Glyma16g03760 - SoyBase

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Report for Sequence Feature Glyma16g03760

Feature Type:	gene_model
Chromosome:	Gm16
Start:	3137419
stop:	3139791
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma16g03760

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G15480	AT	Annotation by Michelle Graham. TAIR10: UDP-glucosyl transferase 73B5 \| chr2:6758817-6763398 FORWARD LENGTH=494	SoyBase	E_val: 2.00E-112	ISS
GO:0008152	GO-bp	Annotation by Michelle Graham. GO Biological Process: metabolic process	SoyBase	N/A	ISS
GO:0009407	GO-bp	Annotation by Michelle Graham. GO Biological Process: toxin catabolic process	SoyBase	N/A	ISS
GO:0009723	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to ethylene stimulus	SoyBase	N/A	ISS
GO:0010583	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to cyclopentenone	SoyBase	N/A	ISS
GO:0051707	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to other organism	SoyBase	N/A	ISS
GO:0008194	GO-mf	Annotation by Michelle Graham. GO Molecular Function: UDP-glycosyltransferase activity	SoyBase	N/A	ISS
GO:0016757	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups	SoyBase	N/A	ISS
GO:0016758	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups	SoyBase	N/A	ISS
GO:0035251	GO-mf	Annotation by Michelle Graham. GO Molecular Function: UDP-glucosyltransferase activity	SoyBase	N/A	ISS
GO:0080043	GO-mf	Annotation by Michelle Graham. GO Molecular Function: quercetin 3-O-glucosyltransferase activity	SoyBase	N/A	ISS
KOG1192	KOG	UDP-glucuronosyl and UDP-glucosyl transferase	JGI		ISS
PTHR11926	Panther	GLUCOSYL/GLUCURONOSYL TRANSFERASES	JGI		ISS
PTHR11926:SF15	Panther	UDP-GLUCURONOSYLTRANSFERASE RELATED	JGI		ISS
PF00201	PFAM	UDP-glucoronosyl and UDP-glucosyl transferase	JGI		ISS
UniRef100_E9M5F7	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Glycosyltransferase GT18P15 n=1 Tax=Pueraria montana var. lobata RepID=E9M5F7_PUEML	SoyBase	E_val: 0	ISS
UniRef100_I1MKT8	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MKT8_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma16g03760

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma16g03760 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.16g033700	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma16g03760

