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Report for Sequence Feature Glyma16g08615

Feature Type:gene_model
Chromosome:Gm16
Start:8027744
stop:8031368
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma16g08615
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G48380AT Annotation by Michelle Graham. TAIR10: BAK1-interacting receptor-like kinase 1 | chr5:19604584-19606532 REVERSE LENGTH=620 SoyBaseE_val: 0ISS
GO:0009627GO-bp Annotation by Michelle Graham. GO Biological Process: systemic acquired resistance SoyBaseN/AISS
GO:0009697GO-bp Annotation by Michelle Graham. GO Biological Process: salicylic acid biosynthetic process SoyBaseN/AISS
GO:0009863GO-bp Annotation by Michelle Graham. GO Biological Process: salicylic acid mediated signaling pathway SoyBaseN/AISS
GO:0031347GO-bp Annotation by Michelle Graham. GO Biological Process: regulation of defense response SoyBaseN/AISS
GO:0031348GO-bp Annotation by Michelle Graham. GO Biological Process: negative regulation of defense response SoyBaseN/AISS
GO:0042742GO-bp Annotation by Michelle Graham. GO Biological Process: defense response to bacterium SoyBaseN/AISS
GO:0045087GO-bp Annotation by Michelle Graham. GO Biological Process: innate immune response SoyBaseN/AISS
GO:0060548GO-bp Annotation by Michelle Graham. GO Biological Process: negative regulation of cell death SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0009506GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma SoyBaseN/AISS
GO:0004672GO-mf Annotation by Michelle Graham. GO Molecular Function: protein kinase activity SoyBaseN/AISS
GO:0005515GO-mf Annotation by Michelle Graham. GO Molecular Function: protein binding SoyBaseN/AISS
GO:0016301GO-mf Annotation by Michelle Graham. GO Molecular Function: kinase activity SoyBaseN/AISS
GO:0033612GO-mf Annotation by Michelle Graham. GO Molecular Function: receptor serine/threonine kinase binding SoyBaseN/AISS
KOG1187 KOG Serine/threonine protein kinase JGI ISS
PTHR24420Panther FAMILY NOT NAMED JGI ISS
PTHR24420:SF477Panther SUBFAMILY NOT NAMED JGI ISS
PF07714PFAM Protein tyrosine kinase JGI ISS
UniRef100_C6FF73UniRef Annotation by Michelle Graham. Best UniRef hit: Protein kinase n=1 Tax=Glycine max RepID=C6FF73_SOYBN SoyBaseE_val: 0ISS
UniRef100_C6FF73UniRef Annotation by Michelle Graham. Most informative UniRef hit: Protein kinase n=1 Tax=Glycine max RepID=C6FF73_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma16g08615
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma16g08615 not represented in the dataset
Glyma16g08615 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma16g08615 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.16g079200 Wm82.a2.v1IGC As supplied by JGI

References for Glyma16g08615
