SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT3G17360 | AT | Annotation by Michelle Graham. TAIR10: phragmoplast orienting kinesin 1 | chr3:5936108-5946205 FORWARD LENGTH=2066 | SoyBase | E_val: 0 | ISS |
| GO:0000280 | GO-bp | Annotation by Michelle Graham. GO Biological Process: nuclear division | SoyBase | N/A | ISS |
| GO:0000910 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cytokinesis | SoyBase | N/A | ISS |
| GO:0000911 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cytokinesis by cell plate formation | SoyBase | N/A | ISS |
| GO:0006275 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of DNA replication | SoyBase | N/A | ISS |
| GO:0007000 | GO-bp | Annotation by Michelle Graham. GO Biological Process: nucleolus organization | SoyBase | N/A | ISS |
| GO:0007018 | GO-bp | Annotation by Michelle Graham. GO Biological Process: microtubule-based movement | SoyBase | N/A | ISS |
| GO:0010389 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of G2/M transition of mitotic cell cycle | SoyBase | N/A | ISS |
| GO:0003777 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: microtubule motor activity | SoyBase | N/A | ISS |
| GO:0005524 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATP binding | SoyBase | N/A | ISS |
| KOG4280 | KOG | Kinesin-like protein | JGI | ISS | |
| PTHR24115 | Panther | FAMILY NOT NAMED | JGI | ISS | |
| PTHR24115:SF82 | Panther | SUBFAMILY NOT NAMED | JGI | ISS | |
| PF00225 | PFAM | Kinesin motor domain | JGI | ISS | |
| UniRef100_G7JQ21 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Kinesin-like protein KIF15 n=1 Tax=Medicago truncatula RepID=G7JQ21_MEDTR | SoyBase | E_val: 0 | ISS |
| UniRef100_UPI000233F39B | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233F39B related cluster n=1 Tax=unknown RepID=UPI000233F39B | SoyBase | E_val: 0 | ISS |
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Glyma17g04300 not represented in the dataset |
