Glyma17g00333 - SoyBase

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Report for Sequence Feature Glyma17g00333

Feature Type:	gene_model
Chromosome:	Gm17
Start:	91724
stop:	93383
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma17g00333

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
UniRef100_G7KE52	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Non-specific lipid-transfer protein n=1 Tax=Medicago truncatula RepID=G7KE52_MEDTR	SoyBase	E_val: 2.00E-09	ISS
UniRef100_I1KR47	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1KR47_SOYBN	SoyBase	E_val: 2.00E-15	ISS

Expression Patterns of Glyma17g00333

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma17g00333 not represented in the dataset	Glyma17g00333 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma17g00333 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma17g00333

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma17g00333

Limit To All Plant Sequences

>Glyma17g00333.1   sequence type=CDS   gene model=Glyma17g00333   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTTTTGAATGTCAGCAAGGCCTCTCTACTCCTTGCTGCTTGCAAAGTCTCTACTCCTTCTGCCACTAACTATGGATTGTATAAAATGCATGCAGTTGCTCCTGCTGGAGGCCTCTCTCCACAAGCTTCTCCATCTCCAGCACTTGCTCAAGGGAACACAACATCAACATTATCCCCAATTTCAGTTGGATCTTTGCTTAATAAGAAGCGGAAATTGAAATTGAGATATGCAGAAGGAGTATCGGTTAAAGGCGCATATATACATACTTTTGTGGAAGAAAGTTGTTCTTGGAGAGGCAAGCTTGAATGTCACAAGCCTCTTTCTTGCACGGCTCCTTGCTTGCCTGCGCCATCCTCTCTCAAAGATTCTGTGCGTATGCCGCCTCGGGATTGA

Predicted protein sequences of Glyma17g00333

Limit To All Plant Sequences

>Glyma17g00333.1   sequence type=predicted peptide   gene model=Glyma17g00333   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVLNVSKASLLLAACKVSTPSATNYGLYKMHAVAPAGGLSPQASPSPALAQGNTTSTLSPISVGSLLNKKRKLKLRYAEGVSVKGAYIHTFVEESCSWRGKLECHKPLSCTAPCLPAPSSLKDSVRMPPRD*

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