCTTGTGTGTAGTTGTGCAGTTGTTTGA
Predicted protein sequences of Glyma17g04440
>Glyma17g04440.1   sequence type=predicted peptide   gene model=Glyma17g04440   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGLCFQSQKWTFFRAAPFPLLLLTQTSQKEKEKVKARLSPTLVCSCAVV*






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