Report for Sequence Feature Glyma16g34560
Feature Type: gene_model
Chromosome: Gm16
Start: 37180137
stop: 37183351
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma16g34560
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G59960 AT
Annotation by Michelle Graham. TAIR10: NAD(P)-linked oxidoreductase superfamily protein | chr1:22071410-22073067 REVERSE LENGTH=326
SoyBase E_val: 1.00E-114 ISS
GO:0009651 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to salt stress
SoyBase N/A ISS
GO:0055114 GO-bp
Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process
SoyBase N/A ISS
GO:0005829 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytosol
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0016491 GO-mf
Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity
SoyBase N/A ISS
KOG1577
KOG
Aldo/keto reductase family proteins
JGI ISS
PTHR11732 Panther
ALDO/KETO REDUCTASE
JGI ISS
PTHR11732:SF34 Panther
3-CHLOROBENZOATE-3,4-DIOXYGENASE DYHYDROGENASE-RELATED
JGI ISS
PF00248 PFAM
Aldo/keto reductase family
JGI ISS
UniRef100_G7JL30 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: NAD(P)H-dependent 6'-deoxychalcone synthase n=1 Tax=Medicago truncatula RepID=G7JL30_MEDTR
SoyBase E_val: 6.00E-163 ISS
UniRef100_I1MQN4 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1MQN4_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma16g34560
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma16g34560
Paralog Evidence Comments
Glyma09g29991 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma16g34560 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.16g219400 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma16g34560
Transcripts of Glyma16g34560
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma16g34560.2 sequence type=transcript gene model=Glyma16g34560 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ACAAAAATGCGAAGGGGGAAAATTCAGTTAATTTGGCAGATATTAATCCATGTTTCTAGTTTTCTACGTAGGCATAGCATAACGTGTGAATACAAACAATTGACTTACTAGATAAAACTTCCATATATACTAACAACATTCAACACGTATCAGCAGACCCAAAAGAAGATATGGAAGCAAAGAAAATCCCAGAAGTGATACTAAACTCAGGGAAAAAGATGCCAGTGATAGGCCTAGGAACCGCATCAATTCCTCTTCCATCACATGAAGCTCTCACCTCCATCCTTATTGATGCCTTTGAGGTTGGCTACAGACACTTTGATACTGCTTCTCTGTATGAAAGTGAGGAGTCTCTAGGCAAAGCTGTGGCAAAGGCCTTAGAGCTAGGCCTCATAAATAGCAGAGAGGAATTATTCATCACATCAAAACTATGGTCCACTGATGCTCATCCTGACCTTGTTGTTCCAGCTCTTAAGACCTCCCTGCAGAAGTTGGGATTGGAGTATGTAGATCTCTATTTGATTCATTGGCCAGTGAGGCTGAAACCTGAAGCCAAAGGGTACCATAATATATTAAAGGAGAATGTGCTTCCCTCCTTTGACATGAAAGGAATATGGGAGGCTATGGAAGAGTGTTACAGATTGGGCTTAGCCAAGTCTATTGGTGTTAGCAACTTCGGCATCAAAAAGCTAAGCCAGCTCCTGGAAAATGCAACCATCCCTCCTGCTGTCAATCAGGTGGAAATGAGCCCAGCATGGCAGCAGGGGAAACTCAAAGAATTCTGCAAGCAGAAAGGAATTCATGTGAGTGCATGGTCACCACTAGGAGCTTACAAAAGTGCTCAAGGTACAAATGCAGTTATGGAGAGCCCAATCCTTAAGGAAATTGCTTGTGAACGACAGAAGAGCATGGCTCAGGTGCTCTTAGTATCTCAGTCTTAAATCATCATCCATTACAACTCTACTTTTTTTTACCATGAATTTCAAAATCTATAACAAAATATAATGGCAATAAGATCTTCTAGTCTCTACTCTTTTTTTCATGTCTTTAGCCAAGTACATATTTGAAGTGTAACATTTCTTTATTTCTACCATTCAATAAAAATAAACTGAGGTGTATGCTCAACCTTGACCATTTAGAACAAGTTTCAGCAGCACTATCCAATAACTTTAACTTGAATGAGAGTAGTATTTATGGGTGTGTAAGTTTGTGCTAGCATGGTTACTCAACTCAAGATATAAATATATTTTTTTATAGTTGATGGTTCAAAAGAAAACTATAAGTATATTTGCAATGGGCAATGTCATTGTCATGCAGATTGCACTAAGATGGATATATGAGCAAGGGGCAATTGCAATTGTGAAAAGCTTCAACAAGGAGAGGATGAAACAAAACCTTGACATATTTGACTGGGAACTGAGCCAAGAGGAATCACAGAAATTCAGCCAGATTCCGCAGCGTAGGATGTATCGCGGAATAACTTTTGTATCAGAAAATGGGCCTTACAAGACCTTGGAAGAGCTTTGGGATTGAGATTCCTGAAATCATTCCTAATAGCAGCAAAATGTCATATAAGGCTGTGTTTGGTTTAAGATGGGAGGAGGGAACTAGGAGAGAAATTTTGTACTTTTCATGTGGAACTCACATCTTTTACACTTTAATAAAACAAAAAAAATCTTCTATTTCTATCCTCTAAACCAAACACACCCTAAATGTGTATCTCTATATTTACGTATGCAACCCATGGCATGGATTCATCAATGTTGCCGGGCCATTTAAAGGAATAAGATGGATAGAAAAAGAATTCCTGGCATTTTAATAAAAACTCACTTTATATTCTTCCCTTGTTCTTAAAATTTCACACACACACGTGATACTTCTAGATCTCCAAGACAGTTTATTGCTTCATCGATCAAAATTAGCCTAACAACAAAATTAGGCTAATGCTTCATCGAACAAACCCTCTCTACAAAGTCTATCGATCATAACAGTATACAACGGGACATCAAGTTGATAGCCTTTAATCAAGAGATCCTGAAAAACCTCTTGTGCATTGTTGAGGACTACCTTCATTCTCATCATGCATCCTTAAGCCTTTCACCTTTACACAGCCCATCAATAAATATTGTATATGTGTAATATATTTGGCTGAATTCCCTGGTCTTCAGTTTTATTGAATAATGCAGTTGCTCTATCAAGATGACAATTTTTGCACAAAGCATCAAATAAGGAATTGTAAGTGATTATATTGTCATGTAGACCTCTAAAAACTTTATTTGTA
>Glyma16g34560.3 sequence type=transcript gene model=Glyma16g34560 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ACAAAAATGCGAAGGGGGAAAATTCAGTTAATTTGGCAGATATTAATCCATGTTTCTAGTTTTCTACGTAGGCATAGCATAACGTGTGAATACAAACAATTGACTTACTAGATAAAACTTCCATATATACTAACAACATTCAACACGTATCAGCAGACCCAAAAGAAGATATGGAAGCAAAGAAAATCCCAGAAGTGATACTAAACTCAGGGAAAAAGATGCCAGTGATAGGCCTAGGAACCGCATCAATTCCTCTTCCATCACATGAAGCTCTCACCTCCATCCTTATTGATGCCTTTGAGGTTGGCTACAGACACTTTGATACTGCTTCTCTGTATGAAAGTGAGGAGTCTCTAGGCAAAGCTGTGGCAAAGGCCTTAGAGCTAGGCCTCATAAATAGCAGAGAGGAATTATTCATCACATCAAAACTATGGTCCACTGATGCTCATCCTGACCTTGTTGTTCCAGCTCTTAAGACCTCCCTGCAGAAGTTGGGATTGGAGTATGTAGATCTCTATTTGATTCATTGGCCAGTGAGGCTGAAACCTGAAGCCAAAGGGTACCATAATATATTAAAGGAGAATGTGCTTCCCTCCTTTGACATGAAAGGAATATGGGAGGCTATGGAAGAGTGTTACAGATTGGGCTTAGCCAAGTCTATTGGTGTTAGCAACTTCGGCATCAAAAAGCTAAGCCAGCTCCTGGAAAATGCAACCATCCCTCCTGCTGTCAATCAGGTATGAAGTTTTAGCAATTGCATGCAGGTTGATATTTACGCAGCAATGAAACACTTGGCGGTGTTGATTCCTTCCATTGGTTTTAGGTGGAAATGAGCCCAGCATGGCAGCAGGGGAAACTCAAAGAATTCTGCAAGCAGAAAGGAATTCATGTGAGTGCATGGTCACCACTAGGAGCTTACAAAAGTGCTCAAGGTACAAATGCAGTTATGGAGAGCCCAATCCTTAAGGAAATTGCTTGTGAACGACAGAAGAGCATGGCTCAGATTGCACTAAGATGGATATATGAGCAAGGGGCAATTGCAATTGTGAAAAGCTTCAACAAGGAGAGGATGAAACAAAACCTTGACATATTTGACTGGGAACTGAGCCAAGAGGAATCACAGAAATTCAGCCAGATTCCGCAGCGTAGGATGTATCGCGGAATAACTTTTGTATCAGAAAATGGGCCTTACAAGACCTTGGAAGAGCTTTGGGATTGAGATTCCTGAAATCATTCCTAATAGCAGCAAAATGTCATATAAGGCTGTGTTTGGTTTAAGATGGGAGGAGGGAACTAGGAGAGAAATTTTGTACTTTTCATGTGGAACTCACATCTTTTACACTTTAATAAAACAAAAAAAATCTTCTATTTCTATCCTCTAAACCAAACACACCCTAAATGTGTATCTCTATATTTACGTATGCAACCCATGGCATGGATTCATCAATGTTGCCGGGCCATTTAAAGGAATAAGATGGATAGAAAAAGAATTCCTGGCATTTTAATAAAAACTCACTTTATATTCTTCCCTTGTTCTTAAAATTTCACACACACACGTGATACTTCTAGATCTCCAAGACAGTTTATTGCTTCATCGATCAAAATTAGCCTAACAACAAAATTAGGCTAATGCTTCATCGAACAAACCCTCTCTACAAAGTCTATCGATCATAACAGTATACAACGGGACATCAAGTTGATAGCCTTTAATCAAGAGATCCTGAAAAACCTCTTGTGCATTGTTGAGGACTACCTTCATTCTCATCATGCATCCTTAAGCCTTTCACCTTTACACAGCCCATCAATAAATATTGTATATGTGTAATATATTTGGCTGAATTCCCTGGTCTTCAGTTTTATTGAATAATGCAGTTGCTCTATCAAGATGACAATTTTTGCACAAAGCATCAAATAAGGAATTGTAAGTGATTATATTGTCATGTAGACCTCTAAAAACTTTATTTGTA
>Glyma16g34560.4 sequence type=transcript gene model=Glyma16g34560 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
TCTATACTTTGTTTCTCTGGTTGCATCCTATGTAATTATAAGTTTCCTCAAAACTGTTTAGGAAGTTGGGATTGGAGTATGTAGATCTCTATTTGATTCATTGGCCAGTGAGGCTGAAACCTGAAGCCAAAGGGTACCATAATATATTAAAGGAGAATGTGCTTCCCTCCTTTGACATGAAAGGAATATGGGAGGCTATGGAAGAGTGTTACAGATTGGGCTTAGCCAAGTCTATTGGTGTTAGCAACTTCGGCATCAAAAAGCTAAGCCAGCTCCTGGAAAATGCAACCATCCCTCCTGCTGTCAATCAGGTGGAAATGAGCCCAGCATGGCAGCAGGGGAAACTCAAAGAATTCTGCAAGCAGAAAGGAATTCATGTGAGTGCATGGTCACCACTAGGAGCTTACAAAAGTGCTCAAGGTACAAATGCAGTTATGGAGAGCCCAATCCTTAAGGAAATTGCTTGTGAACGACAGAAGAGCATGGCTCAGATTGCACTAAGATGGATATATGAGCAAGGGGCAATTGCAATTGTGAAAAGCTTCAACAAGGAGAGGATGAAACAAAACCTTGACATATTTGACTGGGAACTGAGCCAAGAGGAATCACAGAAATTCAGCCAGATTCCGCAGCGTAGGATGTATCGCGGAATAACTTTTGTATCAGAAAATGGGCCTTACAAGACCTTGGAAGAGCTTTGGGATTGAGATTCCTGAAATCATTCCTAATAGCAGCAAAATGTCATATAAGGCTGTGTTTGGTTTAAGATGGGAGGAGGGAACTAGGAGAGAAATTTTGTACTTTTCATGTGGAACTCACATCTTTTACACTTTAATAAAACAAAAAAAATCTTCTATTTCTATCCTCTAAACCAAACACACCCTAAATGTGTATCTCTATATTTACGTATGCAACCCATGGCATGGATTCATCAATGTTGCCGGGCCATTTAAAGGAATAAGATGGATAGAAAAAGAATTCCTGGCATTTTAATAAAAACTCACTTTATATTCT
