Report for Sequence Feature Glyma16g32710
Feature Type: gene_model
Chromosome: Gm16
Start: 35857554
stop: 35862803
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma16g32710
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G05200 AT
Annotation by Michelle Graham. TAIR10: cysteine-rich RLK (RECEPTOR-like protein kinase) 25 | chr4:2679793-2682309 REVERSE LENGTH=675
SoyBase E_val: 1.00E-177 ISS
GO:0000041 GO-bp
Annotation by Michelle Graham. GO Biological Process: transition metal ion transport
SoyBase N/A ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0006826 GO-bp
Annotation by Michelle Graham. GO Biological Process: iron ion transport
SoyBase N/A ISS
GO:0010106 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellular response to iron ion starvation
SoyBase N/A ISS
GO:0010167 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to nitrate
SoyBase N/A ISS
GO:0010413 GO-bp
Annotation by Michelle Graham. GO Biological Process: glucuronoxylan metabolic process
SoyBase N/A ISS
GO:0015706 GO-bp
Annotation by Michelle Graham. GO Biological Process: nitrate transport
SoyBase N/A ISS
GO:0045492 GO-bp
Annotation by Michelle Graham. GO Biological Process: xylan biosynthetic process
SoyBase N/A ISS
GO:0005576 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: extracellular region
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0004674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0016301 GO-mf
Annotation by Michelle Graham. GO Molecular Function: kinase activity
SoyBase N/A ISS
GO:0016772 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups
SoyBase N/A ISS
KOG1187
KOG
Serine/threonine protein kinase
JGI ISS
PTHR24420 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24420:SF430 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00069 PFAM
Protein kinase domain
JGI ISS
PF01657 PFAM
Domain of unknown function DUF26
JGI ISS
UniRef100_G7KMF5 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Cysteine-rich receptor-like protein kinase n=1 Tax=Medicago truncatula RepID=G7KMF5_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1MQ67 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MQ67_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma16g32710
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma16g32710
Paralog Evidence Comments
Glyma09g27720 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma16g32710 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.16g202200 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma16g32710
Coding sequences of Glyma16g32710
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma16g32710.1 sequence type=CDS gene model=Glyma16g32710 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGATGGAGTTGTTTACAAACCATAAACCAATAGCATCCATGGCTTCCTACAAGATTCTCTTCCTCTTCCTCTTTGTTAGCTTCCTCAATTTTGCAACTACTGACGCACAGGATGAAAGATCCACCGCTCTCTTTCTATCCCTTTACTGCTACGATGGCAACACTACCGCTAACAGTGCCTTCCAATTTAACGTCAGGAGCCTCCTCTCTTCCTTGTCATCAAACGCCCCCGGCGACAACGGATTCTACAACACCACAGTCCCTGCACTAAACCCCTCTGTCTTCGGACTCTTCATGTGCAGGGGTGACGTTCCTCCTCAGCTTTGTCAACATTGCGTCCAAAATGCAACCCAGCAACTAAGCTCACTGTGCTCACTGTCCATTGAAGCTGTGATTTGGTACGATGAGTGCACGGTTCGTTATTCCAACCGCTCCTTCTTCTCCACCGTGGACACTAGGCCTGCACTTGCCTTCACGAATGCTACAAATATCTCAAACCAGGAAAGTTTCATGCGTTCAATGTTTTCTGTAATGAACATAACTGCAGATGAAGCTGCTAAGGATGACAAGAAGTTTGCCACAAGGCAAACAACCATATCTGAATTTCAGAGCCTTTATTGTCTTGCTCAGTGCACTCCAGATTTGTCACCCCTTGATTGCAGAAGCTGTCTCAGTAAAGTTATAGGAGACCTTTCATGGTGCTGTGAAGGAAAGCAGGGAGCGAGTGTTCTATACCCCAGTTGTAATGTTAGGTATGAATTGTACCCTTTCTACCGCTCCACAAATACAACTATACCACCAGCGTGGGTTCCTGCAACAAATTTTCCCGATGCAGATTCACAAATTTCAGAAGATCCAACTTATCTAAACCACAGTTGCCCAACCAATGTAACTGCTTACAGCACTTTCCAAATTTATCTCAGTAACCTTCTCTCTTACTTAGCTTCCAATGCCACAAATGGGAAGAAATATTACAAGGACAACGTAGAAACTGTGTATGGCCTCTTCATGTGCCGAGGCGATCTTCCCTCTCAACTCTGCCAACAATGCGTCCTGAACGCAACCCACCGAATATCCTCAGTTTGCAATTCACTTCAAGAGGGAATCATTTGGTACAGCCACTGCATGCTTCGATATTCCAATCGGAATTTCTTCTCAGAAGTGGAAGAAAGTCCAAATTTTGACATGCTGAATCTTACCAGTTCCTCCACCAGCATCATCCCCGGGCAAGACTACTTCACTTTTACATTATCAGATACCATAGTTAAGCTGGCGAAAGACGCAGGGGATGCCACTGACAAATACGTTACCAAATCATTAAAATTGACTGATTCGCAAACTCTGTATACTCTTGTTCAATGCACGCAGGATTTGTCTAGTAAGGGTTGTCAGAACTGTCTGAAAGATATAAATGAAAAAATTCCATGGTTCCGCTTGGGAAGCGTAGGGGGAAGAGTTCTATATCCGAGCTGCAATCTCAGGTTTGAATTGTTCCCATTTTACGGGGGTAGAGGTGAAGAAACTCCGTCGCCAATACCGGGTAGTGGTGAAGAAACTCCATCGCCAATGGCGGGTAATCCTTCTACACCAGGCCTTCAAGAAAAAAGAAAAGTCCGATTGCGAACAAAAATTTTCATTATTGTACCCACAATTGTTTCTGTGACGCTCTTCTTTCTTGGCTATTATTTGGTAAAGAGAAAAGCAAGAAAGAGTGTTAAGACTATTCTTAGAGAAAATTTTGGTCCTGAAGGTGTCACTTTAGAGCCATTGCAATTTAGTTTGGCTGCAATTGAAGCAGCAACCAGCAACTTTTCAAATGATAATAGGATCGGCAAAGGCGGGTTTGGAGAAGTTTACAAGGGCATTCTTTTTGATGGACGACAAATAGCTGTAAAAAGACTCTCAAAAAGTTCTAAGCAAGGCGCAAATGAGTTTAAGAATGAGGTTTTATTAATAGCCAAACTTCAACACAGAAATCTTGTGACATTCATCGGATTTTGTCTTGAAGAACTTGAAAAAATACTTATCTACGAATATGTGCCAAACAAGAGTCTTGATTATTTTTTATTTGATCCTCAACGAGCAAAGATGTTAAGTTGGTTTGAACGCTATAACATTATAGGAGGAATTGCCCGAGGAACTTATTACTTGCATGAATTATCTCGACTCAAAATCATACACCGTGATCTCAAACCTAGTAATGTTTTATTAGATGAAAATATGATTCCAAAAATTTCAGATTTTGGTTTGGCTAGAATTGTTGAAATAAATCAAGACCAAGGAAGTACAAATAGAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGCTTGGACAATTTTCAGAAAAATCAGATGTTTTTAGTTTTGGAGTGATGGTTCTAGAGATTATTTCAGGAAAAAAGAATTTAGGCTTATATGAACCACATCGTGTTGCTGATGGCCTCTTGAGTTGTGTTTGGAGACAATGGAGGGATCAAACACCCTTAAGCATACTAGACGCAAGTATTAATGAAAATTATTCTGAAATTGAAGTTATTAAATGCATTCAAATTGGTTTATTATGTGTTCAACAAAATCCTGATGACAGACCCACAATGGTTGCAATTCTTTCTTATCTTAGTAGTCATTTAATTGAATTGCCACGTCCTCAAGAACCTGCCCTTTTCTTACATGGTAGAAAGGATCCTAAAGCATTTGCACAAGAATCAAGTTCAAGTCACAATATCAATGCTTCCACTTTATTCTCTATTAATGAAATGTCTATAAGTCAATTTCTTCCTCGATAG
Predicted protein sequences of Glyma16g32710
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma16g32710.1 sequence type=predicted peptide gene model=Glyma16g32710 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MMELFTNHKPIASMASYKILFLFLFVSFLNFATTDAQDERSTALFLSLYCYDGNTTANSAFQFNVRSLLSSLSSNAPGDNGFYNTTVPALNPSVFGLFMCRGDVPPQLCQHCVQNATQQLSSLCSLSIEAVIWYDECTVRYSNRSFFSTVDTRPALAFTNATNISNQESFMRSMFSVMNITADEAAKDDKKFATRQTTISEFQSLYCLAQCTPDLSPLDCRSCLSKVIGDLSWCCEGKQGASVLYPSCNVRYELYPFYRSTNTTIPPAWVPATNFPDADSQISEDPTYLNHSCPTNVTAYSTFQIYLSNLLSYLASNATNGKKYYKDNVETVYGLFMCRGDLPSQLCQQCVLNATHRISSVCNSLQEGIIWYSHCMLRYSNRNFFSEVEESPNFDMLNLTSSSTSIIPGQDYFTFTLSDTIVKLAKDAGDATDKYVTKSLKLTDSQTLYTLVQCTQDLSSKGCQNCLKDINEKIPWFRLGSVGGRVLYPSCNLRFELFPFYGGRGEETPSPIPGSGEETPSPMAGNPSTPGLQEKRKVRLRTKIFIIVPTIVSVTLFFLGYYLVKRKARKSVKTILRENFGPEGVTLEPLQFSLAAIEAATSNFSNDNRIGKGGFGEVYKGILFDGRQIAVKRLSKSSKQGANEFKNEVLLIAKLQHRNLVTFIGFCLEELEKILIYEYVPNKSLDYFLFDPQRAKMLSWFERYNIIGGIARGTYYLHELSRLKIIHRDLKPSNVLLDENMIPKISDFGLARIVEINQDQGSTNRIVGTYGYMSPEYAMLGQFSEKSDVFSFGVMVLEIISGKKNLGLYEPHRVADGLLSCVWRQWRDQTPLSILDASINENYSEIEVIKCIQIGLLCVQQNPDDRPTMVAILSYLSSHLIELPRPQEPALFLHGRKDPKAFAQESSSSHNINASTLFSINEMSISQFLPR*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