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma16g03760

Limit To All Plant Sequences

>Glyma16g03760.2   sequence type=transcript   gene model=Glyma16g03760   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AAAGCAGTATCTTGAAGAGAAAAAAGAAATAAAAAAGGGTATCATCAGACTAGAGAGAGTAAGAGTAAGAGAAGAGATGGAAAGAGTAGCATCAGTATCTCGGCCACTGAAAATATACTTCCTCCCATTCTTCTCACCGGGGCACCTAATCCCTCTGGTCCAGCTGGCTCGCTTGGTGGCGGCACGAGGCCAGCACGTGACCATCATCACCACCCCCGCCAACGCTCAACTCTTCGACCAGAACATCGACAAGGACACCGCCTCCGGCCACCACATCCGCGTCCACATCATCAAGTTCCCCAACGCCCACGTAGGGCTACCGGAAGGCATCGAGCACCTCTCCGCCGCCACCAACAATGAAACCGCCTACAAGATCCACATGGCGGCGCATCTCATCATGCCCCAGCTCGAGTCTCTGGTCAAACACTCTCCACCGGACGTCTTCATCCCTGACATCCTCTTCACCTGGACCAAAGACTTCTCCCAGAAACTCTCCATCTCGCGGCTAGTCTTCAACCCTATTTCCATCTTCGACGTCTGCATGATCCACGCCATTAAAACCCACCCTGAAGCCTTCGCTTCCGACTCTGGGCCTTTTCTAATTCCTGATCTACCCCACCCTTTAACTCTCCCCGTCAAGCCTTCCCCCGGTTTCGCCGCCTTAACCGAATCTCTCCTCGACGGGGAACAGGACAGTCACGGCGTCATCGTAAACAGCTTCGCCGATCTCGACGCCGAGTACACTCAACACTACCAGAAACTTACAGGGCGCAAGGTGTGGCATGTTGGGCCAAGCTCCCTCATGGTGCAAAAGACGGTGAAAAGTAGTACTGTTGATGAGAGTAGACACGATTGTCTCACGTGGCTTGACTCAAAGAAAGAATCTTCGGTTCTCTACATTTGTTTCGGAAGCCTTTCTCTCATCTCCGACGAGCAGCTTTACCAGATTGCTACCGGACTCGAAGGGTCAGGGCATTGTTTTCTTTGGGTGGTGCATCGCAAAAACAAAGACGGAGAAGAAGGAGATTCTTCTTCTTCTTCCGGAAAGTGGTTGCCGGAAGGGTTTGAGGAAAAGATAGCTAAGGAGAACAGAGGCATGCTGATTAAGGGATGGGCGCCGCAGCCGTTGATCCTGAACCACCCTGCGGTGGGAGGATTTTTAACGCACTGCGGGTGGAACGCGGTGGCGGAGGCGATCAGCTCCGGGGTTCCGATGGTGACAATGCCGGCTTTCGGGGACCAGTACTATAACGAGAAGCTGATAACGGAGGTGCACGGGTTCGGGGTGGAGGTGGGGGCGGCGGAGTGGAGCATTTCGCCGTACGAGGGGAAGAAGAAGGTGGTGAGTGGGGAGAGGATAGAGAGTGCCGTGAAGAGAATGAGAAGCAAGGCCAAAGAGATGCAGGAGAAGGCTTGGAAAGCTGTTCAAGAAGGTGGTTCTTCTTACGACAGTCTCACGGCTCTGATTCATCATTTCAAGACTCTTGTGCCTAATCATGTGAATGGGAATGGGAATATCGATCACTGAATGAATATTACATTGATTCGAGTTTCATGTTTTTGATTATTAGTTATTTATCAAGTGAATGCATGAATGCCATAATTTTAGGGAATCTTAATCCGGGTAACTGGCTAGCTACCCTAAATTTCCTGAATCTATCATCCTTAATTTGTAACAATTGATAATAATAAATCAATAAGATGTATGTCAGTGGATTCTGATACTTAGAATATTTTGAGTTCTTAAGCACCGATACTTCTTTTGGCCAACATACCGGTATCGGATACGTATCCAGTACTGATATGCTC

