Report for Sequence Feature Glyma15g37410
Feature Type: gene_model
Chromosome: Gm15
Start: 43212420
stop: 43219243
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma15g37410
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G13530 AT
Annotation by Michelle Graham. TAIR10: protein kinases;ubiquitin-protein ligases | chr5:4345618-4354369 FORWARD LENGTH=1624
SoyBase E_val: 0 ISS
GO:0000956 GO-bp
Annotation by Michelle Graham. GO Biological Process: nuclear-transcribed mRNA catabolic process
SoyBase N/A ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0006952 GO-bp
Annotation by Michelle Graham. GO Biological Process: defense response
SoyBase N/A ISS
GO:0009737 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to abscisic acid stimulus
SoyBase N/A ISS
GO:0009738 GO-bp
Annotation by Michelle Graham. GO Biological Process: abscisic acid mediated signaling pathway
SoyBase N/A ISS
GO:0009788 GO-bp
Annotation by Michelle Graham. GO Biological Process: negative regulation of abscisic acid mediated signaling pathway
SoyBase N/A ISS
GO:0016567 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein ubiquitination
SoyBase N/A ISS
GO:0048589 GO-bp
Annotation by Michelle Graham. GO Biological Process: developmental growth
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0005769 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: early endosome
SoyBase N/A ISS
GO:0005802 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: trans-Golgi network
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0004842 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ubiquitin-protein ligase activity
SoyBase N/A ISS
GO:0005515 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein binding
SoyBase N/A ISS
GO:0043621 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein self-association
SoyBase N/A ISS
PTHR22967 Panther
SERINE/THREONINE PROTEIN KINASE
JGI ISS
PTHR22967:SF51 Panther
JGI ISS
PF00023 PFAM
Ankyrin repeat
JGI ISS
UniRef100_G7IYR0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: A subunit of NADH dehydrogenase n=1 Tax=Medicago truncatula RepID=G7IYR0_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1MIP5 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MIP5_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma15g37410
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma15g37410 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.15g233600 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma15g37410
Transcripts of Glyma15g37410
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma15g37410.3 sequence type=transcript gene model=Glyma15g37410 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
