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Report for Sequence Feature Glyma16g32960
Feature Type: gene_model
Chromosome: Gm16
Start: 36049256
stop: 36053737
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma16g32960
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G36530 AT
Annotation by Michelle Graham. TAIR10: Enolase | chr2:15321081-15323786 REVERSE LENGTH=444
SoyBase E_val: 0 ISS
GO:0006094 GO-bp
Annotation by Michelle Graham. GO Biological Process: gluconeogenesis
SoyBase N/A ISS
GO:0006096 GO-bp
Annotation by Michelle Graham. GO Biological Process: glycolysis
SoyBase N/A ISS
GO:0006098 GO-bp
Annotation by Michelle Graham. GO Biological Process: pentose-phosphate shunt
SoyBase N/A ISS
GO:0009409 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to cold
SoyBase N/A ISS
GO:0009416 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to light stimulus
SoyBase N/A ISS
GO:0009651 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to salt stress
SoyBase N/A ISS
GO:0009737 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to abscisic acid stimulus
SoyBase N/A ISS
GO:0009853 GO-bp
Annotation by Michelle Graham. GO Biological Process: photorespiration
SoyBase N/A ISS
GO:0046686 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to cadmium ion
SoyBase N/A ISS
GO:0000015 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: phosphopyruvate hydratase complex
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0005739 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion
SoyBase N/A ISS
GO:0005740 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrial envelope
SoyBase N/A ISS
GO:0005829 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytosol
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0009506 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0016020 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: membrane
SoyBase N/A ISS
GO:0048046 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: apoplast
SoyBase N/A ISS
GO:0000287 GO-mf
Annotation by Michelle Graham. GO Molecular Function: magnesium ion binding
SoyBase N/A ISS
GO:0003677 GO-mf
Annotation by Michelle Graham. GO Molecular Function: DNA binding
SoyBase N/A ISS
GO:0004634 GO-mf
Annotation by Michelle Graham. GO Molecular Function: phosphopyruvate hydratase activity
SoyBase N/A ISS
GO:0005507 GO-mf
Annotation by Michelle Graham. GO Molecular Function: copper ion binding
SoyBase N/A ISS
KOG2670
KOG
Enolase
JGI ISS
PTHR11902 Panther
ENOLASE
JGI ISS
PF00113 PFAM
Enolase, C-terminal TIM barrel domain
JGI ISS
PF03952 PFAM
Enolase, N-terminal domain
JGI ISS
UniRef100_B9R9N6 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Enolase, putative n=1 Tax=Ricinus communis RepID=B9R9N6_RICCO
SoyBase E_val: 0 ISS
UniRef100_I1MQ89 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MQ89_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma16g32960
