|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G25880 | AT | Annotation by Michelle Graham. TAIR10: NADP-malic enzyme 3 | chr5:9024549-9028260 FORWARD LENGTH=588 | SoyBase | E_val: 1.00E-45 | ISS |
GO:0006094 | GO-bp | Annotation by Michelle Graham. GO Biological Process: gluconeogenesis | SoyBase | N/A | ISS |
GO:0006108 | GO-bp | Annotation by Michelle Graham. GO Biological Process: malate metabolic process | SoyBase | N/A | ISS |
GO:0006499 | GO-bp | Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation | SoyBase | N/A | ISS |
GO:0007010 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cytoskeleton organization | SoyBase | N/A | ISS |
GO:0009827 | GO-bp | Annotation by Michelle Graham. GO Biological Process: plant-type cell wall modification | SoyBase | N/A | ISS |
GO:0009860 | GO-bp | Annotation by Michelle Graham. GO Biological Process: pollen tube growth | SoyBase | N/A | ISS |
GO:0010498 | GO-bp | Annotation by Michelle Graham. GO Biological Process: proteasomal protein catabolic process | SoyBase | N/A | ISS |
GO:0051260 | GO-bp | Annotation by Michelle Graham. GO Biological Process: protein homooligomerization | SoyBase | N/A | ISS |
GO:0055114 | GO-bp | Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process | SoyBase | N/A | ISS |
GO:0005829 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytosol | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0000166 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: nucleotide binding | SoyBase | N/A | ISS |
GO:0004470 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: malic enzyme activity | SoyBase | N/A | ISS |
GO:0004473 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity | SoyBase | N/A | ISS |
GO:0016491 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity | SoyBase | N/A | ISS |
GO:0016616 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | SoyBase | N/A | ISS |
GO:0016652 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor | SoyBase | N/A | ISS |
GO:0046872 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: metal ion binding | SoyBase | N/A | ISS |
GO:0051287 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: NAD binding | SoyBase | N/A | ISS |
PTHR23406 | Panther | MALIC ENZYME-RELATED | JGI | ISS | |
PTHR23406:SF2 | Panther | MALIC ENZYME | JGI | ISS | |
PF03949 | PFAM | Malic enzyme, NAD binding domain | JGI | ISS | |
UniRef100_A6N1I8 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Malic enzyme (Fragment) n=1 Tax=Oryza sativa Indica Group RepID=A6N1I8_ORYSI | SoyBase | E_val: 7.00E-54 | ISS |
UniRef100_UPI000233F0FC | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233F0FC related cluster n=1 Tax=unknown RepID=UPI000233F0FC | SoyBase | E_val: 6.00E-60 | ISS |
Glyma15g38780 not represented in the dataset |
Glyma15g38780 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma15g38780.1 sequence type=CDS gene model=Glyma15g38780 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGCTCGGACAGCTGAAGTGGCAAGTCAATTTTTGTTTATTCATATGTGTTTGTGTTTGTTCCCTTATTCTTGTGTATCACCATCAGGGAAGTGCCATTTTTGCAAGTGGGAGCCCATTTCCTCCCGTTGAGTATGAGGGCAAAGTGTTTGTGCCTGGCCAGGCCAATAATGCATACATATTTCCTGGATTTGGTCTTGGTTTAATAATGTCTGGGACCACTCGAGTGCATGATGACCTGCTTTGGGCTGCCTCTGAGGCTTTGGCTGCACAAGTGAGCCAAGAGAACTTTGATAAGGGACTCATATACCCACCATTCACCAACATAAGAAAGATTTCAGCACACATAGCTGCCAATGTTGCTTCTAAGGCTTATGAGCTT
>Glyma15g38780.1 sequence type=predicted peptide gene model=Glyma15g38780 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MLGQLKWQVNFCLFICVCVCSLILVYHHQGSAIFASGSPFPPVEYEGKVFVPGQANNAYIFPGFGLGLIMSGTTRVHDDLLWAASEALAAQVSQENFDKGLIYPPFTNIRKISAHIAANVASKAYEL
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||