Coding sequences of Glyma16g34560
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma16g34560.1 sequence type=CDS gene model=Glyma16g34560 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAAGCAAAGAAAATCCCAGAAGTGATACTAAACTCAGGGAAAAAGATGCCAGTGATAGGCCTAGGAACCGCATCAATTCCTCTTCCATCACATGAAGCTCTCACCTCCATCCTTATTGATGCCTTTGAGGTTGGCTACAGACACTTTGATACTGCTTCTCTGTATGAAAGTGAGGAGTCTCTAGGCAAAGCTGTGGCAAAGGCCTTAGAGCTAGGCCTCATAAATAGCAGAGAGGAATTATTCATCACATCAAAACTATGGTCCACTGATGCTCATCCTGACCTTGTTGTTCCAGCTCTTAAGACCTCCCTGCAGAAGTTGGGATTGGAGTATGTAGATCTCTATTTGATTCATTGGCCAGTGAGGCTGAAACCTGAAGCCAAAGGGTACCATAATATATTAAAGGAGAATGTGCTTCCCTCCTTTGACATGAAAGGAATATGGGAGGCTATGGAAGAGTGTTACAGATTGGGCTTAGCCAAGTCTATTGGTGTTAGCAACTTCGGCATCAAAAAGCTAAGCCAGCTCCTGGAAAATGCAACCATCCCTCCTGCTGTCAATCAGGTGGAAATGAGCCCAGCATGGCAGCAGGGGAAACTCAAAGAATTCTGCAAGCAGAAAGGAATTCATGTGAGTGCATGGTCACCACTAGGAGCTTACAAAAGTGCTCAAGGTACAAATGCAGTTATGGAGAGCCCAATCCTTAAGGAAATTGCTTGTGAACGACAGAAGAGCATGGCTCAGATTGCACTAAGATGGATATATGAGCAAGGGGCAATTGCAATTGTGAAAAGCTTCAACAAGGAGAGGATGAAACAAAACCTTGACATATTTGACTGGGAACTGAGCCAAGAGGAATCACAGAAATTCAGCCAGATTCCGCAGCGTAGGATGTATCGCGGAATAACTTTTGTATCAGAAAATGGGCCTTACAAGACCTTGGAAGAGCTTTGGGATTGA
>Glyma16g34560.2 sequence type=CDS gene model=Glyma16g34560 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAAGCAAAGAAAATCCCAGAAGTGATACTAAACTCAGGGAAAAAGATGCCAGTGATAGGCCTAGGAACCGCATCAATTCCTCTTCCATCACATGAAGCTCTCACCTCCATCCTTATTGATGCCTTTGAGGTTGGCTACAGACACTTTGATACTGCTTCTCTGTATGAAAGTGAGGAGTCTCTAGGCAAAGCTGTGGCAAAGGCCTTAGAGCTAGGCCTCATAAATAGCAGAGAGGAATTATTCATCACATCAAAACTATGGTCCACTGATGCTCATCCTGACCTTGTTGTTCCAGCTCTTAAGACCTCCCTGCAGAAGTTGGGATTGGAGTATGTAGATCTCTATTTGATTCATTGGCCAGTGAGGCTGAAACCTGAAGCCAAAGGGTACCATAATATATTAAAGGAGAATGTGCTTCCCTCCTTTGACATGAAAGGAATATGGGAGGCTATGGAAGAGTGTTACAGATTGGGCTTAGCCAAGTCTATTGGTGTTAGCAACTTCGGCATCAAAAAGCTAAGCCAGCTCCTGGAAAATGCAACCATCCCTCCTGCTGTCAATCAGGTGGAAATGAGCCCAGCATGGCAGCAGGGGAAACTCAAAGAATTCTGCAAGCAGAAAGGAATTCATGTGAGTGCATGGTCACCACTAGGAGCTTACAAAAGTGCTCAAGGTACAAATGCAGTTATGGAGAGCCCAATCCTTAAGGAAATTGCTTGTGAACGACAGAAGAGCATGGCTCAGGTGCTCTTAGTATCTCAGTCTTAA
>Glyma16g34560.3 sequence type=CDS gene model=Glyma16g34560 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAAGCAAAGAAAATCCCAGAAGTGATACTAAACTCAGGGAAAAAGATGCCAGTGATAGGCCTAGGAACCGCATCAATTCCTCTTCCATCACATGAAGCTCTCACCTCCATCCTTATTGATGCCTTTGAGGTTGGCTACAGACACTTTGATACTGCTTCTCTGTATGAAAGTGAGGAGTCTCTAGGCAAAGCTGTGGCAAAGGCCTTAGAGCTAGGCCTCATAAATAGCAGAGAGGAATTATTCATCACATCAAAACTATGGTCCACTGATGCTCATCCTGACCTTGTTGTTCCAGCTCTTAAGACCTCCCTGCAGAAGTTGGGATTGGAGTATGTAGATCTCTATTTGATTCATTGGCCAGTGAGGCTGAAACCTGAAGCCAAAGGGTACCATAATATATTAAAGGAGAATGTGCTTCCCTCCTTTGACATGAAAGGAATATGGGAGGCTATGGAAGAGTGTTACAGATTGGGCTTAGCCAAGTCTATTGGTGTTAGCAACTTCGGCATCAAAAAGCTAAGCCAGCTCCTGGAAAATGCAACCATCCCTCCTGCTGTCAATCAGGTATGA
