Glyma16g04240 - SoyBase

SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma16g04240

Feature Type:	gene_model
Chromosome:	Gm16
Start:	3592382
stop:	3597724
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma16g04240

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G17920	AT	Annotation by Michelle Graham. TAIR10: Cobalamin-independent synthase family protein \| chr5:5935771-5939195 FORWARD LENGTH=765	SoyBase	E_val: 0	ISS
GO:0008652	GO-bp	Annotation by Michelle Graham. GO Biological Process: cellular amino acid biosynthetic process	SoyBase	N/A	ISS
GO:0009086	GO-bp	Annotation by Michelle Graham. GO Biological Process: methionine biosynthetic process	SoyBase	N/A	ISS
GO:0009651	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to salt stress	SoyBase	N/A	ISS
GO:0010043	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to zinc ion	SoyBase	N/A	ISS
GO:0046686	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to cadmium ion	SoyBase	N/A	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0005774	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: vacuolar membrane	SoyBase	N/A	ISS
GO:0005777	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: peroxisome	SoyBase	N/A	ISS
GO:0005829	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytosol	SoyBase	N/A	ISS
GO:0005886	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane	SoyBase	N/A	ISS
GO:0009506	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma	SoyBase	N/A	ISS
GO:0009507	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: chloroplast	SoyBase	N/A	ISS
GO:0009570	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: chloroplast stroma	SoyBase	N/A	ISS
GO:0016020	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: membrane	SoyBase	N/A	ISS
GO:0048046	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: apoplast	SoyBase	N/A	ISS
GO:0003871	GO-mf	Annotation by Michelle Graham. GO Molecular Function: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	SoyBase	N/A	ISS
GO:0005507	GO-mf	Annotation by Michelle Graham. GO Molecular Function: copper ion binding	SoyBase	N/A	ISS
GO:0008270	GO-mf	Annotation by Michelle Graham. GO Molecular Function: zinc ion binding	SoyBase	N/A	ISS
GO:0008705	GO-mf	Annotation by Michelle Graham. GO Molecular Function: methionine synthase activity	SoyBase	N/A	ISS
KOG2263	KOG	Methionine synthase II (cobalamin-independent)	JGI		ISS
PTHR19960	Panther	TEKTIN RELATED	JGI		ISS
PTHR19960:SF21	Panther	5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEIN	JGI		ISS
PF01717	PFAM	Cobalamin-independent synthase, Catalytic domain	JGI		ISS
PF08267	PFAM	Cobalamin-independent synthase, N-terminal domain	JGI		ISS
UniRef100_Q71EW8	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Methionine synthase n=2 Tax=Papilionoideae RepID=Q71EW8_SOYBN	SoyBase	E_val: 0	ISS
UniRef100_Q71EW8	UniRef	Annotation by Michelle Graham. Best UniRef hit: Methionine synthase n=2 Tax=Papilionoideae RepID=Q71EW8_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma16g04240

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma16g04240

Paralog	Evidence	Comments
Glyma19g29180	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma16g04240 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.16g038300	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma16g04240

