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A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT4G19420 | AT | Annotation by Michelle Graham. TAIR10: Pectinacetylesterase family protein | chr4:10587504-10589807 REVERSE LENGTH=397 | SoyBase | E_val: 0 | ISS |
GO:0008150 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biological process | SoyBase | N/A | ISS |
GO:0005576 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: extracellular region | SoyBase | N/A | ISS |
KOG4287 | KOG | Pectin acetylesterase and similar proteins | JGI | ISS | |
PTHR21562 | Panther | NOTUM-RELATED | JGI | ISS | |
PTHR21562:SF1 | Panther | PECTIN ACETYLESTERASE | JGI | ISS | |
PF03283 | PFAM | Pectinacetylesterase | JGI | ISS | |
UniRef100_I1MMH5 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1MMH5_SOYBN | SoyBase | E_val: 0 | ISS |
UniRef100_Q41695 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Pectinacetylesterase n=1 Tax=Vigna radiata var. radiata RepID=Q41695_VIGRR | SoyBase | E_val: 0 | ISS |
Glyma16g17190 not represented in the dataset |
Glyma16g17190 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.16g107300 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma16g17190.5 sequence type=transcript gene model=Glyma16g17190 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high CAACCGGACTTGTTCTTTTCTATCACTGCCGTCCTTTATGTCTTTATCTTTTTCAGTCTATTCTTTCCCTCTCGCAATAAAGATTCACTGGTGTTACGCGTTAACATCCACTCTATTAAGCAAATGTGCTCCTAGTAGTACAATAAAAATATAAAATAAAATAAAAATAACAAATATTTATATAAGATTGTGTTCTTGCAAGTTCCAAGTTCCAAGTTCATGCACAACCGATCTTTTCCTCTGAGAAGACGTGTCGGTAGCTGAAGCATTTTATAAGCCTCCACTTTCCTGAACTAGTTTTAACATACAATCTTTCAAGTACACCTCCCCAGCTTCCATTTAAGTTTGTGGGGCTAGAAGTTTCTATTTCTGGGCATTCAGAAGATTGCAGGAAAAGTTATCAGCTTTATTTCCATATTGAACAGAGTTGTTGATCTAGAATGGAGATCACTAGAATAGGCCAATGGTTAAGTCTTCTGATATGTGTACTACTATTACTGCAGACAGAAGGGGTTCCTGTGGGAATCACTTTTGTTGAAAATGCAGTGGCAAAAGGGGCTGTTTGTTTGGATGGGAGTCCTCCAGCTTACCACTTCCACAAGGGATCTGGAGCAGGGATTAACAACTGGATAGTTCACTTTGAGGGAGGAGGATGGTGCAACAACGTTACTACTTGCCTTTCCCGTAGGGACACTCGATTAGGTTCATCTAAGAAAATGGATACATCACTTTCCTTTTCTGGGTTTTTCAGTAACAGTAAAAAGTTCAATCCAGATTTCTATGATTGGAACAGAATCAAGGTTAGGTATTGTGATGGGTCATCATTTACTGGTGATGTTGAAGCTGTTGATCCGAAAACCAATTTGCACTTCAGAGGAGCAAGGGTTTTTGCTGTGGTCGTTGAGGATTTATTAGCAAAAGGAATGAAAAATGCTCAAAATGCAATTATCTCCGGATGTTCAGCTGGAGGATTGGCTTCTATTCTAAATTGCGATCGATTCAAATCACTACTACCTGCAACAACTAAAGTGAAATGCCTTGCAGATGCTGGTTTTTTTATCAATGTAAAGGATGTCTCTGGAGCACAGCGCATTGAAGAGTTCTACAGTCAAGTTGTTCAAACACATGGCTCAGCAAAGAATTTGCCTACATCCTGCACTTCAAGACTCAGACCAGGGCTGTGCTTTTTCCCTCAAAATGTCGTGTCCCAAATCAGTACCCCAATCTTCTTTGTAAATGCAGCCTATGACTCATGGCAGATCAAAAACATTTTGGCACCAGGTGCTGCTGATCCCCGTGGCCAATGGCGTGAATGCAAGCTTGATATCAAAAACTGCTCACCTAATCAACTCAGTGTAATGCAAGGATTCAGGACAGATTTCTTAAGGGCATTTAGTGTGGTTGGCAACGCCGCATCTAAAGGGCATTTTATAGATGGTTGCTATGCACACTGCCAAACTGGAATACAAGAGACATGGCTGAGAAATGACTCCCCAGTGGTGGCCAAGACATCAATTGCAAAGGCAGTGGGTGATTGGTTTTATGATCGAAGGCCCTTCCGTGAGATAGATTGTGCCTACCCTTGCAACCCTACTTGCCATAATCGTATTTTTGATCAGAATGAGCGTCCAGACGTATAGATTCATTTAAAAGAGTATGCTTATTTATTTATTACTACAAACTATACTTTATTAGTTATCTAGTTTTTATTGAACGAGATGTGTCACTTGCACTCATGGCTTTGTGGTTTGAGATCTCAAACCATCAAAGTATGGGTTCGATTGTTGCATCAACAAAAAACAAGCTGTGATTGATGATTTAAAAGGTTCCAAAGTGTAAGGGTAGGCAACCTGATAAAGGATGATAATTGTCTACCATGTAAACATAACATTTTTATTATCAATAAAGGGTATATCTGTAATTCTAATAACTTTTTTTTTATCTATAATTTTTGGACGAAAATAGTCTTGTAGGCCGAAGAACTAGTTTAACTAGCATTTTTTTCCTTGTCTTTTTTACCGAGCAATAAACAGTATTTTTTCTTATATAAATATTATAACTTGGTTTCAAATTTTTAAGTCAAGTTTGAGTACGAGAAATGTTTGGAATCTGTCTTAGTTTGGAATTTGAAAGAAGTGTTTGGTGCAAAATCTACTATTACCCTCAAAAACCAATTACATAGCATTTTAGAAACATCATCAACAACAACAACAACAACGCCTTATCCCACTAGATGGGGTCGGCTACATGGATCAATTTCCGTCATAATGTTCTATCAAGTACCATACTTCTATCCAAATCATTAAGTTCGAGATCCTTCTTGATAACCTCTCTTATAGTCTTTTTGAGTCTTCCTCTGCCTCGAATTGTTTGCCTTCTCTCCATCTGGTCTACTCTCCTCACTACAGAGTCTACCGGTCTTTTCTCTACATGCCCAAACCACCTAAGTCTATTT >Glyma16g17190.6 sequence type=transcript gene model=Glyma16g17190 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high