>Glyma16g34560.4 sequence type=CDS gene model=Glyma16g34560 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAAAGGAATATGGGAGGCTATGGAAGAGTGTTACAGATTGGGCTTAGCCAAGTCTATTGGTGTTAGCAACTTCGGCATCAAAAAGCTAAGCCAGCTCCTGGAAAATGCAACCATCCCTCCTGCTGTCAATCAGGTGGAAATGAGCCCAGCATGGCAGCAGGGGAAACTCAAAGAATTCTGCAAGCAGAAAGGAATTCATGTGAGTGCATGGTCACCACTAGGAGCTTACAAAAGTGCTCAAGGTACAAATGCAGTTATGGAGAGCCCAATCCTTAAGGAAATTGCTTGTGAACGACAGAAGAGCATGGCTCAGATTGCACTAAGATGGATATATGAGCAAGGGGCAATTGCAATTGTGAAAAGCTTCAACAAGGAGAGGATGAAACAAAACCTTGACATATTTGACTGGGAACTGAGCCAAGAGGAATCACAGAAATTCAGCCAGATTCCGCAGCGTAGGATGTATCGCGGAATAACTTTTGTATCAGAAAATGGGCCTTACAAGACCTTGGAAGAGCTTTGGGATTGA
Predicted protein sequences of Glyma16g34560
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma16g34560.1 sequence type=predicted peptide gene model=Glyma16g34560 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEAKKIPEVILNSGKKMPVIGLGTASIPLPSHEALTSILIDAFEVGYRHFDTASLYESEESLGKAVAKALELGLINSREELFITSKLWSTDAHPDLVVPALKTSLQKLGLEYVDLYLIHWPVRLKPEAKGYHNILKENVLPSFDMKGIWEAMEECYRLGLAKSIGVSNFGIKKLSQLLENATIPPAVNQVEMSPAWQQGKLKEFCKQKGIHVSAWSPLGAYKSAQGTNAVMESPILKEIACERQKSMAQIALRWIYEQGAIAIVKSFNKERMKQNLDIFDWELSQEESQKFSQIPQRRMYRGITFVSENGPYKTLEELWD*
>Glyma16g34560.2 sequence type=predicted peptide gene model=Glyma16g34560 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEAKKIPEVILNSGKKMPVIGLGTASIPLPSHEALTSILIDAFEVGYRHFDTASLYESEESLGKAVAKALELGLINSREELFITSKLWSTDAHPDLVVPALKTSLQKLGLEYVDLYLIHWPVRLKPEAKGYHNILKENVLPSFDMKGIWEAMEECYRLGLAKSIGVSNFGIKKLSQLLENATIPPAVNQVEMSPAWQQGKLKEFCKQKGIHVSAWSPLGAYKSAQGTNAVMESPILKEIACERQKSMAQVLLVSQS*
>Glyma16g34560.3 sequence type=predicted peptide gene model=Glyma16g34560 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEAKKIPEVILNSGKKMPVIGLGTASIPLPSHEALTSILIDAFEVGYRHFDTASLYESEESLGKAVAKALELGLINSREELFITSKLWSTDAHPDLVVPALKTSLQKLGLEYVDLYLIHWPVRLKPEAKGYHNILKENVLPSFDMKGIWEAMEECYRLGLAKSIGVSNFGIKKLSQLLENATIPPAVNQV*
>Glyma16g34560.4 sequence type=predicted peptide gene model=Glyma16g34560 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MKGIWEAMEECYRLGLAKSIGVSNFGIKKLSQLLENATIPPAVNQVEMSPAWQQGKLKEFCKQKGIHVSAWSPLGAYKSAQGTNAVMESPILKEIACERQKSMAQIALRWIYEQGAIAIVKSFNKERMKQNLDIFDWELSQEESQKFSQIPQRRMYRGITFVSENGPYKTLEELWD*