Glyma17g04300 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.17g038700 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma17g04300.2 sequence type=CDS gene model=Glyma17g04300 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTCGAAGGAAACTCGAACCTCCGCTCGAAGAAACCCTCAAACCGAATCAAACGAGAACGAATTCGAACCATGCCCCCCGAACCAAATCAACTTCCCACCTCCCCGAACCCCCTTCAGCTCCATACCTGACCCCTCTCGGTTCGGAAACGCCACTCCCAGGCTCTCCGTTAGGTTCGGGAAGCCGCATTCCGAACCTAACTCGGCGCAGAGCACGCCTTCTAGAAACACTTCCAGGCTTTCACTCGGCGGAGGAAGGTTAAGTTCGTGTGCGTTCGTTAAAGAGACCGAATTCTGCGTCCACGTTCCGCATTTCGACCTCAAAGACGACCCGTCGTTCTGGACGGATCATAATGTGCAGGTGCTGATTAGAATTCGACCGTTGAGTAATTCGGAGAAGGTTTCGCAAGGGCATGGTAGGTGTTTGAAGCAGGAGAGTGCGCAAACTTTGGTCTGGCTCGGTCATCCTGAAACCAGATTCACCTTTGATCATATAGGATGTGAGACCTTATCACAGGAAAACCTGTTCAGAGTTGCTGGAGTGCCCATGGTGGAGAATTGTTTGTCTGGTTACAACAGTTGTATGTTTGCTTATGGTCAGACGGGTAGTGGCAAAACATATACCATGATGGGTGAAATTAAGGAAACAGAAGGATACCTTACTGAAGATAGTGGGATAACACCAAGAGTTTTTGACTATTTGTTTACGAGGATTAAAGCGGAAGAAGAGAGAAGGAAGTATTACAAGCTGAAATACAGTTGCAAGTGTTCCTTTTTGGAGATATACAATGAGCAAATAACTGATCTTCTTGAACCTTCATCAACTAATCTGCAACTCAGAGAAGATTTGAAGAAGGGGGTATATGTTGAAAACCTTACCGAACATAGTGTGGACACAGTTTATGATGTTCTCAGGCTTTTGTTACAGGGCACTGCAAATAGAAAGGTGGCTGCTACTCACATGAACTGTGAAAGCAGTCGGTCTCACAGTGTTTTCACTTGTATTATTGAAAGCCAATGGGAGAAAGATTCTATGACCCACTTTAGGTTTGCTAGGTTAAATTTAGTAGATTTGGCTGGTTCTGAAAGGCAGAAAAGCTCTGGAGCAGATAGTGAACGTTTGAAAGAAGCAGCAAATATAAATAAATCGTTGTCAACACTTGGCTTGGTCATAATGACTTTGGTGGACTTAGCCCATGGGAAGCCTAGGCATGTTCCGTACAGAGATTCAAGACTTACATTTCTTCTTCAGGATTCTTTAGGTGGTAATTCAAAGACAATGATCATTGCAAATGTCAGCCCATCCATTTGCTGTGCTAACGAAACACTAAGCACACTGAAGTTTGCCCAGCGAGCCAAGCTCATTCAAAACAATGCAAAAGTGAATGAAGATGCTTCCGGTGATGTAAGTGCACTGCAGTGGCAGATTCAACAGTTGAAGGGTCAACTGTCCTTTCTGATGAACAATAAAAAATTTCCAAGCTCTGTTCCAAATTTAGAGCCAAATCCTGAAAGCTGTAGGTTGAGTGAAGTGTCAGAAGAATATGAATCTTTGGGAGAAAGAGTAACAACAGATCACCAACTACTTATTCCAAGCAAAGAGGTTCGACAAAAGGAAGAGGAAATTCAACATACTTCAAGTATGCTGAGGCATTATAAGGAGAAAATTAAACAACTTGAGTTATTGGTAGATGGGAAACTGTCAGCTGAGAAGTATCTAATGGAGGAAAACAGGGCTTTACAGGAGGAGATTCAGTTGCTTAAAGTGAATATTGATAAAAATTCAGAATCATCCAGACTTGCTTTGGAGAATGATAGACTTTTGCAACAACTTCAACTATTTCAAAACTTCTATGAGCATGGAGAGCGGGAAAGATTGCTGACTGAACTATCTGAATTGCGTGATCAGCTCCTTGTCCATCTCCAAGAAAAATTTACATACTCCATGAAAAATGAAAATCAGGATACTGATACTGCACAAGAGTTAGAAGAGTGCCAGAATATGAATTCTAAATTACTTAGAGAAGTTGGTATATTACAAGCAAATCTTGGAAAATATTTGAACTACAATCAAATTCTGAATTCTTCTTTTGAGCATCCTGGTGAAATTCTAAAGACTGATAAATGTTCATTGGTTGAGACAATATCAATGAGAAGTGATTCTGGAGATGAAATTCCGTCCTCTACATGGGAAGCTGATGATGCTTTAGCAAATATAATTGAAGGAAATGCTTTGCGATCCTCAATAATGCTTGCTAAAGATAATGAATATAACAACGAAGAGTTAGAGGCCAAATTGGAAAAAATGAGCAAGGATCTTGAAGAAGCGAGGTTAGTTAATGACCAATATCAAGAGAAATGGGCATTACAATTATATCAAAAACGACAGACTGAAACAATCTGTCAAGAGGTTGAGATGGAGACAACCAATACAATTCTTCATTTACAGGAAGAGGTTGCCCATCTTCAGTCAGAGTTTGAAGAGAGGTTATGCACCATTGCTCAAGAAAATACAGAGCTAAGAAATATGGTTGCAGAAAAAGAAGAGGAAATTAGGTCACGGTGTTTGGACTGGGAAAAGGCAATCTTGGAACTGACAACTTTCCTCCTAGAAGGCTCCAGATCTCTCAAAGATGCCTGTGGTCAGGTGAAAAACATTTCTTGTTCATTTCCTCAGGCCAATGCTTGGATTAGCGAACATGTTGACATGGCGGTCAAAAAGTATATTGAGAAGGAGGAAACAATTCAGCAGCTACAAAGTAGCTTGAAGGATGCACAGAAGATGGTATCGGACATGGAGCTGAAAATAAGTTCCTTAAAGGAAGCAACAGTAGCCTTCAATGCACTTCAACAGTTAGACAACAATGAAGGCAATGAGGAGGTGATTGAGTTGCAAGTGTTGTTAAATGAGAAGACCAATATGATAAGGATGCTGGAAAATGAAATAAATCATAAAAACAATCAACTTTGTAAGGTAACCAAACAAGCTGATGCTGCATTCCTTGTAGCAAAGTGGCTCTCTGATTGTTATAATGTAGCTCACATGAATGATGATATTCAAGATATTTCCATTCCTGAACTTGATGTGCAAGCCAGACTTGGAAATTGTACTATTTCTGAGAATCAAGATGTTCAAAATAATTTGATACTGAATGATCTTATGGCTCAAGTTGAGTTAACAAAACTAGAGGTACTGGAGATGGAGAATGCTGTAAAAGCCTCTTTTGTTGATACAGAAACACAGATAGAAGCTTTCCAAACTGGTGTTTCAGGCCTTTATTCTGCTTACAGGAACTTGATTCAGGACATTGTCAAGGAAACTCAGGATACAAAGAAAGAAATAAGGGATTTAAAGATTTATCATAGAAGTTCCAAGGGTTATAGAGTAGACTCCTTAACATCAAATGCAAACAAATGTAAGGAGTATGCAAACCAGCATCACACACTACATCAGATAAAAGAGCAACTTGTTGAAGTGAATAGAAGATTGAATGTCATAGACAATTTTATCAGAGCAGAAAATATGTCTAGCTTTCAACTACTGGATGAAGATCTCATAGATGCTGATGATTTGAGCGCTGATAGTTCTTCAGTCTCTGATTTATCAACTGAAACTGACAGCTTTGCTTCTGGAAGCAAGTCACATGAATCCACATATACTTGCAACTTTAAGTTCCCTGGAAAAACAACTGAACAAATTGTACACCTAAAATCCGAAAGATGTTCTGTAATTCAATCTCATGGTAGTTGCAAATCATCAAATACAGGAAAGCTTGTGGAAAGGCGAATTCATAATGAAGCAGTAGTGTGCTGTCTGAGTAAAGAATTAAATGTCACATATGATAGTTTTCAAAGATTGTATCTTCGTTTGTCTGCACTCCTCCAAGAATTGGATGATGGATCCTGTTTTTACCCAAAAGAACTGAAAAAGGTGGCTCCATATTTCCAGTTGGAGATGCAGAAAGACAAAGCAGGTTGTGAGAATGACAAAGAGATATTGGGTTATATGGAAATTAAGCCTGATGATGGCTTCTTGACCAAATTTATGGAAGCTCATGCAACAGTGCAGGAAGCTGATCTTACACTGCATGCCTTGACGGAAGCTTATGAAGATTCAAAACAGTTGACTGCTATGTGGAAGCAAGCTGGTGAAGACTTGATGATTGAGAGAGCGAGCTTGGTAGAAGAGATTCAAAAACTCAAATTTTCAATTTTTCATAAAGAAGAAGAGAATCGATTACTGAAGGACCACATACATTTCAGTTTGATGGATATGACAAATTCAGTTTCTATGCTAGAAGAGCATTTCTTGCAAATGCAAATTGATGTGGAGAAGAAATTCTTGACAATGTATTCTGATATTCTTGTGACTGGGCAGGAGATGCTATACTTTATGCACAACCTGAGGTCATCAGTAGAAGATATTTGCTCTCAAATGGTGGGTGAAGGGTTTATATCTTTTGTTCTGTACAATTGCTGTGTAACAGAGCTTGTCAGTAAATTTGCCTGCACTAGTGTGAACCGTGATTTACAATCAGCCAGACCAGGGGAATTGCATAAGTTGCCACAAATTTGCTCTAGTGTTGCAGCGCCAGCAATTAGTACAGGTAAAGAAGGTGCAGAGAAAAGAGATCAATGTGTGCTAATCCAAAAGGTGCAAGAGCAGCCAGACTTGCCCAATGTCAATGTATTATATGAAAATATGGCTCTTAGAAAGGAGTTAGAGAGGAAGCAAGAGCTATTAGAGGGCTTACTTTTTGACTTTAGGCTATTGCAGGAACAGGCTTCTAACAGCAAGGACATTAAGGATCAGACTGAGAAGTTAATATTTTCTCTAACCCAAGTTCGGTATGAGCTAGAGATTAAAGCAAGTCAGCTTGATGATATACTGGTTCAAAACAGAAAACTTGAAGGTTCTCTTGCTGACACTGAGAAGGCCTTAACTACATCAAATTATGACCTTCAACTTGCTAAAGAATCAATTGAGAAGCTTTCTAATCAAAATGTGGAGTTAAGGGAGCTTCTGAAAGAACTATATGCCAACAAAACTGAAGCTGATGGGAAATTGGAGGAACATAAAGAGGTGATTAGAGGTTTGGAAAAAGAAATTTCTAATTTGACAGCTTCACAGGAAAATCAATCACTTGCCTTGTTTGAAAGCATTGAGGATGAACTAAACCAGGTGATAATAGAGAGAGACCAACTCCATGAAGAAGTTTGCGTCTTGAATGGTAAGCTTGAGATGGCTTATTCCTTGGCTGACGAAAAGGAAGCTATTGCCATGGAAGCGCGTCAGGAGTCAGAGTCTAGTAAGCTGTTTGCTGAGCAAAAGGAAGAGGAAGTCAAGATTCTGGAACATTCTGTTGAGGAGCTTGAGTCTACCATAAATGTTTTAGAGAAAAAGGTACATGAAATGGATGAGGAGGTGGGAAGACATCGGTTAATTAGTGATTCACTGAGAATGGAACTCCAAGCTTTGAAAGAGAGATTATTGTTAGTTGACAATTTTCCCAAGAATGCTTATTCAGAAAGCACAAGTGGTCAAACTGATGAGCATATATCTAGACAACCCAGTAAAATACTGGAACTTCGCGAGGCACTAAGTCGGATAAGGTTTCTTGAAAAGGAAAATGCAGAACAAGATAAAGAGATTAAAAAGTGCAAAGAGTATATATCTGAAATTGTGTTGCATGCTGAAGCCCAAGCATTGCAGTACCAACAGAAGTACAAGTGCCTGGAGTCCATGTTCCATGAAGTCAAAACAGAAGTGTCAAATTCAACGTCAATGGTATCAGCATCAGAGAAAATTGAGAAAAGTTCAGTAAGGACAAGAGGTTCAAGCTCACCATTCAGATGCATTTCAAATATTGTTCAGCAGATGAATCAGGAGAAAGATCAAGAACTGTTAGTGTCAAGGCTCCGTGTGGAAGAACTAGAAGCACTTGCAGCTAGCCGGCAAAAGGAGGTATGCATGCTACAAACAAGGCTGGCTGCTACTGAAAGCATGACTCATGATGTCATTCGGGACCTTCTTGGTGTCAAATTGGACATTACCGACTATGCAAATTTGATAGACGAAAACCAAATTGTGAAATTAGTGGAGGAGGCTCATCATCATAGAGAAGAGTTCATTGCGAAGGAAAAAGAGAATCTCGATTTAAGACTGCAGATAAATGATCTCATTGAAGAAAGAGAATGCTGCATATCGGAACTGAAAACCAAAGAGGCAGATATACTTGCCACTCAGATAGCAATGCAGCAACTGCAAGAGCGAGATCAATTGCTTTCTGCACAAAATGAAATGTTGAAGATGGACAAGACCAATCTCATCAGGAAGGTTGCAGAATTAGATGACATGGTGAAAACACTAGTTGGGACACGAAATACCCAACCTGCTCCACAGTCATCAAAGACTAAGGACAAGGGTGCATTAAATTTGGGTAACGGTGGATACAATAAAAGGTTGTCTTTGTCTCAACCCGAACGACGCCTTTCTCGTTTTAATGACGAGCCTTCTCGTTACCGCAAATTTGCTGGTAATAATTCGCAAGGCTAA
>Glyma17g04300.2 sequence type=predicted peptide gene model=Glyma17g04300 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSKETRTSARRNPQTESNENEFEPCPPNQINFPPPRTPFSSIPDPSRFGNATPRLSVRFGKPHSEPNSAQSTPSRNTSRLSLGGGRLSSCAFVKETEFCVHVPHFDLKDDPSFWTDHNVQVLIRIRPLSNSEKVSQGHGRCLKQESAQTLVWLGHPETRFTFDHIGCETLSQENLFRVAGVPMVENCLSGYNSCMFAYGQTGSGKTYTMMGEIKETEGYLTEDSGITPRVFDYLFTRIKAEEERRKYYKLKYSCKCSFLEIYNEQITDLLEPSSTNLQLREDLKKGVYVENLTEHSVDTVYDVLRLLLQGTANRKVAATHMNCESSRSHSVFTCIIESQWEKDSMTHFRFARLNLVDLAGSERQKSSGADSERLKEAANINKSLSTLGLVIMTLVDLAHGKPRHVPYRDSRLTFLLQDSLGGNSKTMIIANVSPSICCANETLSTLKFAQRAKLIQNNAKVNEDASGDVSALQWQIQQLKGQLSFLMNNKKFPSSVPNLEPNPESCRLSEVSEEYESLGERVTTDHQLLIPSKEVRQKEEEIQHTSSMLRHYKEKIKQLELLVDGKLSAEKYLMEENRALQEEIQLLKVNIDKNSESSRLALENDRLLQQLQLFQNFYEHGERERLLTELSELRDQLLVHLQEKFTYSMKNENQDTDTAQELEECQNMNSKLLREVGILQANLGKYLNYNQILNSSFEHPGEILKTDKCSLVETISMRSDSGDEIPSSTWEADDALANIIEGNALRSSIMLAKDNEYNNEELEAKLEKMSKDLEEARLVNDQYQEKWALQLYQKRQTETICQEVEMETTNTILHLQEEVAHLQSEFEERLCTIAQENTELRNMVAEKEEEIRSRCLDWEKAILELTTFLLEGSRSLKDACGQVKNISCSFPQANAWISEHVDMAVKKYIEKEETIQQLQSSLKDAQKMVSDMELKISSLKEATVAFNALQQLDNNEGNEEVIELQVLLNEKTNMIRMLENEINHKNNQLCKVTKQADAAFLVAKWLSDCYNVAHMNDDIQDISIPELDVQARLGNCTISENQDVQNNLILNDLMAQVELTKLEVLEMENAVKASFVDTETQIEAFQTGVSGLYSAYRNLIQDIVKETQDTKKEIRDLKIYHRSSKGYRVDSLTSNANKCKEYANQHHTLHQIKEQLVEVNRRLNVIDNFIRAENMSSFQLLDEDLIDADDLSADSSSVSDLSTETDSFASGSKSHESTYTCNFKFPGKTTEQIVHLKSERCSVIQSHGSCKSSNTGKLVERRIHNEAVVCCLSKELNVTYDSFQRLYLRLSALLQELDDGSCFYPKELKKVAPYFQLEMQKDKAGCENDKEILGYMEIKPDDGFLTKFMEAHATVQEADLTLHALTEAYEDSKQLTAMWKQAGEDLMIERASLVEEIQKLKFSIFHKEEENRLLKDHIHFSLMDMTNSVSMLEEHFLQMQIDVEKKFLTMYSDILVTGQEMLYFMHNLRSSVEDICSQMVGEGFISFVLYNCCVTELVSKFACTSVNRDLQSARPGELHKLPQICSSVAAPAISTGKEGAEKRDQCVLIQKVQEQPDLPNVNVLYENMALRKELERKQELLEGLLFDFRLLQEQASNSKDIKDQTEKLIFSLTQVRYELEIKASQLDDILVQNRKLEGSLADTEKALTTSNYDLQLAKESIEKLSNQNVELRELLKELYANKTEADGKLEEHKEVIRGLEKEISNLTASQENQSLALFESIEDELNQVIIERDQLHEEVCVLNGKLEMAYSLADEKEAIAMEARQESESSKLFAEQKEEEVKILEHSVEELESTINVLEKKVHEMDEEVGRHRLISDSLRMELQALKERLLLVDNFPKNAYSESTSGQTDEHISRQPSKILELREALSRIRFLEKENAEQDKEIKKCKEYISEIVLHAEAQALQYQQKYKCLESMFHEVKTEVSNSTSMVSASEKIEKSSVRTRGSSSPFRCISNIVQQMNQEKDQELLVSRLRVEELEALAASRQKEVCMLQTRLAATESMTHDVIRDLLGVKLDITDYANLIDENQIVKLVEEAHHHREEFIAKEKENLDLRLQINDLIEERECCISELKTKEADILATQIAMQQLQERDQLLSAQNEMLKMDKTNLIRKVAELDDMVKTLVGTRNTQPAPQSSKTKDKGALNLGNGGYNKRLSLSQPERRLSRFNDEPSRYRKFAGNNSQG*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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