Report for Sequence Feature Glyma16g07830
Feature Type: gene_model
Chromosome: Gm16
Start: 7097317
stop: 7103353
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma16g07830
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G52790 AT
Annotation by Michelle Graham. TAIR10: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:19662194-19663301 REVERSE LENGTH=310
SoyBase E_val: 1.00E-89 ISS
GO:0055114 GO-bp
Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0016491 GO-mf
Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity
SoyBase N/A ISS
GO:0016706 GO-mf
Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
SoyBase N/A ISS
KOG0143
KOG
Iron/ascorbate family oxidoreductases
JGI ISS
PTHR10209 Panther
FE(II)/ ASCORBATE OXIDASE SUPERFAMILY
JGI ISS
PTHR10209:SF55 Panther
OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEI
JGI ISS
PF03171 PFAM
2OG-Fe(II) oxygenase superfamily
JGI ISS
UniRef100_I1MLV5 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MLV5_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q2HRI0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Gibberellin 20 oxidase n=1 Tax=Medicago truncatula RepID=Q2HRI0_MEDTR
SoyBase E_val: 6.00E-115 ISS
Expression Patterns of Glyma16g07830
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma16g07830 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.16g072000 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma16g07830
Coding sequences of Glyma16g07830
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma16g07830.1 sequence type=CDS gene model=Glyma16g07830 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAATCCCAAACACAGTCTGAGCTACCAGTTGTAGACTTCACCAACAAAAATCTGAAACCGGGTACTGATGCATGGGTTTCAGCTTCTCAAGTAGTGCGTGGTGCACTTGAGGATCATGGTGGTTTCTTGGCACTCTATGATAAGGTCAGTTTGGAGACATACGACTCTGTTTATTCTGAAATGATGAATTTTTTTGACCTCTCAATAGAAACAAAACGGAGGAAAACCACTGAAAAGCCTATATTCAGCTATTCTGGGCAACGACCTGGGATTCCTTTATATGAATCTGTGGGTATCATGAACCCACTCAGCTTTCAGGATTGCCAGAAATACACACACGTTATGTGGCCCCAAGAAAATCATCATTTCTGTGAAAGTGTCAATTCCTATGCAAAACAACTAGTGGAATTGGATCATATTGTAAAGAGAATGGTGTTTGAGAGCTATGGACTCGAGACAAAGAAATTTGAGACTTTACTTGAATCAACTGAGTATGTGCTTCGAGGCTACAAATACAGAATTCCCCGAGAGGGTGAGAGCAATTTGGGAGTTGCTCCTCATTGTGACACAGCTTTCCTAACTATATTGAATCAGAAGGTAGAAGGCTTGGGGGTCAAATTGAAGGATGGGAAATGGTTAGAGGTCGGTGCTTCACCCTCGCTATATTTGGTAATGGGCGGCGATGCATTGATGGTTTGGAGTAATGACAGGATACCCGCTTGTGAACATAGAGTTTTAATGAACTCAAAGATAGACAGATACTCCATGGGACTACTTTCATATGCTGCTAAGATAATGGAACCACAAGAGGAGTTAGTTGATGAGGAATATCCTCTACGTTATAAACCATTTGATCATTATGGATATCTTCGTTTCTTTCTCACTGAAGAGGCCATAAAATCTGATTCCAGGATCAAAGCATATTGTGGTATTTGA
Predicted protein sequences of Glyma16g07830
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma16g07830.1 sequence type=predicted peptide gene model=Glyma16g07830 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MESQTQSELPVVDFTNKNLKPGTDAWVSASQVVRGALEDHGGFLALYDKVSLETYDSVYSEMMNFFDLSIETKRRKTTEKPIFSYSGQRPGIPLYESVGIMNPLSFQDCQKYTHVMWPQENHHFCESVNSYAKQLVELDHIVKRMVFESYGLETKKFETLLESTEYVLRGYKYRIPREGESNLGVAPHCDTAFLTILNQKVEGLGVKLKDGKWLEVGASPSLYLVMGGDALMVWSNDRIPACEHRVLMNSKIDRYSMGLLSYAAKIMEPQEELVDEEYPLRYKPFDHYGYLRFFLTEEAIKSDSRIKAYCGI*