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Transcripts of Glyma16g08615
>Glyma16g08615.2   sequence type=transcript   gene model=Glyma16g08615   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CTCAGGGAAGCACTTTTCACAAGTCTTCGCGTTTCTATGGTCCAAGTCTTTCCTCTATTGCTTGGAAATTTTTGGCTTTAACTTCTTTGACCCGTTCCACTTTCTTTTATATTTCTTCACATTCACATCCACACTATCATCTAAAACGCTCTCAAAGAGCCGAATTACCTGAAAGCTTCATGGGGTTTCCTGAATTTGGCTGTCAAAAAACCCAGGGTGTGCTCTTGGAATGGTTGTAGTGCTATGGAGTTTGTTTGTGTTGTTGCTTGGATTGGATAGCCATTTGAGTGAGGTGTCTGGATTACTTCCTCTTGGCTTGTTTTTATAATCTTGGTAAAGATGGTTCTGCATAGCTGGATTTCCAGCTCTCATATTCTTGTTAATTTCTTGCTGCTGCTTGGTTGTGGCATAACCTACGGGACTGACACTGATATCTTCTGCTTGAAAAGTATCAAAGAATCCCTTGAAGACCCCTATAATTATTTGAAGTTCTCTTGGGATTTCAACAACAAAACTGAAGGGTATATCTGCAGGTTTAATGGGGTTGAGTGTTGGCACCCTGACGAGAACAGGGTCTTGAATCTCAAACTGTCGAATATGGGACTCAAGGGCCAGTTTCCTCGTGGCATTCAAAATTGCTCGAGCTTAACTGGATTAGACCTTTCAATTAACAAACTCTCTGGAACCATTCCGGGAGACATATCCACTCTTATACCATTTGCGACGTCTATTGATCTATCTACAAATGAGTTTTCTGGGGCAATTCCCGTGAGTCTTGCGAATTGTACCTTTCTTAATACCCTTAAACTTGATCAGAATCGACTCACTGGCCAAATTCCTCCACAATTTGGTGTTCTCTCACGAATTAAGGTATTTTCTGTATCCAACAATCTTTTGACGGGGCAAGTTCCAATCTTTAGGGATGGGGTTGAGTTACATTATGCAAATAATCAAGGCCTATGTGGAGGAAATACATTGGCGCCTTGCCAAGCCACGCCTTCCAAGAGTAACATGGCTGTTATTGCTGGAGCTGCTGCTGGCGGGGTGACTCTTGCGGCATTAGGATTGGGTATTGGAATGTTCTTCTTTGTGCGACGTGTTTCTTTCAAGAAGAAGGAAGAGGATCCTGAAGGAAACAAATGGGCAAGAAGTCTAAAAGGAACTAAACGAATTAAGGTTTCTATGTTTGAGAAATCAATTTCAAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAACTTCAGTAATACCAATATCATTGGGACAGGAAGAACAGGAACTGTTTACAAAGCTGTCCTTGACGATGGCACAACTCTTATGGTTAAGAGATTACAGGAATCTCAGTACACTGAAAAAGAATTTATGTCTGAGATGGGTACGCTAGGTACTGTCAAACATCGCAATCTGGTTCCTCTTTTAGGTTTTTGTATGACCAAAAGGGAGAGGCTTTTGGTCTATAAAAACATGCCAAATGGCAACCTCCATGACCAACTCCATCCCGCTGATGGTGTGAGCACCCTTGACTGGACTACAAGGCTCAAAATTGCAATTGGAGCAGCCAAAGGGTTAGCATGGCTTCATCATAGCTGCAATCCCCGTATCATCCACCGAAACATAAGCTCGAAGTGCATCTTGTTGGATGCAGATTTTGAGCCAAAAATTTCTGATTTCGGCCTTGCTAGACTGATGAATCCAATTGATACTCATTTGAGTACTTTTGTAAATGGGGAGTTTGGAGATTTAGGTTATGTTGCTCCTGAGTACACAAGAACTTTGGTTGCTACACCTAAAGGGGATATTTACAGCTTTGGAACTGTTCTTCTTGAGTTGGTGACAGGTGAAAGACCTACCAATGTGTCTAAAGCTCCGGAAACTTTTAAAGGAAATCTGGTAGAATGGATTACGGAGCTCACAAGCAATGCAAAACTCCATGATGCCATTGATGAATCACTAGTCAGAAAGGATGTTGATAGTGAGCTTTTCCAATTTCTAAAGGTTGCATGCAACTGTGTCTCACCAACTCCAAAGGAGAGGCCCACCATGTTTGAAGTGTATCAGCTTTTAAGAGCTATTGGGGGTAGATACAATTTCACAACTGAGGATGATATATTGGTACCTACTGATATTGGTAATACTGATAACATGCAGGAACTTATTGTAGCCCAAGAAGGAAGTTATTGAAAGGTATGTTAGATATATAGGGTATAAATATAATTTATGTAATTGGTATTAAATTTTAATGTGTAATTATATATCTTACTTTGGTGTCCTAAAATAAATGTTAGTGGTAAATGTAGTTTTGAGGATCTAGATCCAGTTGTGTGCTATTGATATTGAAACATCAATATAAGATCATCAATCAAGGAGTAGATATAGTTGAGTTACTTCTTTCTAATCCTTATTTTGATCTGATTTCTTTGTTCTCTTCTCCCTCTTGCATGCTAATGTTTATAAACA
Coding sequences of Glyma16g08615