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma16g04240

Limit To All Plant Sequences

>Glyma16g04240.2   sequence type=transcript   gene model=Glyma16g04240   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GAAAAGGGAGCTACTCAGATCTGGGGCTGAAAACGGCTATAAATAACCCGTAAACCACTCCTAATACCTCGCACTCTCTTCTCTGCTTCAACTTGCTCCCTCAGAAGCGAAGAAGAAGCCACAGAGAACTAGTCTCCTACTCTCACCCGCAAGAAAAAAATGGCATCTCACATCGTTGGATACCCCCGTATGGGTCCCAAGAGAGAGCTCAAGTTCGCTCTCGAGTCTTTCTGGGATGGCAAGAGCAGCGCCGAGGATTTGCAGAAGGTGTCTTCTGATCTCAGGGCATCCATCTGGAAGCAGATGGCTGATGCTGGGATCAAGTACATCCCCAGCAACACTTTCTCTCACTATGACCAGGTTCTCGACGCCACCGCCACCCTCGGTGCCGTTCCACCAAGGTACGGCTGGACCGGCGGCGAGATTGGGTTTGATACCTACTTCTCCATGGCCAGAGGTAATGCTACCGTGCCAGCTATGGAGATGACCAAGTGGTTCGACACCAACTACCACTTTATTGTCCCTGAATTGGGCCCTGATGTGAACTTCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGCTTGGAGTGGATACCGTTCCGGTCCTCGTTGGCCCTGTTACATACCTGTTGCTCTCCAAGCCTGCCAAGGGAGTTGAGAAATCCTTTTCTCTCCTCTCTCTCCTTCCCAAGGTTCTTGCTGTCTACAAGGAAGTTATTGCTGACCTTAAGGCAGCTGGTGCTTCATGGATTCAGTTTGATGAGCCTACCCTTGTCTTGGACCTTGAGTCTCACAAGTTGCAAGCATTCACTGACGCATATGCAGAACTTGCGCCTGCTTTGTCTGGTTTGAATGTTCTTGTTGAGACCTACTTTGCTGACATCCCTGCTGAGGCATACAAGACCCTCACATCTCTGAATGGCGTCACTGCATATGGATTTGATTTGGTCCGTGGAACCAACACTCTTGATTTGATCAAGGGTGGATTTCCCAGCGGAAAATACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATCTGGGCCAATGACCTTGCTGCTTCTCTCACTACCTTGCAGGGTCTTGAGGGCATTGTGGGCAAAGATAAGCTTGTTGTGTCCACCTCCTCCTCCCTTCTTCACACTGCTGTTGATCTAGTTAACGAGACCAAGTTGGATGATGAGATCAAGTCATGGCTAGCTTTTGCTGCCCAAAAAATTGTTGAAGTTAACGCATTGGCTAAAGCATTGTCTGGCCACAAGGATGAGGCCTTCTTCTCTGGTAATGCTGCTGCTCTGGCTTCAAGGAAGTCTTCTCCAAGAGTGACCAACGAGGCTGTTCAGAAGGCTGCTGCTGCATTGAAGGGTTCAGATCATCGCCGTGCAACAAATGTCAGTGCCAGACTGGATTCTCAACAAAAGAAGCTCAACCTTCCAATCCTGCCAACCACCACTATTGGATCCTTCCCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGTTGTTGAGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCACCGTTAATGGGTGGGTGCAATCCTATGGTTCCCGTTGCGTGAAGCCACCGATCATCTATGGTGATGTGAGCCGCCCAAAGCCAATGACCGTCTTCTGGTCATCTCTGGCTCAGAGCTTTACCAAGCGCCCAATGAAGGGAATGCTTACCGGTCCTGTTACCATTCTCAACTGGTCCTTTGTTAGAAATGACCAACCTAGATCTGAGACCACCTACCAGATTGCTTTGTCTATCAAGGACGAAGTGGAAGACCTTGAAAAGGCTGGCATCACTGTTATCCAAATTGATGAAGCTGCTTTGAGAGAGGGTCTTCCACTGAGGAAATCAGAGCAAGCTCACTACTTGGACTGGGCTGTCCATGCCTTCAGAATCACCAATGTTGGTGTCCAGGATACCACCCAGGTACACTCTTTTGGATCATCGCAAATCACTGAATTAGAAATTTTTTTTGTTCATCCTCATTTTCACATATGTTGTAATAATCAACTTTTCGTATTGACAGATCCACACTCACATGTGCTACTCGAACTTCAACGACATCATCCACTCCATCATCGACATGGACGCCGATGTTATCACCATTGAGAACTCTCGCTCCGACGAGAAGCTTCTGTCAGTCTTCCGCGAAGGTGTGAAGTATGGTGCTGGAATTGGCCCTGGTGTCTATGACATCCACTCCCCAAGAATACCACCAACTGAAGAAATTGCTGACAGAATCAACAAGATGCTGGCAGTGCTCGAGAAGAACATCTTGTGGGTGAACCCTGACTGTGGGCTCAAGACCCGTAAGTACACTGAGGTGAAGCCAGCCCTCACAAACATGGTTGCCGCAGCAAAACTCATCCGCAACGAACTTGCCAAGTGAATGGTATAAGAAAGTAGAATCTTCCAAGTCATTTGGTTCTGCTTTATATTATAATACACCAAAGAAAAATTTTCTCTATATTGGGTTGTTTCAATAACTGTGTGTGGAATATTTAGGTGTCTTAGCATGCTCTGTGAGCAATTGATTCTTCCTCAACCCCTCCCCCCTTATTTTTCCCCACTCCTGTTTTCCCTAATGAATGTTGTATCTTTGCGGCTTCGCCGCAATCCTTATTGATCTGGAATTTTACCAGTTTTGTGCAAATAACTATGAGCATCTATATCGAGTATTTCAAAATACATGCTTAAGAAAAAAA

