|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G53760 | AT | Annotation by Michelle Graham. TAIR10: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, plastid, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2343 (InterPro:IPR018786); Has 171 Blast hits to 171 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 127; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr1:20 | SoyBase | E_val: 1.00E-15 | ISS |
GO:0008150 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biological process | SoyBase | N/A | ISS |
GO:0005739 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion | SoyBase | N/A | ISS |
GO:0005774 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: vacuolar membrane | SoyBase | N/A | ISS |
GO:0009536 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plastid | SoyBase | N/A | ISS |
GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
GO:0003674 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: molecular function | SoyBase | N/A | ISS |
UniRef100_G7L9X4 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Kinesin-4 n=1 Tax=Medicago truncatula RepID=G7L9X4_MEDTR | SoyBase | E_val: 7.00E-24 | ISS |
UniRef100_I1KHK2 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KHK2_SOYBN | SoyBase | E_val: 4.00E-32 | ISS |
Glyma16g01745 not represented in the dataset |
Glyma16g01745 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.16g014900 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma16g01745.1 sequence type=CDS gene model=Glyma16g01745 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTCCCGTCCTTCTGGGGTTTTATTTAGCACTTATTCTCATTGGAGAGTCCTACAGGGGAGTGAGAAGCTGTTTCAGCTAGTCTCAGATAGCAGCAAGACTTCAAGTCAAAGCCATGAACTGTGTTGGGTGTTGAGGCCATCCAAAGAACTAGAGAATCTTGTCCGTCTAGAAGATGATCAAGATGATCTTAGTCAACATGCCATCGTAGACATTTGCAAGATCTATGACTTGAACACCAAAGATATTATAAAATAA
>Glyma16g01745.1 sequence type=predicted peptide gene model=Glyma16g01745 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSRPSGVLFSTYSHWRVLQGSEKLFQLVSDSSKTSSQSHELCWVLRPSKELENLVRLEDDQDDLSQHAIVDICKIYDLNTKDIIK*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||