>Glyma16g08615.1   sequence type=CDS   gene model=Glyma16g08615   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTTCTGCATAGCTGGATTTCCAGCTCTCATATTCTTGTTAATTTCTTGCTGCTGCTTGGTTGTGGCATAACCTACGGGACTGACACTGATATCTTCTGCTTGAAAAGTATCAAAGAATCCCTTGAAGACCCCTATAATTATTTGAAGTTCTCTTGGGATTTCAACAACAAAACTGAAGGGTATATCTGCAGGTTTAATGGGGTTGAGTGTTGGCACCCTGACGAGAACAGGGTCTTGAATCTCAAACTGTCGAATATGGGACTCAAGGGCCAGTTTCCTCGTGGCATTCAAAATTGCTCGAGCTTAACTGGATTAGACCTTTCAATTAACAAACTCTCTGGAACCATTCCGGGAGACATATCCACTCTTATACCATTTGCGACGTCTATTGATCTATCTACAAATGAGTTTTCTGGGGCAATTCCCGTGAGTCTTGCGAATTGTACCTTTCTTAATACCCTTAAACTTGATCAGAATCGACTCACTGGCCAAATTCCTCCACAATTTGGTGTTCTCTCACGAATTAAGGTATTTTCTGTATCCAACAATCTTTTGACGGGGCAAGTTCCAATCTTTAGGGATGGGGTTGAGTTACATTATGCAAATAATCAAGGCCTATGTGGAGGAAATACATTGGCGCCTTGCCAAGCCACGCCTTCCAAGAGTAACATGGCTGTTATTGCTGGAGCTGCTGCTGGCGGGGTGACTCTTGCGGCATTAGGATTGGGTATTGGAATGTTCTTCTTTGTGCGACGTGTTTCTTTCAAGAAGAAGGAAGAGGATCCTGAAGGAAACAAATGGGCAAGAAGTCTAAAAGGAACTAAACGAATTAAGGTTTCTATGTTTGAGAAATCAATTTCAAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAACTTCAGTAATACCAATATCATTGGGACAGGAAGAACAGGAACTGTTTACAAAGCTGTCCTTGACGATGGCACAACTCTTATGGTTAAGAGATTACAGGAATCTCAGTACACTGAAAAAGAATTTATGTCTGAGATGGGTACGCTAGGTACTGTCAAACATCGCAATCTGGTTCCTCTTTTAGGTTTTTGTATGACCAAAAGGGAGAGGCTTTTGGTCTATAAAAACATGCCAAATGGCAACCTCCATGACCAACTCCATCCCGCTGATGGTGTGAGCACCCTTGACTGGACTACAAGGCTCAAAATTGCAATTGGAGCAGCCAAAGGGTTAGCATGGCTTCATCATAGCTGCAATCCCCGTATCATCCACCGAAACATAAGCTCGAAGTGCATCTTGTTGGATGCAGATTTTGAGCCAAAAATTTCTGATTTCGGCCTTGCTAGACTGATGAATCCAATTGATACTCATTTGAGTACTTTTGTAAATGGGGAGTTTGGAGATTTAGGTTATGTTGCTCCTGAGTACACAAGAACTTTGGTTGCTACACCTAAAGGGGATATTTACAGCTTTGGAACTGTTCTTCTTGAGTTGGTGACAGGTGAAAGACCTACCAATGTGTCTAAAGCTCCGGAAACTTTTAAAGGAAATCTGGTAGAATGGATTACGGAGCTCACAAGCAATGCAAAACTCCATGATGCCATTGATGAATCACTAGTCAGAAAGGATGTTGATAGTGAGCTTTTCCAATTTCTAAAGGTTGCATGCAACTGTGTCTCACCAACTCCAAAGGAGAGGCCCACCATGTTTGAAGTGTATCAGCTTTTAAGAGCTATTGGGGGTAGATACAATTTCACAACTGAGGATGATATATTGGTACCTACTGATATTGGTAATACTGATAACATGCAGGAACTTATTGTAGCCCAAGAAGGAAGTTATTGA

>Glyma16g08615.2   sequence type=CDS   gene model=Glyma16g08615   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTTCTGCATAGCTGGATTTCCAGCTCTCATATTCTTGTTAATTTCTTGCTGCTGCTTGGTTGTGGCATAACCTACGGGACTGACACTGATATCTTCTGCTTGAAAAGTATCAAAGAATCCCTTGAAGACCCCTATAATTATTTGAAGTTCTCTTGGGATTTCAACAACAAAACTGAAGGGTATATCTGCAGGTTTAATGGGGTTGAGTGTTGGCACCCTGACGAGAACAGGGTCTTGAATCTCAAACTGTCGAATATGGGACTCAAGGGCCAGTTTCCTCGTGGCATTCAAAATTGCTCGAGCTTAACTGGATTAGACCTTTCAATTAACAAACTCTCTGGAACCATTCCGGGAGACATATCCACTCTTATACCATTTGCGACGTCTATTGATCTATCTACAAATGAGTTTTCTGGGGCAATTCCCGTGAGTCTTGCGAATTGTACCTTTCTTAATACCCTTAAACTTGATCAGAATCGACTCACTGGCCAAATTCCTCCACAATTTGGTGTTCTCTCACGAATTAAGGTATTTTCTGTATCCAACAATCTTTTGACGGGGCAAGTTCCAATCTTTAGGGATGGGGTTGAGTTACATTATGCAAATAATCAAGGCCTATGTGGAGGAAATACATTGGCGCCTTGCCAAGCCACGCCTTCCAAGAGTAACATGGCTGTTATTGCTGGAGCTGCTGCTGGCGGGGTGACTCTTGCGGCATTAGGATTGGGTATTGGAATGTTCTTCTTTGTGCGACGTGTTTCTTTCAAGAAGAAGGAAGAGGATCCTGAAGGAAACAAATGGGCAAGAAGTCTAAAAGGAACTAAACGAATTAAGGTTTCTATGTTTGAGAAATCAATTTCAAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAACTTCAGTAATACCAATATCATTGGGACAGGAAGAACAGGAACTGTTTACAAAGCTGTCCTTGACGATGGCACAACTCTTATGGTTAAGAGATTACAGGAATCTCAGTACACTGAAAAAGAATTTATGTCTGAGATGGGTACGCTAGGTACTGTCAAACATCGCAATCTGGTTCCTCTTTTAGGTTTTTGTATGACCAAAAGGGAGAGGCTTTTGGTCTATAAAAACATGCCAAATGGCAACCTCCATGACCAACTCCATCCCGCTGATGGTGTGAGCACCCTTGACTGGACTACAAGGCTCAAAATTGCAATTGGAGCAGCCAAAGGGTTAGCATGGCTTCATCATAGCTGCAATCCCCGTATCATCCACCGAAACATAAGCTCGAAGTGCATCTTGTTGGATGCAGATTTTGAGCCAAAAATTTCTGATTTCGGCCTTGCTAGACTGATGAATCCAATTGATACTCATTTGAGTACTTTTGTAAATGGGGAGTTTGGAGATTTAGGTTATGTTGCTCCTGAGTACACAAGAACTTTGGTTGCTACACCTAAAGGGGATATTTACAGCTTTGGAACTGTTCTTCTTGAGTTGGTGACAGGTGAAAGACCTACCAATGTGTCTAAAGCTCCGGAAACTTTTAAAGGAAATCTGGTAGAATGGATTACGGAGCTCACAAGCAATGCAAAACTCCATGATGCCATTGATGAATCACTAGTCAGAAAGGATGTTGATAGTGAGCTTTTCCAATTTCTAAAGGTTGCATGCAACTGTGTCTCACCAACTCCAAAGGAGAGGCCCACCATGTTTGAAGTGTATCAGCTTTTAAGAGCTATTGGGGGTAGATACAATTTCACAACTGAGGATGATATATTGGTACCTACTGATATTGGTAATACTGATAACATGCAGGAACTTATTGTAGCCCAAGAAGGAAGTTATTGA
Predicted protein sequences of Glyma16g08615
>Glyma16g08615.1   sequence type=predicted peptide   gene model=Glyma16g08615   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVLHSWISSSHILVNFLLLLGCGITYGTDTDIFCLKSIKESLEDPYNYLKFSWDFNNKTEGYICRFNGVECWHPDENRVLNLKLSNMGLKGQFPRGIQNCSSLTGLDLSINKLSGTIPGDISTLIPFATSIDLSTNEFSGAIPVSLANCTFLNTLKLDQNRLTGQIPPQFGVLSRIKVFSVSNNLLTGQVPIFRDGVELHYANNQGLCGGNTLAPCQATPSKSNMAVIAGAAAGGVTLAALGLGIGMFFFVRRVSFKKKEEDPEGNKWARSLKGTKRIKVSMFEKSISKMKLSDLMKATNNFSNTNIIGTGRTGTVYKAVLDDGTTLMVKRLQESQYTEKEFMSEMGTLGTVKHRNLVPLLGFCMTKRERLLVYKNMPNGNLHDQLHPADGVSTLDWTTRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDIYSFGTVLLELVTGERPTNVSKAPETFKGNLVEWITELTSNAKLHDAIDESLVRKDVDSELFQFLKVACNCVSPTPKERPTMFEVYQLLRAIGGRYNFTTEDDILVPTDIGNTDNMQELIVAQEGSY*

>Glyma16g08615.2   sequence type=predicted peptide   gene model=Glyma16g08615   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVLHSWISSSHILVNFLLLLGCGITYGTDTDIFCLKSIKESLEDPYNYLKFSWDFNNKTEGYICRFNGVECWHPDENRVLNLKLSNMGLKGQFPRGIQNCSSLTGLDLSINKLSGTIPGDISTLIPFATSIDLSTNEFSGAIPVSLANCTFLNTLKLDQNRLTGQIPPQFGVLSRIKVFSVSNNLLTGQVPIFRDGVELHYANNQGLCGGNTLAPCQATPSKSNMAVIAGAAAGGVTLAALGLGIGMFFFVRRVSFKKKEEDPEGNKWARSLKGTKRIKVSMFEKSISKMKLSDLMKATNNFSNTNIIGTGRTGTVYKAVLDDGTTLMVKRLQESQYTEKEFMSEMGTLGTVKHRNLVPLLGFCMTKRERLLVYKNMPNGNLHDQLHPADGVSTLDWTTRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDIYSFGTVLLELVTGERPTNVSKAPETFKGNLVEWITELTSNAKLHDAIDESLVRKDVDSELFQFLKVACNCVSPTPKERPTMFEVYQLLRAIGGRYNFTTEDDILVPTDIGNTDNMQELIVAQEGSY*






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