>Glyma16g04240.3   sequence type=transcript   gene model=Glyma16g04240   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AACCCCTGCACCCACAAATTCATGGCCATAGAAATAAAAAAAAAGTAGGAATTTTCTTTTAATTAATAAGTCATTAATAGCAAGAATGAAGAAAATGTGAAGAGAAAAGGGAGCTACTCAGATCTGGGGCTGAAAACGGCTATAAATAACCCGTAAACCACTCCTAATACCTCGCACTCTCTTCTCTGCTTCAACTTGCTCCCTCAGAAGCGAAGAAGAAGCCACAGAGAACTAGTCTCCTACTCTCACCCGCAAGAAAAAAATGGCATCTCACATCGTTGGATACCCCCGTATGGGTCCCAAGAGAGAGCTCAAGTTCGCTCTCGAGTCTTTCTGGGATGGCAAGAGCAGCGCCGAGGATTTGCAGAAGGTGTCTTCTGATCTCAGGGCATCCATCTGGAAGCAGATGGCTGATGCTGGGATCAAGTACATCCCCAGCAACACTTTCTCTCACTATGACCAGGTTCTCGACGCCACCGCCACCCTCGGTGCCGTTCCACCAAGGTACGGCTGGACCGGCGGCGAGATTGGGTTTGATACCTACTTCTCCATGGCCAGAGGTAATGCTACCGTGCCAGCTATGGAGATGACCAAGTGGTTCGACACCAACTACCACTTTATTGTCCCTGAATTGGGCCCTGATGTGAACTTCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGCTTGGAGTGGATACCGTTCCGGTCCTCGTTGGCCCTGTTACATACCTGTTGCTCTCCAAGCCTGCCAAGGGAGTTGAGAAATCCTTTTCTCTCCTCTCTCTCCTTCCCAAGGTTCTTGCTGTCTACAAGGAAGTTATTGCTGACCTTAAGGCAGCTGGTGCTTCATGGATTCAGTTTGATGAGCCTACCCTTGTCTTGGACCTTGAGTCTCACAAGTTGCAAGCATTCACTGACGCATATGCAGAACTTGCGCCTGCTTTGTCTGGTTTGAATGTTCTTGTTGAGACCTACTTTGCTGACATCCCTGCTGAGGCATACAAGACCCTCACATCTCTGAATGGCGTCACTGCATATGGATTTGATTTGGTCCGTGGAACCAACACTCTTGATTTGATCAAGGGTGGATTTCCCAGCGGAAAATACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATCTGGGCCAATGACCTTGCTGCTTCTCTCACTACCTTGCAGGGTCTTGAGGGCATTGTGGGCAAAGATAAGCTTGTTGTGTCCACCTCCTCCTCCCTTCTTCACACTGCTGTTGATCTAGTTAACGAGACCAAGTTGGATGATGAGATCAAGTCATGGCTAGCTTTTGCTGCCCAAAAAATTGTTGAAGTTAACGCATTGGCTAAAGCATTGTCTGGCCACAAGGATGAGGCCTTCTTCTCTGGTAATGCTGCTGCTCTGGCTTCAAGGAAGTCTTCTCCAAGAGTGACCAACGAGGCTGTTCAGAAGGCTGCTGCTGCATTGAAGGGTTCAGATCATCGCCGTGCAACAAATGTCAGTGCCAGACTGGATTCTCAACAAAAGAAGCTCAACCTTCCAATCCTGCCAACCACCACTATTGGATCCTTCCCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGTTGTTGAGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCACCGTTAATGGGTGGGTGCAATCCTATGGTTCCCGTTGCGTGAAGCCACCGATCATCTATGGTGATGTGAGCCGCCCAAAGCCAATGACCGTCTTCTGGTCATCTCTGGCTCAGAGCTTTACCAAGCGCCCAATGAAGGGAATGCTTACCGGTCCTGTTACCATTCTCAACTGGTCCTTTGTTAGAAATGACCAACCTAGATCTGAGACCACCTACCAGATTGCTTTGTCTATCAAGGACGAAGTGGAAGACCTTGAAAAGGCTGGCATCACTGTTATCCAAATTGATGAAGCTGCTTTGAGAGAGGGTCTTCCACTGAGGAAATCAGAGCAAGCTCACTACTTGGACTGGGCTGTCCATGCCTTCAGAATCACCAATGTTGGTGTCCAGGATACCACCCAGATCCACACTCACATGTGCTACTCGAACTTCAACGACATCATCCACTCCATCATCGACATGGACGCCGATGTTATCACCATTGAGAACTCTCGCTCCGACGAGAAGCTTCTGTCAGTCTTCCGCGAAGGTGTGAAGTATGGTGCTGGAATTGGCCCTGGTGTCTATGACATCCACTCCCCAAGAATACCACCAACTGAAGAAATTGCTGACAGAATCAACAAGATGCTGGCAGTGCTCGAGAAGAACATCTTGTGGGTGAACCCTGACTGTGGGCTCAAGACCCGTAAGTACACTGAGGTGAAGCCAGCCCTCACAAACATGGTTGCCGCAGCAAAACTCATCCGCAACGAACTTGCCAAGTGAATGGTATAAGAAAGTAGAATCTTCCAAGTCATTTGGTTCTGCTTTATATTATAATACACCAAAGAAAAATTTTCTCTATATTGGGTTGTTTCAATAACTGTGTGTGGAATATTTAGGTGTCTTAGCATGCTCTGTGAGCAATTGATTCTTCCTCAACCCCTCCCCCCTTATTTTTCCCCACTCCTGTTTTCCCTAATGAATGTTGTATCTTTGCGGCTTCGCCGCAATCCTTATTGATCTGGAATTTTACCAGTTTTGTGCAAATAACTATGAGCATCTATATCGAGTATTTCAAAATACATGCTTAAGAAAAAAAGGTTTCAGAGTATTTCTTT