CAACCGGACTTGTTCTTTTCTATCACTGCCGTCCTTTATGTCTTTATCTTTTTCAGTCTATTCTTTCCCTCTCGCAATAAAGATTCACTGGTGTTACGCGTTAACATCCACTCTATTAAGCAAATGTGCTCCTAGTAGTACAATAAAAATATAAAATAAAATAAAAATAACAAATATTTATATAAGATTGTGTTCTTGCAAGTTCCAAGTTCCAAGTTCATGCACAACCGATCTTTTCCTCTGAGAAGACGTGTCGGTAGCTGAAGCATTTTATAAGCCTCCACTTTCCTGAACTAGTTTTAACATACAATCTTTCAAGTACACCTCCCCAGCTTCCATTTAAGAATGGAGATCACTAGAATAGGCCAATGGTTAAGTCTTCTGATATGTGTACTACTATTACTGCAGACAGAAGGGGTTCCTGTGGGAATCACTTTTGTTGAAAATGCAGTGGCAAAAGGGGCTGTTTGTTTGGATGGGAGTCCTCCAGCTTACCACTTCCACAAGGGATCTGGAGCAGGGATTAACAACTGGATAGTTCACTTTGAGGGAGGAGGATGGTGCAACAACGTTACTACTTGCCTTTCCCGTAGGGACACTCGATTAGGTTCATCTAAGAAAATGGATACATCACTTTCCTTTTCTGGGTTTTTCAGTAACAGTAAAAAGTTCAATCCAGATTTCTATGATTGGAACAGAATCAAGGTTAGGTATTGTGATGGGTCATCATTTACTGGTGATGTTGAAGCTGTTGATCCGAAAACCAATTTGCACTTCAGAGGAGCAAGGGTTTTTGCTGTGGTCGTTGAGGATTTATTAGCAAAAGGAATGAAAAATGCTCAAAATGCAATTATCTCCGGATGTTCAGCTGGAGGATTGGCTTCTATTCTAAATTGCGATCGATTCAAATCACTACTACCTGCAACAACTAAAGTGAAATGCCTTGCAGATGCTGGTTTTTTTATCAATGTAAAGGATGTCTCTGGAGCACAGCGCATTGAAGAGTTCTACAGTCAAGTTGTTCAAACACATGGCTCAGCAAAGAATTTGCCTACATCCTGCACTTCAAGACTCAGACCAGGGCTGTGCTTTTTCCCTCAAAATGTCGTGTCCCAAATCAGTACCCCAATCTTCTTTGTAAATGCAGCCTATGACTCATGGCAGATCAAAAACATTTTGGCACCAGGTGCTGCTGATCCCCGTGGCCAATGGCGTGAATGCAAGCTTGATATCAAAAACTGCTCACCTAATCAACTCAGTGTAATGCAAGGATTCAGGACAGATTTCTTAAGGGCATTTAGTGTGGTTGGCAACGCCGCATCTAAAGGGCATTTTATAGATGGTTGCTATGCACACTGCCAAACTGGAATACAAGAGACATGGCTGAGAAATGACTCCCCAGTGGTGGCCAAGACATCAATTGCAAAGGCAGTGGGTGATTGGTTTTATGATCGAAGGCCCTTCCGTGAGATAGATTGTGCCTACCCTTGCAACCCTACTTGCCATAATCGTATTTTTGATCAGAATGAGCGTCCAGACGTATAGATTCATTTAAAAGAGTATGCTTATTTATTTATTACTACAAACTATACTTTATTAGTTATCTAGTTTTTATTGAACGAGATGTGTCACTTGCACTCATGGCTTTGTGGTTTGAGATCTCAAACCATCAAAGTATGGGTTCGATTGTTGCATCAACAAAAAACAAGCTGTGATTGATGATTTAAAAGGTTCCAAAGTGTAAGGGTAGGCAACCTGATAAAGGATGATAATTGTCTACCATGTAAACATAACATTTTTATTATCAATAAAGGGTATATCTGTAATTCTAATAACTTTTTTTTTATCTATAATTTTTGGACGAAAATAGTCTTGTAGGCCGAAGAACTAGTTTAACTAGCATTTTTTTCCTTGTCTTTTTTACCGAGCAATAAACAGTATTTTTTCTTATATAAATATTATAACTTGGTTTCAAATTTTTAAGTCAAGTTTGAGTACGAGAAATGTTTGGAATCTGTCTTAGTTTGGAATTTGAAAGAAGTGTTTGGTGCAAAATCTACTATTACCCTCAAAAACCAATTACATAGCATTTTAGAAACATCATCAACAACAACAACAACAACGCCTTATCCCACTAGATGGGGTCGGCTACATGGATCAATTTCCGTCATAATGTTCTATCAAGTACCATACTTCTATCCAAATCATTAAGTTCGAGATCCTTCTTGATAACCTCTCTTATAGTCTTTTTGAGTCTTCCTCTGCCTCGAATTGTTTGCCTTCTCTCCATCTGGTCTACTCTCCTCACTACAGAGTCTACCGGTCTTTTCTCTACATGCCCAAACCACCTAAGTCTATTT
>Glyma16g17190.1 sequence type=CDS gene model=Glyma16g17190 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGACAAGATTAGAAGACAATATAAAATTTTCCTTGTTCTATGTAATGGAGATCACTAGAATAGGCCAATGGTTAAGTCTTCTGATATGTGTACTACTATTACTGCAGACAGAAGGGGTTCCTGTGGGAATCACTTTTGTTGAAAATGCAGTGGCAAAAGGGGCTGTTTGTTTGGATGGGAGTCCTCCAGCTTACCACTTCCACAAGGGATCTGGAGCAGGGATTAACAACTGGATAGTTCACTTTGAGGGAGGAGGATGGTGCAACAACGTTACTACTTGCCTTTCCCGTAGGGACACTCGATTAGGTTCATCTAAGAAAATGGATACATCACTTTCCTTTTCTGGGTTTTTCAGTAACAGTAAAAAGTTCAATCCAGATTTCTATGATTGGAACAGAATCAAGGTTAGGTATTGTGATGGGTCATCATTTACTGGTGATGTTGAAGCTGTTGATCCGAAAACCAATTTGCACTTCAGAGGAGCAAGGGTTTTTGCTGTGGTCGTTGAGGATTTATTAGCAAAAGGAATGAAAAATGCTCAAAATGCAATTATCTCCGGATGTTCAGCTGGAGGATTGGCTTCTATTCTAAATTGCGATCGATTCAAATCACTACTACCTGCAACAACTAAAGTGAAATGCCTTGCAGATGCTGGTTTTTTTATCAATGTAAAGGATGTCTCTGGAGCACAGCGCATTGAAGAGTTCTACAGTCAAGTTGTTCAAACACATGGCTCAGCAAAGAATTTGCCTACATCCTGCACTTCAAGACTCAGACCAGGGCTGTGCTTTTTCCCTCAAAATGTCGTGTCCCAAATCAGTACCCCAATCTTCTTTGTAAATGCAGCCTATGACTCATGGCAGATCAAAAACATTTTGGCACCAGGTGCTGCTGATCCCCGTGGCCAATGGCGTGAATGCAAGCTTGATATCAAAAACTGCTCACCTAATCAACTCAGTGTAATGCAAGGATTCAGGACAGATTTCTTAAGGGCATTTAGTGTGGTTGGCAACGCCGCATCTAAAGGGCATTTTATAGATGGTTGCTATGCACACTGCCAAACTGGAATACAAGAGACATGGCTGAGAAATGACTCCCCAGTGGTGGCCAAGACATCAATTGCAAAGGCAGTGGGTGATTGGTTTTATGATCGAAGGCCCTTCCGTGAGATAGATTGTGCCTACCCTTGCAACCCTACTTGCCATAATCGTATTTTTGATCAGAATGAGCGTCCAGACGTATAG >Glyma16g17190.5 sequence type=CDS gene model=Glyma16g17190 