Report for Sequence Feature Glyma15g40200
Feature Type: gene_model
Chromosome: Gm15
Start: 47204500
stop: 47205646
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma15g40200
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G78380 AT
Annotation by Michelle Graham. TAIR10: glutathione S-transferase TAU 19 | chr1:29486659-29487819 REVERSE LENGTH=219
SoyBase E_val: 1.00E-118 ISS
GO:0006094 GO-bp
Annotation by Michelle Graham. GO Biological Process: gluconeogenesis
SoyBase N/A ISS
GO:0006096 GO-bp
Annotation by Michelle Graham. GO Biological Process: glycolysis
SoyBase N/A ISS
GO:0006635 GO-bp
Annotation by Michelle Graham. GO Biological Process: fatty acid beta-oxidation
SoyBase N/A ISS
GO:0006979 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to oxidative stress
SoyBase N/A ISS
GO:0009407 GO-bp
Annotation by Michelle Graham. GO Biological Process: toxin catabolic process
SoyBase N/A ISS
GO:0009651 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to salt stress
SoyBase N/A ISS
GO:0010583 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to cyclopentenone
SoyBase N/A ISS
GO:0016036 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellular response to phosphate starvation
SoyBase N/A ISS
GO:0019375 GO-bp
Annotation by Michelle Graham. GO Biological Process: galactolipid biosynthetic process
SoyBase N/A ISS
GO:0042631 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellular response to water deprivation
SoyBase N/A ISS
GO:0043161 GO-bp
Annotation by Michelle Graham. GO Biological Process: proteasomal ubiquitin-dependent protein catabolic process
SoyBase N/A ISS
GO:0046686 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to cadmium ion
SoyBase N/A ISS
GO:0051788 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to misfolded protein
SoyBase N/A ISS
GO:0080129 GO-bp
Annotation by Michelle Graham. GO Biological Process: proteasome core complex assembly
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0005774 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: vacuolar membrane
SoyBase N/A ISS
GO:0005829 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytosol
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0009570 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast stroma
SoyBase N/A ISS
GO:0004364 GO-mf
Annotation by Michelle Graham. GO Molecular Function: glutathione transferase activity
SoyBase N/A ISS
GO:0043295 GO-mf
Annotation by Michelle Graham. GO Molecular Function: glutathione binding
SoyBase N/A ISS
KOG0406
KOG
Glutathione S-transferase
JGI ISS
PTHR11260 Panther
GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING
JGI ISS
PTHR11260:SF54 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00043 PFAM
Glutathione S-transferase, C-terminal domain
JGI ISS
PF02798 PFAM
Glutathione S-transferase, N-terminal domain
JGI ISS
UniRef100_I1MJ34 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MJ34_SOYBN
SoyBase E_val: 8.00E-159 ISS
UniRef100_O49235 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: 2,4-D inducible glutathione S-transferase n=1 Tax=Glycine max RepID=O49235_SOYBN
SoyBase E_val: 8.00E-158 ISS
Expression Patterns of Glyma15g40200
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma15g40200
Paralog Evidence Comments
Glyma08g18690 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma15g40200 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.15g251600 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma15g40200
Coding sequences of Glyma15g40200
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma15g40200.1 sequence type=CDS gene model=Glyma15g40200 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCAGATGAGGTGGTTCTGCTAGATTTCTGGCCAAGTCCATTTGGGATGAGGGTCAGGATTGCACTTGCTGAAAAGGGTATCAAATATGAGTACAAAGAAGAGGACTTGAGGAACAAGAGTCCTCTTCTCCTCCAAATGAACCCGGTTCACAAGAAGATTCCGGTTCTCATCCACAATGGCAAACCCATTTGTGAATCCCTCATTGCTGTTCAGTACATTGAGGAGGTTTGGAATGACAGAAATCCCTTGTTGCCTTCTGACCCTTACCAGAGAGCTCAGGCTAGATTCTGGGCTGATTATGTTGATAAGAAGATATATGATCTTGGAAGGAAGATTTGGACATCAAAAGGAGAAGAAAAAGAAGCTGCCAAGAAGGAGTTCATAGAAGCCCTTAAATTGTTGGAGGAACAGCTGGGAGACAAGACTTATTTTGGAGGAGACAATCTAGGTTTTGTGGATATAGCGCTTGTTCCATTCTACACTTGGTTCAAAGCCTATGAGACTTTTGGCACCCTCAACATAGAGAGTGAGTGCCCCAAGTTTATTGCTTGGGCCAAGAGGTGCCTTCAGAAAGAAAGCGTTGCCAAGTCTCTTCCTGATCAGCAAAAGGTTTATGAGTTCATTATGGATCTAAGAAAGAAGTTAGGCATTGAGTAG
Predicted protein sequences of Glyma15g40200
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma15g40200.1 sequence type=predicted peptide gene model=Glyma15g40200 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MADEVVLLDFWPSPFGMRVRIALAEKGIKYEYKEEDLRNKSPLLLQMNPVHKKIPVLIHNGKPICESLIAVQYIEEVWNDRNPLLPSDPYQRAQARFWADYVDKKIYDLGRKIWTSKGEEKEAAKKEFIEALKLLEEQLGDKTYFGGDNLGFVDIALVPFYTWFKAYETFGTLNIESECPKFIAWAKRCLQKESVAKSLPDQQKVYEFIMDLRKKLGIE*