Coding sequences of Glyma16g04240

Limit To All Plant Sequences

>Glyma16g04240.1   sequence type=CDS   gene model=Glyma16g04240   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCATCTCACATCGTTGGATACCCCCGTATGGGTCCCAAGAGAGAGCTCAAGTTCGCTCTCGAGTCTTTCTGGGATGGCAAGAGCAGCGCCGAGGATTTGCAGAAGGTGTCTTCTGATCTCAGGGCATCCATCTGGAAGCAGATGGCTGATGCTGGGATCAAGTACATCCCCAGCAACACTTTCTCTCACTATGACCAGGTTCTCGACGCCACCGCCACCCTCGGTGCCGTTCCACCAAGGTACGGCTGGACCGGCGGCGAGATTGGGTTTGATACCTACTTCTCCATGGCCAGAGGTAATGCTACCGTGCCAGCTATGGAGATGACCAAGTGGTTCGACACCAACTACCACTTTATTGTCCCTGAATTGGGCCCTGATGTGAACTTCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGCTTGGAGTGGATACCGTTCCGGTCCTCGTTGGCCCTGTTACATACCTGTTGCTCTCCAAGCCTGCCAAGGGAGTTGAGAAATCCTTTTCTCTCCTCTCTCTCCTTCCCAAGGTTCTTGCTGTCTACAAGGAAGTTATTGCTGACCTTAAGGCAGCTGGTGCTTCATGGATTCAGTTTGATGAGCCTACCCTTGTCTTGGACCTTGAGTCTCACAAGTTGCAAGCATTCACTGACGCATATGCAGAACTTGCGCCTGCTTTGTCTGGTTTGAATGTTCTTGTTGAGACCTACTTTGCTGACATCCCTGCTGAGGCATACAAGACCCTCACATCTCTGAATGGCGTCACTGCATATGGATTTGATTTGGTCCGTGGAACCAACACTCTTGATTTGATCAAGGGTGGATTTCCCAGCGGAAAATACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATCTGGGCCAATGACCTTGCTGCTTCTCTCACTACCTTGCAGGGTCTTGAGGGCATTGTGGGCAAAGATAAGCTTGTTGTGTCCACCTCCTCCTCCCTTCTTCACACTGCTGTTGATCTAGTTAACGAGACCAAGTTGGATGATGAGATCAAGTCATGGCTAGCTTTTGCTGCCCAAAAAATTGTTGAAGTTAACGCATTGGCTAAAGCATTGTCTGGCCACAAGGATGAGGCCTTCTTCTCTGGTAATGCTGCTGCTCTGGCTTCAAGGAAGTCTTCTCCAAGAGTGACCAACGAGGCTGTTCAGAAGGCTGCTGCTGCATTGAAGGGTTCAGATCATCGCCGTGCAACAAATGTCAGTGCCAGACTGGATTCTCAACAAAAGAAGCTCAACCTTCCAATCCTGCCAACCACCACTATTGGATCCTTCCCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGTTGTTGAGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCACCGTTAATGGGTGGGTGCAATCCTATGGTTCCCGTTGCGTGAAGCCACCGATCATCTATGGTGATGTGAGCCGCCCAAAGCCAATGACCGTCTTCTGGTCATCTCTGGCTCAGAGCTTTACCAAGCGCCCAATGAAGGGAATGCTTACCGGTCCTGTTACCATTCTCAACTGGTCCTTTGTTAGAAATGACCAACCTAGATCTGAGACCACCTACCAGATTGCTTTGTCTATCAAGGACGAAGTGGAAGACCTTGAAAAGGCTGGCATCACTGTTATCCAAATTGATGAAGCTGCTTTGAGAGAGGGTCTTCCACTGAGGAAATCAGAGCAAGCTCACTACTTGGACTGGGCTGTCCATGCCTTCAGAATCACCAATGTTGGTGTCCAGGATACCACCCAGATCCACACTCACATGTGCTACTCGAACTTCAACGACATCATCCACTCCATCATCGACATGGACGCCGATGTTATCACCATTGAGAACTCTCGCTCCGACGAGAAGCTTCTGTCAGTCTTCCGCGAAGGTGTGAAGTATGGTGCTGGAATTGGCCCTGGTGTCTATGACATCCACTCCCCAAGAATACCACCAACTGAAGAAATTGCTGACAGAATCAACAAGATGCTGGCAGTGCTCGAGAAGAACATCTTGTGGGTGAACCCTGACTGTGGGCTCAAGACCCGTAAGTACACTGAGGTGAAGCCAGCCCTCACAAACATGGTTGCCGCAGCAAAACTCATCCGCAACGAACTTGCCAAGTGA