GTGGCAAGACTCTAGGTGACATCTTGGATGTCCTTCCCCGAGAATGGATATCAGAAGATATGATGGAGGCACTCATGAAGAAAGGAGTTTGTCTCTCTCCTACAATATTTGAATTGGGAGACTGGGTGAAGTTTAGAAAAACTTCCATAACTCCAACAAATGGGTGGGAAGGTGATCGGCAGAAGCAGGTTTGGTTGACCTGGGCAGTCTCGTGACAGCATTGGAACAGTATTATGTGTTGATGATGATCATCCGAGTTGGATTTCCTGGACAATCCAGAGGATGGAAAGCTGATCCAGAAGAGATGGAACGTGTTCAAGAATTCAAGATTGGAGATTGGGTTCGCATTCGTCCTTTTCTTACATCTACAAAGTACGGATTAGGATCTGTGACACTGGAAAGCATCGGCATTGTATATTGTATCAGACCAGATAGTAGTCTGTTAATAGAACTGAGTTATCTTCCAACCTCATGGCATTGTGAACCGGAAGAGGTTGAGCATGTAGTTCCTTTTAGGATTGGTGATCAGATATGCGTGAAGAGATCTGTTGCAGAACCTAGATATGCTTGGGGAGGTGAGACACATCATAGTGTTGGAAAAATAAGAGAGATTGAGGGTGATGGTCTCTTAATAATAGATATACCAAACCGAGTTGTTCCATGGCAAGCAGATCCATCAGACATGGAGAAGGTGGAAGATTTTAAGGATGGAAATTGGGTCAGAGTTAAAGCTTCAGTGTCTGCTCCAAGATATGGGTGGGAGGATGTTACAAGAAACAGTATTGGAGTAATTCATAACTTGGAGGAGGATGGCGATATGGGTATTGCCTTTTGCTTCAGGAATGAGCTTTTTCCTTTCTCAGTCACTGATGGTGAGAAAGTTCCACGTTTTGAGGTGGGGCAAGAAATTCGTGTGATGCCATCTGTTAACCAGCCACGGCTCGGATGGTTAAACGAATCACCCTCTACTTTTGGAAAAACAGCAAGAATTGATTTGGATGGTGCACTCAATGTAAGATTATGAATTTAATTTTTATTTTTTCTAAATTTTGCACAAGATATCTTACTTATAGTCACTTTTAACAAAGTTGAACCTAATACGGTTTTCAGTGTTGCTACTTGAGTTTTTTGTTTGGATAGAAAACTTATAAAACCATGTAGACATTTCCTAGGATTTAGCCTTCATCAGAGTACACTCTTGTGTG
Coding sequences of Glyma15g37410
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma15g37410.2 sequence type=CDS gene model=Glyma15g37410 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGACTGACGATGTTGAATTGGTTAAGGTTATTCTTGCTGCTGGTGTTGATGTGAACATTCGTAATGTGCACAATGGCATTCCTCTTCACATAGCCTTAGCTAGGGGTGCTAAGTCATGTGTTGAACTACTTCTATGTACTGGGGCAGATTGTAATTTGCAGGATGATGATGGTAACACTGCTCTCCATATAGCAGCAGAAACAGCAAAAATGATACGTGAAAATCTTGATTGGCTCATTGTATGCTTGGGAATCCTAATGCTGATTGGCAAGACTCTAGGTGACATCTTGGATGTCCTTCCCCGAGAATGGATATCAGAAGATATGATGGAGGCACTCATGAAGAAAGGAGTTTGTCTCTCTCCTACAATATTTGAATTGGGAGACTGGGTGAAGTTTAGAAAAACTTCCATAACTCCAACAAATGGGTGGGAAGGTGATCGGCAGAAGCAGGTGGGCTTTGTGCAGAGAGTTCCAGACAAAGATAATCTCATTGTTTCATTTTGTTCTGGAGAGTATTATAGTGTTTTGGCCAATGAAGTTGTAAAAGTCGTTCTATTAGACAGGGGACAACATGTGCAGCTTAAAGAGGATGTAAAAAAGCCAAGTCTCGTGACAGCATTGGAACAGTATTATGTGTTGATGATGATCATCCGAGTTGGATTTCCTGGACAATCCAGAGGATGGAAAGCTGATCCAGAAGAGATGGAACGTGTTCAAGAATTCAAGATTGGAGATTGGGTTCGCATTCGTCCTTTTCTTACATCTACAAAGTACGGATTAGGATCTGTGACACTGGAAAGCATCGGCATTGTATATTGTATCAGACCAGATAGTAGTCTGTTAATAGAACTGAGTTATCTTCCAACCTCATGGCATTGTGAACCGGAAGAGGTTGAGCATGTAGTTCCTTTTAGGATTGGTGATCAGATATGCGTGAAGAGATCTGTTGCAGAACCTAGATATGCTTGGGGAGGTGAGACACATCATAGTGTTGGAAAAATAAGAGAGATTGAGGGTGATGGTCTCTTAATAATAGATATACCAAACCGAGTTGTTCCATGGCAAGCAGATCCATCAGACATGGAGAAGGTGGAAGATTTTAAGGTGGATGGAAATTGGGTCAGAGTTAAAGCTTCAGTGTCTGCTCCAAGATATGGGTGGGAGGATGTTACAAGAAACAGTATTGGAGTAATTCATAACTTGGAGGAGGATGGCGATATGGGTATTGCCTTTTGCTTCAGGAATGAGCTTTTTCCTTTCTCAGTCACTGATGGTGAGAAAGTTCCACGTTTTGAGGTGGGGCAAGAAATTCGTGTGATGCCATCTGTTAACCAGCCACGGCTCGGATGGTTAAACGAATCACCCTCTACTTTTGGAAAAACAGCAAGAATTGATTTGGATGGTGCACTCAATGTAGGTAGGCAAAGCTTGTGGAAAGTTTCTCCTGGGGATGTGGAACAACTTCCAGGATTTGAAGTTGGTGATTGGGTTTGCTCAAAACCGAGCCCGGGAAGCAGATCAAGCAGTGACTTGAATGATGTTTATGTTGCCTTTTGTGGAGAGCAAGAAAGGTGGGTAGGACCTAGTTCCCATCTTGAAAGAGTTCACAAACTCTTTGTTGAACAGAAAGTTAGAGTAAAACTTAACATAAAGGAACCAAGATTTGGGTGGTCCGGGCACACCCATGCGAGCATTGGAACGATACAAGCCATCAATGCTGATGGAAAGCTTCGAATATACACGCCAGAGGGATCAAAAGCATGGATGTTGGACCCATCAGAAGTGGAGATGGTGGAAGAGAAGGGGTTCTGCATTGGAGATTGGGTTAAGGTTAGGCCATTTGAAGTGGGAGACAATGTTAGGATCAAAGATGGATTGGTGACCCCACGGTGGGGATGGGAAATGGTGACACATTCCAGTAAGGGAAGGGTGGTAGGAGTAGATGCAAATGGCAAGGTAAGAATAAAGTTTCAGTGGAGGGAAAGGGAGGCCTTGGGTAGGAGACCCTGCTGA
>Glyma15g37410.3 sequence type=CDS gene model=Glyma15g37410 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGATGATCATCCGAGTTGGATTTCCTGGACAATCCAGAGGATGGAAAGCTGATCCAGAAGAGATGGAACGTGTTCAAGAATTCAAGATTGGAGATTGGGTTCGCATTCGTCCTTTTCTTACATCTACAAAGTACGGATTAGGATCTGTGACACTGGAAAGCATCGGCATTGTATATTGTATCAGACCAGATAGTAGTCTGTTAATAGAACTGAGTTATCTTCCAACCTCATGGCATTGTGAACCGGAAGAGGTTGAGCATGTAGTTCCTTTTAGGATTGGTGATCAGATATGCGTGAAGAGATCTGTTGCAGAACCTAGATATGCTTGGGGAGGTGAGACACATCATAGTGTTGGAAAAATAAGAGAGATTGAGGGTGATGGTCTCTTAATAATAGATATACCAAACCGAGTTGTTCCATGGCAAGCAGATCCATCAGACATGGAGAAGGTGGAAGATTTTAAGGATGGAAATTGGGTCAGAGTTAAAGCTTCAGTGTCTGCTCCAAGATATGGGTGGGAGGATGTTACAAGAAACAGTATTGGAGTAATTCATAACTTGGAGGAGGATGGCGATATGGGTATTGCCTTTTGCTTCAGGAATGAGCTTTTTCCTTTCTCAGTCACTGATGGTGAGAAAGTTCCACGTTTTGAGGTGGGGCAAGAAATTCGTGTGATGCCATCTGTTAACCAGCCACGGCTCGGATGGTTAAACGAATCACCCTCTACTTTTGGAAAAACAGCAAGAATTGATTTGGATGGTGCACTCAATGTAAGATTATGA
Predicted protein sequences of Glyma15g37410
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma15g37410.2 sequence type=predicted peptide gene model=Glyma15g37410 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MTDDVELVKVILAAGVDVNIRNVHNGIPLHIALARGAKSCVELLLCTGADCNLQDDDGNTALHIAAETAKMIRENLDWLIVCLGILMLIGKTLGDILDVLPREWISEDMMEALMKKGVCLSPTIFELGDWVKFRKTSITPTNGWEGDRQKQVGFVQRVPDKDNLIVSFCSGEYYSVLANEVVKVVLLDRGQHVQLKEDVKKPSLVTALEQYYVLMMIIRVGFPGQSRGWKADPEEMERVQEFKIGDWVRIRPFLTSTKYGLGSVTLESIGIVYCIRPDSSLLIELSYLPTSWHCEPEEVEHVVPFRIGDQICVKRSVAEPRYAWGGETHHSVGKIREIEGDGLLIIDIPNRVVPWQADPSDMEKVEDFKVDGNWVRVKASVSAPRYGWEDVTRNSIGVIHNLEEDGDMGIAFCFRNELFPFSVTDGEKVPRFEVGQEIRVMPSVNQPRLGWLNESPSTFGKTARIDLDGALNVGRQSLWKVSPGDVEQLPGFEVGDWVCSKPSPGSRSSSDLNDVYVAFCGEQERWVGPSSHLERVHKLFVEQKVRVKLNIKEPRFGWSGHTHASIGTIQAINADGKLRIYTPEGSKAWMLDPSEVEMVEEKGFCIGDWVKVRPFEVGDNVRIKDGLVTPRWGWEMVTHSSKGRVVGVDANGKVRIKFQWREREALGRRPC*
>Glyma15g37410.3 sequence type=predicted peptide gene model=Glyma15g37410 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MMIIRVGFPGQSRGWKADPEEMERVQEFKIGDWVRIRPFLTSTKYGLGSVTLESIGIVYCIRPDSSLLIELSYLPTSWHCEPEEVEHVVPFRIGDQICVKRSVAEPRYAWGGETHHSVGKIREIEGDGLLIIDIPNRVVPWQADPSDMEKVEDFKDGNWVRVKASVSAPRYGWEDVTRNSIGVIHNLEEDGDMGIAFCFRNELFPFSVTDGEKVPRFEVGQEIRVMPSVNQPRLGWLNESPSTFGKTARIDLDGALNVRL*