Glyma16g26170 - SoyBase

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Report for Sequence Feature Glyma16g26170

Feature Type:	gene_model
Chromosome:	Gm16
Start:	30337100
stop:	30340260
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma16g26170

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
UniRef100_I1MNN0	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MNN0_SOYBN	SoyBase	E_val: 4.00E-148	ISS

Expression Patterns of Glyma16g26170

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma16g26170 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.16g146200	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma16g26170

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma16g26170

Limit To All Plant Sequences

>Glyma16g26170.1   sequence type=CDS   gene model=Glyma16g26170   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTCAGAATCACATCCCTCAGGGTCTCGTACACGATCCCACGCGAGAGGTTGCCGAAGAGGCTCGCCGTAATGTTGTCCTCTGAAGAGGAGGAAAATGAAGATGAGTCTCCTCTTTGTCAAACATTAACTCGACTCTGCTCTCCGGGGAGCCACACGGAGGTGCATTCCTTCCTCGTGGGGATCTCGCGCTCTAGTGGCTCCTACTACATCTTCTGCACTTTATCCATGCTGAGATTCTCGTACCTTAGTAACTTGTGTATGCCATCTTCGAATGCGTGCCTTTGCAAAGTGCGTACCTACAATCATTTCTTTAGCTATTTTGCTCCATTTTGTAACCGTTTCCTCTTGCTGAATCGCACTTATGTCGTTGATGATCAAGTTCGTTTTTCCCTTGACCTTGTTTTCCTCTTGATCTTCCTCTTGATGAGACTGAGCCTACTCCGTGAAATAGTCGCAAGCTATGAAACACCGACACTGACACGGACACCAGACACGACACGGATATGGACACGTGAACACATGTTAAACACATCAAACTCAACCCAGACATGGACGTCAGTGTCGATGTCGGTGTCGTGTCAGACACCGAACACGGCAAGGGACTGGAGTGTCTGTGCTTCATAG

Predicted protein sequences of Glyma16g26170

Limit To All Plant Sequences

>Glyma16g26170.1   sequence type=predicted peptide   gene model=Glyma16g26170   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MFRITSLRVSYTIPRERLPKRLAVMLSSEEEENEDESPLCQTLTRLCSPGSHTEVHSFLVGISRSSGSYYIFCTLSMLRFSYLSNLCMPSSNACLCKVRTYNHFFSYFAPFCNRFLLLNRTYVVDDQVRFSLDLVFLLIFLLMRLSLLREIVASYETPTLTRTPDTTRIWTREHMLNTSNSTQTWTSVSMSVSCQTPNTARDWSVCAS*

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