>Glyma16g04240.2   sequence type=CDS   gene model=Glyma16g04240   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCATCTCACATCGTTGGATACCCCCGTATGGGTCCCAAGAGAGAGCTCAAGTTCGCTCTCGAGTCTTTCTGGGATGGCAAGAGCAGCGCCGAGGATTTGCAGAAGGTGTCTTCTGATCTCAGGGCATCCATCTGGAAGCAGATGGCTGATGCTGGGATCAAGTACATCCCCAGCAACACTTTCTCTCACTATGACCAGGTTCTCGACGCCACCGCCACCCTCGGTGCCGTTCCACCAAGGTACGGCTGGACCGGCGGCGAGATTGGGTTTGATACCTACTTCTCCATGGCCAGAGGTAATGCTACCGTGCCAGCTATGGAGATGACCAAGTGGTTCGACACCAACTACCACTTTATTGTCCCTGAATTGGGCCCTGATGTGAACTTCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGCTTGGAGTGGATACCGTTCCGGTCCTCGTTGGCCCTGTTACATACCTGTTGCTCTCCAAGCCTGCCAAGGGAGTTGAGAAATCCTTTTCTCTCCTCTCTCTCCTTCCCAAGGTTCTTGCTGTCTACAAGGAAGTTATTGCTGACCTTAAGGCAGCTGGTGCTTCATGGATTCAGTTTGATGAGCCTACCCTTGTCTTGGACCTTGAGTCTCACAAGTTGCAAGCATTCACTGACGCATATGCAGAACTTGCGCCTGCTTTGTCTGGTTTGAATGTTCTTGTTGAGACCTACTTTGCTGACATCCCTGCTGAGGCATACAAGACCCTCACATCTCTGAATGGCGTCACTGCATATGGATTTGATTTGGTCCGTGGAACCAACACTCTTGATTTGATCAAGGGTGGATTTCCCAGCGGAAAATACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATCTGGGCCAATGACCTTGCTGCTTCTCTCACTACCTTGCAGGGTCTTGAGGGCATTGTGGGCAAAGATAAGCTTGTTGTGTCCACCTCCTCCTCCCTTCTTCACACTGCTGTTGATCTAGTTAACGAGACCAAGTTGGATGATGAGATCAAGTCATGGCTAGCTTTTGCTGCCCAAAAAATTGTTGAAGTTAACGCATTGGCTAAAGCATTGTCTGGCCACAAGGATGAGGCCTTCTTCTCTGGTAATGCTGCTGCTCTGGCTTCAAGGAAGTCTTCTCCAAGAGTGACCAACGAGGCTGTTCAGAAGGCTGCTGCTGCATTGAAGGGTTCAGATCATCGCCGTGCAACAAATGTCAGTGCCAGACTGGATTCTCAACAAAAGAAGCTCAACCTTCCAATCCTGCCAACCACCACTATTGGATCCTTCCCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGTTGTTGAGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCACCGTTAATGGGTGGGTGCAATCCTATGGTTCCCGTTGCGTGAAGCCACCGATCATCTATGGTGATGTGAGCCGCCCAAAGCCAATGACCGTCTTCTGGTCATCTCTGGCTCAGAGCTTTACCAAGCGCCCAATGAAGGGAATGCTTACCGGTCCTGTTACCATTCTCAACTGGTCCTTTGTTAGAAATGACCAACCTAGATCTGAGACCACCTACCAGATTGCTTTGTCTATCAAGGACGAAGTGGAAGACCTTGAAAAGGCTGGCATCACTGTTATCCAAATTGATGAAGCTGCTTTGAGAGAGGGTCTTCCACTGAGGAAATCAGAGCAAGCTCACTACTTGGACTGGGCTGTCCATGCCTTCAGAATCACCAATGTTGGTGTCCAGGATACCACCCAGGTACACTCTTTTGGATCATCGCAAATCACTGAATTAGAAATTTTTTTTGTTCATCCTCATTTTCACATATGTTGTAATAATCAACTTTTCGTATTGACAGATCCACACTCACATGTGCTACTCGAACTTCAACGACATCATCCACTCCATCATCGACATGGACGCCGATGTTATCACCATTGA