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma16g32960
Paralog Evidence Comments
Glyma09g28100 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma16g32960 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.16g204600 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma16g32960
Transcripts of Glyma16g32960
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma16g32960.2 sequence type=transcript gene model=Glyma16g32960 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
GTGTTGGAGCTGATGACAAGATTTCATATTTGCCTTGGATTAGGCTGTGGAGAATGTTAATTCAATTATAGCACCTGCTCTGCTTGGCAAGGACCCAACCAAGCAGACTGAAATTGACAATTTTATGGTACAGCAGCTTGATGGAACTGTTAATGAATGGGGATGGTGTAAGCAGAAGCTTGGAGCTAATGCTATTTTGGCAGTGTCACTTGCTGTCTGTAAGGCTGGTGCTGCAGTGAAGAAAATTCCTCTGTACAAGCACATTGCTAATCTGGCTGGAAACAAGACTTTGGTACTACCTGTGCCTTCATTCAATGTTATCAATGGAGGCTCACATGCAGGAAATAAGCTAGCAATGCAGGAATTTATGATTCTCCCTGTTGGGGCATCTTCCTTCAAAGAAGCCATGAAAATGGGCGTAGAAGTATACCATCATCTAAAGGCTGTGATTAAAAAGAAATACGGACAGGATGCTACTAACGTTGGTGATGAAGGTGGCTTTGCTCCTAATATCCAGGAAAACAAAGAAGGTCTTGAACTTCTGAAGACTGCCATTGCTAAAGCTGGTTACACTGGAAAGGTTGTAATTGGGATGGATGTTGCTGCTTCAGAATTTTACGATAACAAGGATAAAACCTATGACTTGAATTTTAAGGAAGAGAATAATGATGGATCACAGAAAATCTCAGGAGACAGCTTAAAGAATGTGTACAAATCATATGTGACAGATTATCCAATTGTGTCCATTGAGGATCCATTTGATCAGGATGACTGGGAGCACTATGCGAAATTAACAGCTGAAGTTGGCCAGCAAGTGCAGATTGTTGGTGATGATCTCCTCGTCACCAACCCGAAGCGTGTGGAGAAAGCAATCAAGGAGAAGGCTTGCAATGCCCTTCTGTTGAAGGTGAATCAAATTGGTAGTGTAACTGAAAGTATTGAAGCTGTGAGAATGTCTAAACAAGCTGGTTGGGGTGTCATGGCTAGCCACAGGAGTGGTGAAACTGAGGATACCTTCATTGCTGACCTATCAGTTGGATTAGCAACTGGCCAGATCAAGACTGGAGCTCCCTGCCGATCTGAAAGGCTTGCCAAGTACAACCAGCTTCTGAGGATTGAGGAGGAACTGGGTTCTGCGGCTGTCTATGCTGGTGCCAAATTCAGAGCCCCAGTGGAACCCTATTGATTGTTTAGCCCAAGATCATTAAGCAACATTTGAATAAGATTCTATTGATGACTGCATGGCGCATGTATTTTTTGCGAAAATTAAACTTGACTACTATCAAGAGAACATAGGTTTTTCGAGCGTGGAATTTTGAAGCGAGAAAATAGGGCAGTAGCCAATAAATGTGTCTATGGTTTGGCTTGTTATAACAATTATCATGTGTAGTACAAATTTTGGATGAATTACGTCTAAATTGATTTTCCTGCAAATTACTAATTGTGAAATCGAAGGCCTATGCTGTCGATCATGTGGTGATCTAAGCTCTGCTCGTTCCTCCTTTGAAGTTTATGTTTGTCATCAATTGACGCCTAACTTATTTGAAATCTGGCTTTTTAGTTTTAGTTCTATCATCCTCGCTGTTGGCAATGGTATATTCGTCGAGGCGTTATTCTATTTAAAATC
Coding sequences of Glyma16g32960
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma16g32960.1 sequence type=CDS gene model=Glyma16g32960 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCAACGATCAAGGCCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTTGAAGTTGACGTTATTCTCAGCGATGGAACCTTCCACAGAGCTGCTGTCCCTAGCGGCGCTTCAACAGGTGTTTATGAGGCTTTGGAATTGAGGGATGGAGGCTCAGACTACCTCGGGAAAGGTGTTCTTAAGGCTGTGGAGAATGTTAATTCAATTATAGCACCTGCTCTGCTTGGCAAGGACCCAACCAAGCAGACTGAAATTGACAATTTTATGGTACAGCAGCTTGATGGAACTGTTAATGAATGGGGATGGTGTAAGCAGAAGCTTGGAGCTAATGCTATTTTGGCAGTGTCACTTGCTGTCTGTAAGGCTGGTGCTGCAGTGAAGAAAATTCCTCTGTACAAGCACATTGCTAATCTGGCTGGAAACAAGACTTTGGTACTACCTGTGCCTTCATTCAATGTTATCAATGGAGGCTCACATGCAGGAAATAAGCTAGCAATGCAGGAATTTATGATTCTCCCTGTTGGGGCATCTTCCTTCAAAGAAGCCATGAAAATGGGCGTAGAAGTATACCATCATCTAAAGGCTGTGATTAAAAAGAAATACGGACAGGATGCTACTAACGTTGGTGATGAAGGTGGCTTTGCTCCTAATATCCAGGAAAACAAAGAAGGTCTTGAACTTCTGAAGACTGCCATTGCTAAAGCTGGTTACACTGGAAAGGTTGTAATTGGGATGGATGTTGCTGCTTCAGAATTTTACGATAACAAGGATAAAACCTATGACTTGAATTTTAAGGAAGAGAATAATGATGGATCACAGAAAATCTCAGGAGACAGCTTAAAGAATGTGTACAAATCATATGTGACAGATTATCCAATTGTGTCCATTGAGGATCCATTTGATCAGGATGACTGGGAGCACTATGCGAAATTAACAGCTGAAGTTGGCCAGCAAGTGCAGATTGTTGGTGATGATCTCCTCGTCACCAACCCGAAGCGTGTGGAGAAAGCAATCAAGGAGAAGGCTTGCAATGCCCTTCTGTTGAAGGTGAATCAAATTGGTAGTGTAACTGAAAGTATTGAAGCTGTGAGAATGTCTAAACAAGCTGGTTGGGGTGTCATGGCTAGCCACAGGAGTGGTGAAACTGAGGATACCTTCATTGCTGACCTATCAGTTGGATTAGCAACTGGCCAGATCAAGACTGGAGCTCCCTGCCGATCTGAAAGGCTTGCCAAGTACAACCAGCTTCTGAGGATTGAGGAGGAACTGGGTTCTGCGGCTGTCTATGCTGGTGCCAAATTCAGAGCCCCAGTGGAACCCTATTGA
>Glyma16g32960.2 sequence type=CDS gene model=Glyma16g32960 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTACAGCAGCTTGATGGAACTGTTAATGAATGGGGATGGTGTAAGCAGAAGCTTGGAGCTAATGCTATTTTGGCAGTGTCACTTGCTGTCTGTAAGGCTGGTGCTGCAGTGAAGAAAATTCCTCTGTACAAGCACATTGCTAATCTGGCTGGAAACAAGACTTTGGTACTACCTGTGCCTTCATTCAATGTTATCAATGGAGGCTCACATGCAGGAAATAAGCTAGCAATGCAGGAATTTATGATTCTCCCTGTTGGGGCATCTTCCTTCAAAGAAGCCATGAAAATGGGCGTAGAAGTATACCATCATCTAAAGGCTGTGATTAAAAAGAAATACGGACAGGATGCTACTAACGTTGGTGATGAAGGTGGCTTTGCTCCTAATATCCAGGAAAACAAAGAAGGTCTTGAACTTCTGAAGACTGCCATTGCTAAAGCTGGTTACACTGGAAAGGTTGTAATTGGGATGGATGTTGCTGCTTCAGAATTTTACGATAACAAGGATAAAACCTATGACTTGAATTTTAAGGAAGAGAATAATGATGGATCACAGAAAATCTCAGGAGACAGCTTAAAGAATGTGTACAAATCATATGTGACAGATTATCCAATTGTGTCCATTGAGGATCCATTTGATCAGGATGACTGGGAGCACTATGCGAAATTAACAGCTGAAGTTGGCCAGCAAGTGCAGATTGTTGGTGATGATCTCCTCGTCACCAACCCGAAGCGTGTGGAGAAAGCAATCAAGGAGAAGGCTTGCAATGCCCTTCTGTTGAAGGTGAATCAAATTGGTAGTGTAACTGAAAGTATTGAAGCTGTGAGAATGTCTAAACAAGCTGGTTGGGGTGTCATGGCTAGCCACAGGAGTGGTGAAACTGAGGATACCTTCATTGCTGACCTATCAGTTGGATTAGCAACTGGCCAGATCAAGACTGGAGCTCCCTGCCGATCTGAAAGGCTTGCCAAGTACAACCAGCTTCTGAGGATTGAGGAGGAACTGGGTTCTGCGGCTGTCTATGCTGGTGCCAAATTCAGAGCCCCAGTGGAACCCTATTGA
Predicted protein sequences of Glyma16g32960
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma16g32960.1 sequence type=predicted peptide gene model=Glyma16g32960 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MATIKAVKARQIFDSRGNPTVEVDVILSDGTFHRAAVPSGASTGVYEALELRDGGSDYLGKGVLKAVENVNSIIAPALLGKDPTKQTEIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAAVKKIPLYKHIANLAGNKTLVLPVPSFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKTAIAKAGYTGKVVIGMDVAASEFYDNKDKTYDLNFKEENNDGSQKISGDSLKNVYKSYVTDYPIVSIEDPFDQDDWEHYAKLTAEVGQQVQIVGDDLLVTNPKRVEKAIKEKACNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSAAVYAGAKFRAPVEPY*
>Glyma16g32960.2 sequence type=predicted peptide gene model=Glyma16g32960 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAAVKKIPLYKHIANLAGNKTLVLPVPSFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKTAIAKAGYTGKVVIGMDVAASEFYDNKDKTYDLNFKEENNDGSQKISGDSLKNVYKSYVTDYPIVSIEDPFDQDDWEHYAKLTAEVGQQVQIVGDDLLVTNPKRVEKAIKEKACNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSAAVYAGAKFRAPVEPY*