Report for Sequence Feature Glyma16g14740
Feature Type: gene_model
Chromosome: Gm16
Start: 15660335
stop: 15663353
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma16g14740
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G20300 AT
Annotation by Michelle Graham. TAIR10: Protein of unknown function (DUF1639) | chr4:10955813-10958865 FORWARD LENGTH=352
SoyBase E_val: 5.00E-56 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0005739 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
PF07797 PFAM
Protein of unknown function (DUF1639)
JGI ISS
UniRef100_I1MME3 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MME3_SOYBN
SoyBase E_val: 1.00E-161 ISS
Expression Patterns of Glyma16g14740
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma16g14740 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.16g094400 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma16g14740
Coding sequences of Glyma16g14740
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma16g14740.1 sequence type=CDS gene model=Glyma16g14740 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTCCCCTTTTGATTCTCCCCAAACAACAGCAGATAGCAGCCTCAGCATGAGCACAAGCACCAGTCCAAGTGGTGGTGATGCGTTGTTGAAGTGGGGACACAGAAAGAGATCAAGGCTTTCCAGGGCTGCCATTGAAGATTCATCGTCTTCTGTTCACACCAACAACAGAAGAATCACCCACACTGTTCCTCCAAACTTGTCCATGCCGCCGCCGCCACTCGTTTCTTCTACTGCCTCCAGTGGCAGAGGTAGAAAGCATAATAGCCCTAGGAATTTGGAAGACCCCTCCTTAGGTGGAAGTGAGTCACCTTCAAGAAGCCAGGGGAGCAACCCAGTTGTGTCTAGATCTGCTGCAGCACCAAAACTGTCTTCTTGTGGCATGGAAAGAAGTAGCAGAAGGATGCTTTCTTCTGGATCAGCAAAGTGTCAAAAGCCAAGTGGATTTTCAACAACACAAGAAGCCTCTGAGAGACTGAACAATAGTAGTCATGCCTCGGTGCAGTCTGAAAAAGAAGGTGGTGTTGCCACTGCTCCTGCTACCTCATCCCTTGCTGCCAATGGAAACAAGGTCACTGTTGGGGTAATTCAGTGGCCAAAGATCTACATTGCTCTCTCAAGAAAGGAGAAAGAAGATGACTTTCTCGCTATGAAGGGGACAAAAATCCCTCAAAGACCAAAGAAGAGAGCAAAGAATGTTGACAGAATTCTACAGTGCTGTTTCCCTGGGATGTGGCTATCAGAACTGACAAAGAGCAGATATGAGGTTAGGGAGAAGAAGTCAGTGAAGAAGCAAAAGCGCAGCAGAGGCTTGAAAGGAATGGAAAACTTGGACAGTGATTCGGAGTAG
Predicted protein sequences of Glyma16g14740
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma16g14740.1 sequence type=predicted peptide gene model=Glyma16g14740 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MSPFDSPQTTADSSLSMSTSTSPSGGDALLKWGHRKRSRLSRAAIEDSSSSVHTNNRRITHTVPPNLSMPPPPLVSSTASSGRGRKHNSPRNLEDPSLGGSESPSRSQGSNPVVSRSAAAPKLSSCGMERSSRRMLSSGSAKCQKPSGFSTTQEASERLNNSSHASVQSEKEGGVATAPATSSLAANGNKVTVGVIQWPKIYIALSRKEKEDDFLAMKGTKIPQRPKKRAKNVDRILQCCFPGMWLSELTKSRYEVREKKSVKKQKRSRGLKGMENLDSDSE*