>Glyma16g04240.3   sequence type=CDS   gene model=Glyma16g04240   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCATCTCACATCGTTGGATACCCCCGTATGGGTCCCAAGAGAGAGCTCAAGTTCGCTCTCGAGTCTTTCTGGGATGGCAAGAGCAGCGCCGAGGATTTGCAGAAGGTGTCTTCTGATCTCAGGGCATCCATCTGGAAGCAGATGGCTGATGCTGGGATCAAGTACATCCCCAGCAACACTTTCTCTCACTATGACCAGGTTCTCGACGCCACCGCCACCCTCGGTGCCGTTCCACCAAGGTACGGCTGGACCGGCGGCGAGATTGGGTTTGATACCTACTTCTCCATGGCCAGAGGTAATGCTACCGTGCCAGCTATGGAGATGACCAAGTGGTTCGACACCAACTACCACTTTATTGTCCCTGAATTGGGCCCTGATGTGAACTTCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGCTTGGAGTGGATACCGTTCCGGTCCTCGTTGGCCCTGTTACATACCTGTTGCTCTCCAAGCCTGCCAAGGGAGTTGAGAAATCCTTTTCTCTCCTCTCTCTCCTTCCCAAGGTTCTTGCTGTCTACAAGGAAGTTATTGCTGACCTTAAGGCAGCTGGTGCTTCATGGATTCAGTTTGATGAGCCTACCCTTGTCTTGGACCTTGAGTCTCACAAGTTGCAAGCATTCACTGACGCATATGCAGAACTTGCGCCTGCTTTGTCTGGTTTGAATGTTCTTGTTGAGACCTACTTTGCTGACATCCCTGCTGAGGCATACAAGACCCTCACATCTCTGAATGGCGTCACTGCATATGGATTTGATTTGGTCCGTGGAACCAACACTCTTGATTTGATCAAGGGTGGATTTCCCAGCGGAAAATACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATCTGGGCCAATGACCTTGCTGCTTCTCTCACTACCTTGCAGGGTCTTGAGGGCATTGTGGGCAAAGATAAGCTTGTTGTGTCCACCTCCTCCTCCCTTCTTCACACTGCTGTTGATCTAGTTAACGAGACCAAGTTGGATGATGAGATCAAGTCATGGCTAGCTTTTGCTGCCCAAAAAATTGTTGAAGTTAACGCATTGGCTAAAGCATTGTCTGGCCACAAGGATGAGGCCTTCTTCTCTGGTAATGCTGCTGCTCTGGCTTCAAGGAAGTCTTCTCCAAGAGTGACCAACGAGGCTGTTCAGAAGGCTGCTGCTGCATTGAAGGGTTCAGATCATCGCCGTGCAACAAATGTCAGTGCCAGACTGGATTCTCAACAAAAGAAGCTCAACCTTCCAATCCTGCCAACCACCACTATTGGATCCTTCCCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAACAAGATCTCCGAGGAAGAGTATGTAAAGTCAATTAAGGAGGAAATTCGCAAAGTTGTTGAGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCACCGTTAATGGGTGGGTGCAATCCTATGGTTCCCGTTGCGTGAAGCCACCGATCATCTATGGTGATGTGAGCCGCCCAAAGCCAATGACCGTCTTCTGGTCATCTCTGGCTCAGAGCTTTACCAAGCGCCCAATGAAGGGAATGCTTACCGGTCCTGTTACCATTCTCAACTGGTCCTTTGTTAGAAATGACCAACCTAGATCTGAGACCACCTACCAGATTGCTTTGTCTATCAAGGACGAAGTGGAAGACCTTGAAAAGGCTGGCATCACTGTTATCCAAATTGATGAAGCTGCTTTGAGAGAGGGTCTTCCACTGAGGAAATCAGAGCAAGCTCACTACTTGGACTGGGCTGTCCATGCCTTCAGAATCACCAATGTTGGTGTCCAGGATACCACCCAGATCCACACTCACATGTGCTACTCGAACTTCAACGACATCATCCACTCCATCATCGACATGGACGCCGATGTTATCACCATTGAGAACTCTCGCTCCGACGAGAAGCTTCTGTCAGTCTTCCGCGAAGGTGTGAAGTATGGTGCTGGAATTGGCCCTGGTGTCTATGACATCCACTCCCCAAGAATACCACCAACTGAAGAAATTGCTGACAGAATCAACAAGATGCTGGCAGTGCTCGAGAAGAACATCTTGTGGGTGAACCCTGACTGTGGGCTCAAGACCCGTAAGTACACTGAGGTGAAGCCAGCCCTCACAAACATGGTTGCCGCAGCAAAACTCATCCGCAACGAACTTGCCAAGTGA

