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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G22710 | AT | Annotation by Michelle Graham. TAIR10: sucrose-proton symporter 2 | chr1:8030911-8032970 REVERSE LENGTH=512 | SoyBase | E_val: 0 | ISS |
| GO:0009915 | GO-bp | Annotation by Michelle Graham. GO Biological Process: phloem sucrose loading | SoyBase | N/A | ISS |
| GO:0015770 | GO-bp | Annotation by Michelle Graham. GO Biological Process: sucrose transport | SoyBase | N/A | ISS |
| GO:0055085 | GO-bp | Annotation by Michelle Graham. GO Biological Process: transmembrane transport | SoyBase | N/A | ISS |
| GO:0005886 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane | SoyBase | N/A | ISS |
| GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
| GO:0005351 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: sugar:hydrogen symporter activity | SoyBase | N/A | ISS |
| GO:0008506 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: sucrose:hydrogen symporter activity | SoyBase | N/A | ISS |
| GO:0008515 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: sucrose transmembrane transporter activity | SoyBase | N/A | ISS |
| GO:0015144 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: carbohydrate transmembrane transporter activity | SoyBase | N/A | ISS |
| KOG0637 | KOG | Sucrose transporter and related proteins | JGI | ISS | |
| PTHR19432 | Panther | SUCROSE TRANSPORT PROTEIN | JGI | ISS | |
| PTHR19432:SF2 | Panther | PROSTEIN PROTEIN | JGI | ISS | |
| UniRef100_A3DSX3 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Sucrose transport protein SUT1 n=1 Tax=Phaseolus vulgaris RepID=A3DSX3_PHAVU | SoyBase | E_val: 0 | ISS |
| UniRef100_I1MNY8 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MNY8_SOYBN | SoyBase | E_val: 0 | ISS |
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Glyma16g27330 not represented in the dataset |
Glyma16g27330 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.16g156900 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma16g27330.1 sequence type=CDS gene model=Glyma16g27330 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGAGGAGCCACAACCAGGACCCAGCCCGTTACGCAAAATGATTTTGGTGTCATCAATGGCGGCCGGTATCCAATTCGGGTGGGCCCTACAGCTCTCCCTTCTCACCCCATATGTTCAAACCCTAGGCGTCCCGCACGCTTGGGCCTCATTTATTTGGCTATGTGGCCCGATATCTGGGCTGCTGGTGCAGCCCATTGTGGGCTACAGCAGCGACCGATGCCAATCCCGTTTCGGTCGTCGCCGTCCCTTTATCCTAGCCGGGTCTTTGGCCGTCGCCATTGCCGTGTTCCTAATTGGTTACGCGGCCGATATAGGACACGCGGCAGGCGACAACCTGACCCAAAAGACTCGGCCACGTGCAGTGGCGATCTTCGTGATCGGGTTTTGGATCCTCGACGTGGCTAACAACATGCTCCAGGGTCCATGCCGTGCCTTTCTGGGCGACCTCGCTGCCGGGGATGAGAAAAAGACAAAGGCAGCCAACGCCTTCTTCTCTTTCTTCATGGCCGTCGGCAACATCCTGGGCTATGCTGCGGGATCCTACGACGGCCTCCACCGCCTCTTCCCCTTCACGGAAACCGAGGCATGCAACGTCTTCTGCGCAAACCTCAAGAGTTGCTTCTTCTTCGCTATCGTCCTCCTGGTGGTCCTCACCACCTTGGTGCTGATTACCGTGAAAGAAACTCCCTACACGCCAAAGGCAGAGAAGGAAACCAAAGATGCAGAGAAGACACACTTCTCGTGCTTCTGCGGAGAACTTTGTCTTGCATTCAAGGGGCTGAAGAGGCCAATGTGGATGTTGATGTTGGTGACCGCCGTGAACTGGATCGCGTGGTTCCCTTACTTTTTGTTCGACACCGATTGGATGGGTCGTGAGGTGTATGGTGGTGACGTGGGGCAGAAGGCGTACGATTCGGGAGTTCATGCAGGTTCTCTAGGGCTAATGTTGAACGCGGTGGTGTTGGCTGTGATGTCATTGGCAATTGAACCGTTGGGGCGTGTGGTTGGGGGAATCAAGTGGTTGTGGGGAATCGTTAACATCTTGTTGGCTATATGCTTGGGAATGACCGTTCTCATCACAAAGATCGCTGAGCATGAACGTCTTCTTAACCCTGCTTTGGTTGGGAACCCTTCCCTCGGTATCAAAGTTGGCTCCATGGTTTTCTTCTCTGTCCTTGGAATCCCTCTTGCGATTACTTTCAGTGTCCCATTTGCTCTAGCATCTATATACTCCAGCACTTCCGGAGCAGGCCAAGGTCTATCTTTGGGTGTCCTTAATATTGCAATTGTCGTTCCACAGATGATAGTATCAACCATAAGTGGACCTTGGGATGCCTTGTTCGGCGGTGGAAACTTGCCTGCATTCGTGTTGGGTGCGGTGGCCGCTGTCGTGAGTGCAATATTAGCAGTTCTTCTGCTGCCAACTCCAAAGAAAGCTGATGAGGCCAGGGCTTCTAGCCTCAACATGGGAAGTTTGCATTAG
>Glyma16g27330.1 sequence type=predicted peptide gene model=Glyma16g27330 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MEEPQPGPSPLRKMILVSSMAAGIQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLLVQPIVGYSSDRCQSRFGRRRPFILAGSLAVAIAVFLIGYAADIGHAAGDNLTQKTRPRAVAIFVIGFWILDVANNMLQGPCRAFLGDLAAGDEKKTKAANAFFSFFMAVGNILGYAAGSYDGLHRLFPFTETEACNVFCANLKSCFFFAIVLLVVLTTLVLITVKETPYTPKAEKETKDAEKTHFSCFCGELCLAFKGLKRPMWMLMLVTAVNWIAWFPYFLFDTDWMGREVYGGDVGQKAYDSGVHAGSLGLMLNAVVLAVMSLAIEPLGRVVGGIKWLWGIVNILLAICLGMTVLITKIAEHERLLNPALVGNPSLGIKVGSMVFFSVLGIPLAITFSVPFALASIYSSTSGAGQGLSLGVLNIAIVVPQMIVSTISGPWDALFGGGNLPAFVLGAVAAVVSAILAVLLLPTPKKADEARASSLNMGSLH*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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