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGAGATCACTAGAATAGGCCAATGGTTAAGTCTTCTGATATGTGTACTACTATTACTGCAGACAGAAGGGGTTCCTGTGGGAATCACTTTTGTTGAAAATGCAGTGGCAAAAGGGGCTGTTTGTTTGGATGGGAGTCCTCCAGCTTACCACTTCCACAAGGGATCTGGAGCAGGGATTAACAACTGGATAGTTCACTTTGAGGGAGGAGGATGGTGCAACAACGTTACTACTTGCCTTTCCCGTAGGGACACTCGATTAGGTTCATCTAAGAAAATGGATACATCACTTTCCTTTTCTGGGTTTTTCAGTAACAGTAAAAAGTTCAATCCAGATTTCTATGATTGGAACAGAATCAAGGTTAGGTATTGTGATGGGTCATCATTTACTGGTGATGTTGAAGCTGTTGATCCGAAAACCAATTTGCACTTCAGAGGAGCAAGGGTTTTTGCTGTGGTCGTTGAGGATTTATTAGCAAAAGGAATGAAAAATGCTCAAAATGCAATTATCTCCGGATGTTCAGCTGGAGGATTGGCTTCTATTCTAAATTGCGATCGATTCAAATCACTACTACCTGCAACAACTAAAGTGAAATGCCTTGCAGATGCTGGTTTTTTTATCAATGTAAAGGATGTCTCTGGAGCACAGCGCATTGAAGAGTTCTACAGTCAAGTTGTTCAAACACATGGCTCAGCAAAGAATTTGCCTACATCCTGCACTTCAAGACTCAGACCAGGGCTGTGCTTTTTCCCTCAAAATGTCGTGTCCCAAATCAGTACCCCAATCTTCTTTGTAAATGCAGCCTATGACTCATGGCAGATCAAAAACATTTTGGCACCAGGTGCTGCTGATCCCCGTGGCCAATGGCGTGAATGCAAGCTTGATATCAAAAACTGCTCACCTAATCAACTCAGTGTAATGCAAGGATTCAGGACAGATTTCTTAAGGGCATTTAGTGTGGTTGGCAACGCCGCATCTAAAGGGCATTTTATAGATGGTTGCTATGCACACTGCCAAACTGGAATACAAGAGACATGGCTGAGAAATGACTCCCCAGTGGTGGCCAAGACATCAATTGCAAAGGCAGTGGGTGATTGGTTTTATGATCGAAGGCCCTTCCGTGAGATAGATTGTGCCTACCCTTGCAACCCTACTTGCCATAATCGTATTTTTGATCAGAATGAGCGTCCAGACGTATAG >Glyma16g17190.6 sequence type=CDS gene model=Glyma16g17190 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGAGATCACTAGAATAGGCCAATGGTTAAGTCTTCTGATATGTGTACTACTATTACTGCAGACAGAAGGGGTTCCTGTGGGAATCACTTTTGTTGAAAATGCAGTGGCAAAAGGGGCTGTTTGTTTGGATGGGAGTCCTCCAGCTTACCACTTCCACAAGGGATCTGGAGCAGGGATTAACAACTGGATAGTTCACTTTGAGGGAGGAGGATGGTGCAACAACGTTACTACTTGCCTTTCCCGTAGGGACACTCGATTAGGTTCATCTAAGAAAATGGATACATCACTTTCCTTTTCTGGGTTTTTCAGTAACAGTAAAAAGTTCAATCCAGATTTCTATGATTGGAACAGAATCAAGGTTAGGTATTGTGATGGGTCATCATTTACTGGTGATGTTGAAGCTGTTGATCCGAAAACCAATTTGCACTTCAGAGGAGCAAGGGTTTTTGCTGTGGTCGTTGAGGATTTATTAGCAAAAGGAATGAAAAATGCTCAAAATGCAATTATCTCCGGATGTTCAGCTGGAGGATTGGCTTCTATTCTAAATTGCGATCGATTCAAATCACTACTACCTGCAACAACTAAAGTGAAATGCCTTGCAGATGCTGGTTTTTTTATCAATGTAAAGGATGTCTCTGGAGCACAGCGCATTGAAGAGTTCTACAGTCAAGTTGTTCAAACACATGGCTCAGCAAAGAATTTGCCTACATCCTGCACTTCAAGACTCAGACCAGGGCTGTGCTTTTTCCCTCAAAATGTCGTGTCCCAAATCAGTACCCCAATCTTCTTTGTAAATGCAGCCTATGACTCATGGCAGATCAAAAACATTTTGGCACCAGGTGCTGCTGATCCCCGTGGCCAATGGCGTGAATGCAAGCTTGATATCAAAAACTGCTCACCTAATCAACTCAGTGTAATGCAAGGATTCAGGACAGATTTCTTAAGGGCATTTAGTGTGGTTGGCAACGCCGCATCTAAAGGGCATTTTATAGATGGTTGCTATGCACACTGCCAAACTGGAATACAAGAGACATGGCTGAGAAATGACTCCCCAGTGGTGGCCAAGACATCAATTGCAAAGGCAGTGGGTGATTGGTTTTATGATCGAAGGCCCTTCCGTGAGATAGATTGTGCCTACCCTTGCAACCCTACTTGCCATAATCGTATTTTTGATCAGAATGAGCGTCCAGACGTATAG
>Glyma16g17190.1 sequence type=predicted peptide gene model=Glyma16g17190 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MTRLEDNIKFSLFYVMEITRIGQWLSLLICVLLLLQTEGVPVGITFVENAVAKGAVCLDGSPPAYHFHKGSGAGINNWIVHFEGGGWCNNVTTCLSRRDTRLGSSKKMDTSLSFSGFFSNSKKFNPDFYDWNRIKVRYCDGSSFTGDVEAVDPKTNLHFRGARVFAVVVEDLLAKGMKNAQNAIISGCSAGGLASILNCDRFKSLLPATTKVKCLADAGFFINVKDVSGAQRIEEFYSQVVQTHGSAKNLPTSCTSRLRPGLCFFPQNVVSQISTPIFFVNAAYDSWQIKNILAPGAADPRGQWRECKLDIKNCSPNQLSVMQGFRTDFLRAFSVVGNAASKGHFIDGCYAHCQTGIQETWLRNDSPVVAKTSIAKAVGDWFYDRRPFREIDCAYPCNPTCHNRIFDQNERPDV* >Glyma16g17190.5 sequence type=predicted peptide gene model=Glyma16g17190 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MEITRIGQWLSLLICVLLLLQTEGVPVGITFVENAVAKGAVCLDGSPPAYHFHKGSGAGINNWIVHFEGGGWCNNVTTCLSRRDTRLGSSKKMDTSLSFSGFFSNSKKFNPDFYDWNRIKVRYCDGSSFTGDVEAVDPKTNLHFRGARVFAVVVEDLLAKGMKNAQNAIISGCSAGGLASILNCDRFKSLLPATTKVKCLADAGFFINVKDVSGAQRIEEFYSQVVQTHGSAKNLPTSCTSRLRPGLCFFPQNVVSQISTPIFFVNAAYDSWQIKNILAPGAADPRGQWRECKLDIKNCSPNQLSVMQGFRTDFLRAFSVVGNAASKGHFIDGCYAHCQTGIQETWLRNDSPVVAKTSIAKAVGDWFYDRRPFREIDCAYPCNPTCHNRIFDQNERPDV* >Glyma16g17190.6 sequence type=predicted peptide gene model=Glyma16g17190 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MEITRIGQWLSLLICVLLLLQTEGVPVGITFVENAVAKGAVCLDGSPPAYHFHKGSGAGINNWIVHFEGGGWCNNVTTCLSRRDTRLGSSKKMDTSLSFSGFFSNSKKFNPDFYDWNRIKVRYCDGSSFTGDVEAVDPKTNLHFRGARVFAVVVEDLLAKGMKNAQNAIISGCSAGGLASILNCDRFKSLLPATTKVKCLADAGFFINVKDVSGAQRIEEFYSQVVQTHGSAKNLPTSCTSRLRPGLCFFPQNVVSQISTPIFFVNAAYDSWQIKNILAPGAADPRGQWRECKLDIKNCSPNQLSVMQGFRTDFLRAFSVVGNAASKGHFIDGCYAHCQTGIQETWLRNDSPVVAKTSIAKAVGDWFYDRRPFREIDCAYPCNPTCHNRIFDQNERPDV*
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