Predicted protein sequences of Glyma16g04240

Limit To All Plant Sequences

>Glyma16g04240.1   sequence type=predicted peptide   gene model=Glyma16g04240   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSSDLRASIWKQMADAGIKYIPSNTFSHYDQVLDATATLGAVPPRYGWTGGEIGFDTYFSMARGNATVPAMEMTKWFDTNYHFIVPELGPDVNFTYASHKAVDEYKEAKALGVDTVPVLVGPVTYLLLSKPAKGVEKSFSLLSLLPKVLAVYKEVIADLKAAGASWIQFDEPTLVLDLESHKLQAFTDAYAELAPALSGLNVLVETYFADIPAEAYKTLTSLNGVTAYGFDLVRGTNTLDLIKGGFPSGKYLFAGVVDGRNIWANDLAASLTTLQGLEGIVGKDKLVVSTSSSLLHTAVDLVNETKLDDEIKSWLAFAAQKIVEVNALAKALSGHKDEAFFSGNAAALASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDSQQKKLNLPILPTTTIGSFPQTVELRRVRREFKANKISEEEYVKSIKEEIRKVVELQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSLAQSFTKRPMKGMLTGPVTILNWSFVRNDQPRSETTYQIALSIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQAHYLDWAVHAFRITNVGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLEKNILWVNPDCGLKTRKYTEVKPALTNMVAAAKLIRNELAK*

>Glyma16g04240.2   sequence type=predicted peptide   gene model=Glyma16g04240   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSSDLRASIWKQMADAGIKYIPSNTFSHYDQVLDATATLGAVPPRYGWTGGEIGFDTYFSMARGNATVPAMEMTKWFDTNYHFIVPELGPDVNFTYASHKAVDEYKEAKALGVDTVPVLVGPVTYLLLSKPAKGVEKSFSLLSLLPKVLAVYKEVIADLKAAGASWIQFDEPTLVLDLESHKLQAFTDAYAELAPALSGLNVLVETYFADIPAEAYKTLTSLNGVTAYGFDLVRGTNTLDLIKGGFPSGKYLFAGVVDGRNIWANDLAASLTTLQGLEGIVGKDKLVVSTSSSLLHTAVDLVNETKLDDEIKSWLAFAAQKIVEVNALAKALSGHKDEAFFSGNAAALASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDSQQKKLNLPILPTTTIGSFPQTVELRRVRREFKANKISEEEYVKSIKEEIRKVVELQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSLAQSFTKRPMKGMLTGPVTILNWSFVRNDQPRSETTYQIALSIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQAHYLDWAVHAFRITNVGVQDTTQVHSFGSSQITELEIFFVHPHFHICCNNQLFVLTDPHSHVLLELQRHHPLHHRHGRRCYHH*

>Glyma16g04240.3   sequence type=predicted peptide   gene model=Glyma16g04240   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSSDLRASIWKQMADAGIKYIPSNTFSHYDQVLDATATLGAVPPRYGWTGGEIGFDTYFSMARGNATVPAMEMTKWFDTNYHFIVPELGPDVNFTYASHKAVDEYKEAKALGVDTVPVLVGPVTYLLLSKPAKGVEKSFSLLSLLPKVLAVYKEVIADLKAAGASWIQFDEPTLVLDLESHKLQAFTDAYAELAPALSGLNVLVETYFADIPAEAYKTLTSLNGVTAYGFDLVRGTNTLDLIKGGFPSGKYLFAGVVDGRNIWANDLAASLTTLQGLEGIVGKDKLVVSTSSSLLHTAVDLVNETKLDDEIKSWLAFAAQKIVEVNALAKALSGHKDEAFFSGNAAALASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDSQQKKLNLPILPTTTIGSFPQTVELRRVRREFKANKISEEEYVKSIKEEIRKVVELQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSLAQSFTKRPMKGMLTGPVTILNWSFVRNDQPRSETTYQIALSIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQAHYLDWAVHAFRITNVGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLEKNILWVNPDCGLKTRKYTEVKPALTNMVAAAKLIRNELAK*

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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