Report for Sequence Feature Glyma15g40120
Feature Type: gene_model
Chromosome: Gm15
Start: 47075205
stop: 47076284
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma15g40120
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G13990 AT
Annotation by Michelle Graham. TAIR10: exocyst subunit exo70 family protein C2 | chr5:4514680-4516767 REVERSE LENGTH=695
SoyBase E_val: 9.00E-55 ISS
GO:0006887 GO-bp
Annotation by Michelle Graham. GO Biological Process: exocytosis
SoyBase N/A ISS
GO:0006904 GO-bp
Annotation by Michelle Graham. GO Biological Process: vesicle docking involved in exocytosis
SoyBase N/A ISS
GO:0009827 GO-bp
Annotation by Michelle Graham. GO Biological Process: plant-type cell wall modification
SoyBase N/A ISS
GO:0009860 GO-bp
Annotation by Michelle Graham. GO Biological Process: pollen tube growth
SoyBase N/A ISS
GO:0000145 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: exocyst
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0005829 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytosol
SoyBase N/A ISS
PTHR12542 Panther
EXOCYST COMPLEX PROTEIN EXO70-RELATED
JGI ISS
PTHR12542:SF7 Panther
EXOCYST COMPLEX PROTEIN EXO70
JGI ISS
PF03081 PFAM
Exo70 exocyst complex subunit
JGI ISS
UniRef100_B9S3S8 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9S3S8_RICCO
SoyBase E_val: 3.00E-59 ISS
UniRef100_I1JCY6 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1JCY6_SOYBN
SoyBase E_val: 4.00E-98 ISS
Expression Patterns of Glyma15g40120
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma15g40120 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.15g250700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma15g40120
Coding sequences of Glyma15g40120
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma15g40120.1 sequence type=CDS gene model=Glyma15g40120 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCTTACTAATAGAAAGAAACCAATAAAATGTAGTTTGCATAACCTTTTCCTTTCCAGAACAAGATTATATGTTCTTTATGATTTCGAGAGATCAGGTGAGAACAATTATCGGAAGATAATACTTGACCACGGTTCAGAAAAGAAATCAAGGTCTCCATTTAAAATTAGTCTGAAAATTCCTGCTTCGATTTTTAAAGGCAATAGGAAAAGTTTAAGGCTAGCGTGTGAATACAAAGACACTTTAGAAGAGGTGTTCAAAGAACACTCCAAAATGGAGCGTGCAAATTCAACAAGCAGGCCACACTACGAAGATTCCAAACCAAACAACAACAACAAACAAAAAGAAAATGTGTCACCTTTTGCGGCGCAGTTAATGAGGGTAATGGAGCTTCTGGACACAAATCTTGAAGGAAAAGCGAAGCTGTACAAAGAAGTACCACTAAGCCTCATATTTATGATGAGCAACAGAAGGTACATAGTTCAGAAGATAAAAGGCTCTACAGAGATCTACGAAGTGATGGGAGAAACGTGGTGTCGCAAGAGATCCATGGACCTGAGAACTTACCACAAGAACTACCAGGTTGAAACGTGGAGCAAGATTCTGAGTTCTCTTAGCCCTAAAGGTTTGAACGAGAACAGGAAGGTGCACAAGTTAGTGCTGAAGAAGCGGTTCAAGAGCTTCAACCTGACATTTGACTTGGGTGGAACGGAGAAAGAGGGTTTGAAAAGCCAGGATTCTTCTTAG
Predicted protein sequences of Glyma15g40120
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma15g40120.1 sequence type=predicted peptide gene model=Glyma15g40120 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MLTNRKKPIKCSLHNLFLSRTRLYVLYDFERSGENNYRKIILDHGSEKKSRSPFKISLKIPASIFKGNRKSLRLACEYKDTLEEVFKEHSKMERANSTSRPHYEDSKPNNNNKQKENVSPFAAQLMRVMELLDTNLEGKAKLYKEVPLSLIFMMSNRRYIVQKIKGSTEIYEVMGETWCRKRSMDLRTYHKNYQVETWSKILSSLSPKGLNENRKVHKLVLKKRFKSFNLTFDLGGTEKEGLKSQDSS*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