Coding sequences of Glyma16g03760

Limit To All Plant Sequences

>Glyma16g03760.1   sequence type=CDS   gene model=Glyma16g03760   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAAAGAGTAGCATCAGTATCTCGGCCACTGAAAATATACTTCCTCCCATTCTTCTCACCGGGGCACCTAATCCCTCTGGTCCAGCTGGCTCGCTTGGTGGCGGCACGAGGCCAGCACGTGACCATCATCACCACCCCCGCCAACGCTCAACTCTTCGACCAGAACATCGACAAGGACACCGCCTCCGGCCACCACATCCGCGTCCACATCATCAAGTTCCCCAACGCCCACGTAGGGCTACCGGAAGGCATCGAGCACCTCTCCGCCGCCACCAACAATGAAACCGCCTACAAGATCCACATGGCGGCGCATCTCATCATGCCCCAGCTCGAGTCTCTGGTCAAACACTCTCCACCGGACGTCTTCATCCCTGACATCCTCTTCACCTGGACCAAAGACTTCTCCCAGAAACTCTCCATCTCGCGGCTAGTCTTCAACCCTATTTCCATCTTCGACGTCTGCATGATCCACGCCATTAAAACCCACCCTGAAGCCTTCGCTTCCGACTCTGGGCCTTTTCTAATTCCTGATCTACCCCACCCTTTAACTCTCCCCGTCAAGCCTTCCCCCGGTTTCGCCGCCTTAACCGAATCTCTCCTCGACGGGGAACAGGACAGTCACGGCGTCATCGTAAACAGCTTCGCCGATCTCGACGCCGAGTACACTCAACACTACCAGAAACTTACAGGGCGCAAGGTGTGGCATGTTGGGCCAAGCTCCCTCATGGTGCAAAAGACGGTGAAAAGTAGTACTGTTGATGAGAGTAGACACGATTGTCTCACGTGGCTTGACTCAAAGAAAGAATCTTCGGTTCTCTACATTTGTTTCGGAAGCCTTTCTCTCATCTCCGACGAGCAGCTTTACCAGATTGCTACCGGACTCGAAGGGTCAGGGCATTGTTTTCTTTGGGTGGTGCATCGCAAAAACAAAGACGGAGAAGAAGGAGATTCTTCTTCTTCTTCCGGAAAGTGGTTGCCGGAAGGGTTTGAGGAAAAGATAGCTAAGGAGAACAGAGGCATGCTGATTAAGGGATGGGCGCCGCAGCCGTTGATCCTGAACCACCCTGCGGTGGGAGGATTTTTAACGCACTGCGGGTGGAACGCGGTGGCGGAGGCGATCAGCTCCGGGGTTCCGATGGTGACAATGCCGGCTTTCGGGGACCAGTACTATAACGAGAAGCTGATAACGGAGGTGCACGGGTTCGGGGTGGAGGTGGGGGCGGCGGAGTGGAGCATTTCGCCGTACGAGGGGAAGAAGAAGGTGGTGAGTGGGGAGAGGATAGAGAGTGCCGTGAAGAGGTTGATGGATGATGGAGAGAAAGGGAAGAGAATGAGAAGCAAGGCCAAAGAGATGCAGGAGAAGGCTTGGAAAGCTGTTCAAGAAGGTGGTTCTTCTTACGACAGTCTCACGGCTCTGATTCATCATTTCAAGACTCTTGTGCCTAATCATGTGAATGGGAATGGGAATATCGATCACTGA

>Glyma16g03760.2   sequence type=CDS   gene model=Glyma16g03760   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAAAGAGTAGCATCAGTATCTCGGCCACTGAAAATATACTTCCTCCCATTCTTCTCACCGGGGCACCTAATCCCTCTGGTCCAGCTGGCTCGCTTGGTGGCGGCACGAGGCCAGCACGTGACCATCATCACCACCCCCGCCAACGCTCAACTCTTCGACCAGAACATCGACAAGGACACCGCCTCCGGCCACCACATCCGCGTCCACATCATCAAGTTCCCCAACGCCCACGTAGGGCTACCGGAAGGCATCGAGCACCTCTCCGCCGCCACCAACAATGAAACCGCCTACAAGATCCACATGGCGGCGCATCTCATCATGCCCCAGCTCGAGTCTCTGGTCAAACACTCTCCACCGGACGTCTTCATCCCTGACATCCTCTTCACCTGGACCAAAGACTTCTCCCAGAAACTCTCCATCTCGCGGCTAGTCTTCAACCCTATTTCCATCTTCGACGTCTGCATGATCCACGCCATTAAAACCCACCCTGAAGCCTTCGCTTCCGACTCTGGGCCTTTTCTAATTCCTGATCTACCCCACCCTTTAACTCTCCCCGTCAAGCCTTCCCCCGGTTTCGCCGCCTTAACCGAATCTCTCCTCGACGGGGAACAGGACAGTCACGGCGTCATCGTAAACAGCTTCGCCGATCTCGACGCCGAGTACACTCAACACTACCAGAAACTTACAGGGCGCAAGGTGTGGCATGTTGGGCCAAGCTCCCTCATGGTGCAAAAGACGGTGAAAAGTAGTACTGTTGATGAGAGTAGACACGATTGTCTCACGTGGCTTGACTCAAAGAAAGAATCTTCGGTTCTCTACATTTGTTTCGGAAGCCTTTCTCTCATCTCCGACGAGCAGCTTTACCAGATTGCTACCGGACTCGAAGGGTCAGGGCATTGTTTTCTTTGGGTGGTGCATCGCAAAAACAAAGACGGAGAAGAAGGAGATTCTTCTTCTTCTTCCGGAAAGTGGTTGCCGGAAGGGTTTGAGGAAAAGATAGCTAAGGAGAACAGAGGCATGCTGATTAAGGGATGGGCGCCGCAGCCGTTGATCCTGAACCACCCTGCGGTGGGAGGATTTTTAACGCACTGCGGGTGGAACGCGGTGGCGGAGGCGATCAGCTCCGGGGTTCCGATGGTGACAATGCCGGCTTTCGGGGACCAGTACTATAACGAGAAGCTGATAACGGAGGTGCACGGGTTCGGGGTGGAGGTGGGGGCGGCGGAGTGGAGCATTTCGCCGTACGAGGGGAAGAAGAAGGTGGTGAGTGGGGAGAGGATAGAGAGTGCCGTGAAGAGAATGAGAAGCAAGGCCAAAGAGATGCAGGAGAAGGCTTGGAAAGCTGTTCAAGAAGGTGGTTCTTCTTACGACAGTCTCACGGCTCTGATTCATCATTTCAAGACTCTTGTGCCTAATCATGTGAATGGGAATGGGAATATCGATCACTGA

