Report for Sequence Feature Glyma16g31210
Feature Type: gene_model
Chromosome: Gm16
Start: 34645941
stop: 34648739
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma16g31210
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G34930 AT
Annotation by Michelle Graham. TAIR10: disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905
SoyBase E_val: 6.00E-110 ISS
GO:0006952 GO-bp
Annotation by Michelle Graham. GO Biological Process: defense response
SoyBase N/A ISS
GO:0007165 GO-bp
Annotation by Michelle Graham. GO Biological Process: signal transduction
SoyBase N/A ISS
GO:0050832 GO-bp
Annotation by Michelle Graham. GO Biological Process: defense response to fungus
SoyBase N/A ISS
GO:0005618 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cell wall
SoyBase N/A ISS
KOG0472
KOG
Leucine-rich repeat protein
JGI ISS
PTHR24420 Panther
FAMILY NOT NAMED
JGI ISS
PF00560 PFAM
Leucine Rich Repeat
JGI ISS
PF08263 PFAM
Leucine rich repeat N-terminal domain
JGI ISS
UniRef100_C6ZS04 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Leucine-rich repeat protein n=1 Tax=Glycine max RepID=C6ZS04_SOYBN
SoyBase E_val: 0 ISS
UniRef100_UPI000233E7B8 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233E7B8 related cluster n=1 Tax=unknown RepID=UPI000233E7B8
SoyBase E_val: 0 ISS
Expression Patterns of Glyma16g31210
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma16g31210 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.16g188700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma16g31210
Coding sequences of Glyma16g31210
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma16g31210.2 sequence type=CDS gene model=Glyma16g31210 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCAGTGCTATTTGCAACTCATGTTCTTCTCTTGATATTGTCCACTGCAACAACTCTCCACTTCAGTGCAAGCAAGGCAGCAAGGCTCAATATGACTTGCAGTGAGAAGGAAAGAAATGCACTCCTCAGCTTCAAGCATGGACTAGCAGACCCTTCAAACAGGCTTTCATCGTGGTCTGACAAATCTGATTGCTGCACATGGCCAGGGATTCACTGCAACAACACTGGTCAAGTCATGGAAATCAATCTTGACACACCTGTGGGCTCTCCCTATAGGGAGTTGAGTGGAGAGATTAGTCCTTCTTTGCTTGAACTAAAATATTTGAATCGGTTGAACTTGAGTTCAAATTATTTTGTTCTTACTCCAATACCAAGCTTCCTAGGCTCAATGGAGAGTCTGAGATACTTGGACCTTAGCTTAAACCTTCATAAACAAGGTAACTGGCTTCAAGAACTGAGTTCACTTCCATCTCTTTCAGAATTACACTTGGAGAGCTGTCAAATTAATTACTTAGGACCACCAAAAGGAAAATCCAACTTCACACATCTCCAAGTCCTTGATCTTTCAAATAACAATCTCAATCAGCAAATCCCTTTATGGCTATTTAATCTCAGCACAACCCTTGTCCAACTTAATTTACACAGTAACCTTTTACAGGGAGAAATTCCACAAATAATATCAAGCCTTCAGAACATAAAAAATCTAGACCTGCATAACAACCAACTCAGTGGGCCACTTCCAGATTCATTAGGCCAACTTAAGCATCTTCAAGTTCTAGATCTAAGTAATAATACCTTTACATGTCCAATTCCCTCACCATTTGCAAACTTGTCATCCTTGAGAACTTTAAACCTGGCTCACAACCGACTGAATGGAACCATTCCTAAGAGTTTTGAGTTCCTCAAAAACCTGCAGGTATTAAATCTTGGAGCTAATTCTTTGACTGGTGATATGCCTGTAACTCTTGGAACTCTCTCAAATTTAGTGATGTTAGACCTTTCATCTAATTTGTTAGAAGGATCTATAAAAGAGTCAAATTTTGTAAAACTTTTGAAATTAAAGGAACTACGTTTGTCTTGGACAAACTTGTTCCTCAGTGTCAACTCTGGATGGGTTCCTCCTTTTCAGCTTGAATATGTTTTACTGAGCTCCTTTGGAATAGGTCCTATGTTTCCAGAATGGCTAAAAAGGCAAAGTTCTGTAAAGGTTTTGACAATGTCTAAGGCAGGTATTGCAGACTTGGTTCCAAGTTGGTTTTGGAATTGGACTTTGCAAATTGAATTCCTGGATCTGTCAAACAATCTGTTAAGTGGAGACCTATCTAACATCTTTCTAAATTCCAGCGTCATAAATTTGAGTTCTAATTTGTTCAAGGGTAGATTGCCAAGTGTGTCTGCAAATGTTGAAGTGCTGAATGTTGCCAATAACTCAATTTCCGGAACAATTTCTCCCTTTTTATGTGGAAAGGAAAATGCTACTAATAAGTTAAGTGTGCTTGATTTTTCAAATAATGTCTTGTCTGGTGAGCTTGGTCACTGTTGGGTGCATTGGCAGGCTTTGGTGCATTTGAACTTGGGTAGTAACAATTTGTCTGGTGAAATTCCAAACTCCATGGGGTATCTGTCTCAACTTGAGTCTTTGTTATCCAACAATTTCAATGGCAGCATTACTGAAAAGATGTGTCAACTTTCTTCCCTTATAGTGCTGGATCTTGGCAATAATAGCCTGTCAGGATCCATTCCAAATTGTTTGGATGACATGAAGACAATGGCTGGTGAAGATGACTTCTTTGCCAACCCTTTAAGTTATTCATATGGCTCTGACTTCAGTTATAATCACTACAAGGAAACTCTTGTCTTAGTTCCCAAAGGAGATGAGTTAGAGTACAGAGACAATCTGATATTGGTGAGAATGATTGATCTTTCAAGTAATAAGCTGTCTGGAGCAATTCCATCTGAAATTTCCAAGCTATCTGCTTTGCGGTTTTTGAACTTGTCTAGAAATCATCTGTCTGGAGAGATACCAAATGACATGGGAAAAATGAAATTGTTAGAATCCCTTGATCTCTCACTAAACAACATTTCAGGTCAAATCCCTCAAAGCTTATCTGATTTGTCCTTCCTCAGTTTCCTGAATCTATCATACAACAACTTATCAGGCAGAATTCCCACGAGCACCCAACTTCAGAGCTTTGAAGAACTTAGCTACACTGGAAATCCTGAGCTTTCTGGTCCTCCTGTAACAAAAAATTGCACAGACAAGGAAGAGTTGACAGAGAGTGCTTCTGTTGGACACGGTGATGATAATTTCTTTGGAACATCAGAGTTTTATATTGGTATGGGAGTTGGATTTGCAGCAGGATTTTGGGGTTTTTGCAGTGTTGTTTTCTTCAACAGAACTTGGAGGCGTTCTTATTTTCATTATCTTGACCACTTGAGAGATCTGATTTATGTGATAATAGTTTTGAAGGTAAGAAGGTTACTTGGGAAATTATGA
Predicted protein sequences of Glyma16g31210
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma16g31210.2 sequence type=predicted peptide gene model=Glyma16g31210 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAVLFATHVLLLILSTATTLHFSASKAARLNMTCSEKERNALLSFKHGLADPSNRLSSWSDKSDCCTWPGIHCNNTGQVMEINLDTPVGSPYRELSGEISPSLLELKYLNRLNLSSNYFVLTPIPSFLGSMESLRYLDLSLNLHKQGNWLQELSSLPSLSELHLESCQINYLGPPKGKSNFTHLQVLDLSNNNLNQQIPLWLFNLSTTLVQLNLHSNLLQGEIPQIISSLQNIKNLDLHNNQLSGPLPDSLGQLKHLQVLDLSNNTFTCPIPSPFANLSSLRTLNLAHNRLNGTIPKSFEFLKNLQVLNLGANSLTGDMPVTLGTLSNLVMLDLSSNLLEGSIKESNFVKLLKLKELRLSWTNLFLSVNSGWVPPFQLEYVLLSSFGIGPMFPEWLKRQSSVKVLTMSKAGIADLVPSWFWNWTLQIEFLDLSNNLLSGDLSNIFLNSSVINLSSNLFKGRLPSVSANVEVLNVANNSISGTISPFLCGKENATNKLSVLDFSNNVLSGELGHCWVHWQALVHLNLGSNNLSGEIPNSMGYLSQLESLLSNNFNGSITEKMCQLSSLIVLDLGNNSLSGSIPNCLDDMKTMAGEDDFFANPLSYSYGSDFSYNHYKETLVLVPKGDELEYRDNLILVRMIDLSSNKLSGAIPSEISKLSALRFLNLSRNHLSGEIPNDMGKMKLLESLDLSLNNISGQIPQSLSDLSFLSFLNLSYNNLSGRIPTSTQLQSFEELSYTGNPELSGPPVTKNCTDKEELTESASVGHGDDNFFGTSEFYIGMGVGFAAGFWGFCSVVFFNRTWRRSYFHYLDHLRDLIYVIIVLKVRRLLGKL*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
