SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT5G07010 | AT | Annotation by Michelle Graham. TAIR10: sulfotransferase 2A | chr5:2174960-2176039 REVERSE LENGTH=359 | SoyBase | E_val: 2.00E-78 | ISS |
| GO:0009611 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to wounding | SoyBase | N/A | ISS |
| GO:0009694 | GO-bp | Annotation by Michelle Graham. GO Biological Process: jasmonic acid metabolic process | SoyBase | N/A | ISS |
| GO:0009695 | GO-bp | Annotation by Michelle Graham. GO Biological Process: jasmonic acid biosynthetic process | SoyBase | N/A | ISS |
| GO:0009753 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to jasmonic acid stimulus | SoyBase | N/A | ISS |
| GO:0009867 | GO-bp | Annotation by Michelle Graham. GO Biological Process: jasmonic acid mediated signaling pathway | SoyBase | N/A | ISS |
| GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
| GO:0008146 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: sulfotransferase activity | SoyBase | N/A | ISS |
| GO:0080131 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: hydroxyjasmonate sulfotransferase activity | SoyBase | N/A | ISS |
| KOG1584 | KOG | Sulfotransferase | JGI | ISS | |
| PTHR11783 | Panther | SULFOTRANSFERASE (SULT) | JGI | ISS | |
| PTHR11783:SF1 | Panther | SULFOTRANSFERASE-RELATED | JGI | ISS | |
| PF00685 | PFAM | Sulfotransferase domain | JGI | ISS | |
| UniRef100_G7IVU2 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Sulfotransferase n=1 Tax=Medicago truncatula RepID=G7IVU2_MEDTR | SoyBase | E_val: 2.00E-86 | ISS |
| UniRef100_UPI000233BB60 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233BB60 related cluster n=1 Tax=unknown RepID=UPI000233BB60 | SoyBase | E_val: 6.00E-166 | ISS |
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Glyma15g37890 not represented in the dataset |
Glyma15g37890 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.15g237100 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma15g37890.2 sequence type=CDS gene model=Glyma15g37890 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGCTTCAATTGGTGGTGGCCAACAACCAAATAAAGAAGAGAAGCTACTTCTATCCCTTCATAAAGAGAGGAGTTGGTCATCACCTTATGTTTATCTATTTCAAGAATTCTGGTGCCTATCAACTGTTATTCTTGTTACCAGCCTTCCAAAGTCAGGTACTACCTGGTTGAAATCCCTTATTTTCACAATTGTCAATCAACAATACTTCTCCCCCACCCATTACTTACTTCCAATCCCCATGACCTTTACTCACCTTCCATTCACTTCGTTACCCGACTCAATCATTGAGTCTATTTGTAGAAATCCATTTGACACTTTTGTTTCATCATGGACTTTCTTTAGTAGTATTAAGCAATCATCTTTACCTGCATTAACACTAGAGGAAGCATTCGAAATGTATTGCAATGGGATAATTGGGTTTGGTTCACGGTGGAGTCATATACCAAACAAAGTTCTTTTCTTAGAGTACGAGGATCATAAAGAGGATGTCAATCTTCAAGTGAAGAGAATTATAGAGTTTTTGGGTTGTCCTTTCACTCACGAGGAAGAAAATAATGGAGTTATTGAGAGCATAATCAAGTTATGTAGCTTTGAGAATACGAAGGATTTGGAAGTGAATAAATCTGGAAAACTAGGCAACATCATTGAGAATAAGAGCTTTTTTAGGAAGGCTGTAATAGGGAATTGGATGAATTACTTTTCCCCTTCTATGATAGAAAAATTATCCAAAATTGTTGAAGAAAAATTAAGTGGATCAGGTCTATCATTTAAAATGTATTCATAG
>Glyma15g37890.2 sequence type=predicted peptide gene model=Glyma15g37890 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MASIGGGQQPNKEEKLLLSLHKERSWSSPYVYLFQEFWCLSTVILVTSLPKSGTTWLKSLIFTIVNQQYFSPTHYLLPIPMTFTHLPFTSLPDSIIESICRNPFDTFVSSWTFFSSIKQSSLPALTLEEAFEMYCNGIIGFGSRWSHIPNKVLFLEYEDHKEDVNLQVKRIIEFLGCPFTHEEENNGVIESIIKLCSFENTKDLEVNKSGKLGNIIENKSFFRKAVIGNWMNYFSPSMIEKLSKIVEEKLSGSGLSFKMYS*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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