Predicted protein sequences of Glyma16g03760

Limit To All Plant Sequences

>Glyma16g03760.1   sequence type=predicted peptide   gene model=Glyma16g03760   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MERVASVSRPLKIYFLPFFSPGHLIPLVQLARLVAARGQHVTIITTPANAQLFDQNIDKDTASGHHIRVHIIKFPNAHVGLPEGIEHLSAATNNETAYKIHMAAHLIMPQLESLVKHSPPDVFIPDILFTWTKDFSQKLSISRLVFNPISIFDVCMIHAIKTHPEAFASDSGPFLIPDLPHPLTLPVKPSPGFAALTESLLDGEQDSHGVIVNSFADLDAEYTQHYQKLTGRKVWHVGPSSLMVQKTVKSSTVDESRHDCLTWLDSKKESSVLYICFGSLSLISDEQLYQIATGLEGSGHCFLWVVHRKNKDGEEGDSSSSSGKWLPEGFEEKIAKENRGMLIKGWAPQPLILNHPAVGGFLTHCGWNAVAEAISSGVPMVTMPAFGDQYYNEKLITEVHGFGVEVGAAEWSISPYEGKKKVVSGERIESAVKRLMDDGEKGKRMRSKAKEMQEKAWKAVQEGGSSYDSLTALIHHFKTLVPNHVNGNGNIDH*

>Glyma16g03760.2   sequence type=predicted peptide   gene model=Glyma16g03760   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MERVASVSRPLKIYFLPFFSPGHLIPLVQLARLVAARGQHVTIITTPANAQLFDQNIDKDTASGHHIRVHIIKFPNAHVGLPEGIEHLSAATNNETAYKIHMAAHLIMPQLESLVKHSPPDVFIPDILFTWTKDFSQKLSISRLVFNPISIFDVCMIHAIKTHPEAFASDSGPFLIPDLPHPLTLPVKPSPGFAALTESLLDGEQDSHGVIVNSFADLDAEYTQHYQKLTGRKVWHVGPSSLMVQKTVKSSTVDESRHDCLTWLDSKKESSVLYICFGSLSLISDEQLYQIATGLEGSGHCFLWVVHRKNKDGEEGDSSSSSGKWLPEGFEEKIAKENRGMLIKGWAPQPLILNHPAVGGFLTHCGWNAVAEAISSGVPMVTMPAFGDQYYNEKLITEVHGFGVEVGAAEWSISPYEGKKKVVSGERIESAVKRMRSKAKEMQEKAWKAVQEGGSSYDSLTALIHHFKTLVPNHVNGNGNIDH*

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