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Report for Sequence Feature Glyma15g37390

Feature Type:gene_model
Chromosome:Gm15
Start:43164159
stop:43168071
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G14470AT Annotation by Michelle Graham. TAIR10: NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054 SoyBaseE_val: 3.00E-175ISS
GO:0006952GO-bp Annotation by Michelle Graham. GO Biological Process: defense response SoyBaseN/AISS
GO:0009627GO-bp Annotation by Michelle Graham. GO Biological Process: systemic acquired resistance SoyBaseN/AISS
GO:0009697GO-bp Annotation by Michelle Graham. GO Biological Process: salicylic acid biosynthetic process SoyBaseN/AISS
GO:0005576GO-cc Annotation by Michelle Graham. GO Cellular Compartment: extracellular region SoyBaseN/AISS
GO:0005515GO-mf Annotation by Michelle Graham. GO Molecular Function: protein binding SoyBaseN/AISS
GO:0043531GO-mf Annotation by Michelle Graham. GO Molecular Function: ADP binding SoyBaseN/AISS
KOG4658 KOG Apoptotic ATPase JGI ISS
PTHR23155Panther LEUCINE-RICH REPEAT-CONTAINING PROTEIN JGI ISS
PTHR23155:SF121Panther SUBFAMILY NOT NAMED JGI ISS
PF00560PFAM Leucine Rich Repeat JGI ISS
PF00931PFAM NB-ARC domain JGI ISS
UniRef100_Q8GZF0UniRef Annotation by Michelle Graham. Most informative UniRef hit: Resistance protein KR4 n=1 Tax=Glycine max RepID=Q8GZF0_SOYBN SoyBaseE_val: 0ISS
UniRef100_UPI000233B9FBUniRef Annotation by Michelle Graham. Best UniRef hit: UPI000233B9FB related cluster n=1 Tax=unknown RepID=UPI000233B9FB SoyBaseE_val: 0ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.15g233400 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma15g37390.1   sequence type=CDS   gene model=Glyma15g37390   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCATTAGAATGCGTTGGTGGTGCTGTTCTTTCTTCTATCCTCGGTGCTCTATTTCAGAAGCTAGCTTCTCCTCAAGTTCTGGATTTCTTTCGTGGAACAAAGATCGATCAGAAGCTGCGGAAGGACTTGGAAAACAAGCTCCTCTCCATCCAAGCTGTGCTTGATGATGCTGAAAAAAAACAGTTTGGAAATATGCAAGTGAGAGACTGGCTTATTAAGCTCAAAGTTGCCATGCTTGACGTTGAAGATGTCTTGGATGAAATACAACACTCCAGACTCCAAGTTCAACCTCAATCTGAATCTCAAACCTGTACTTGCAAGGTACCCAATTTCTTCAAATCTTCCCCTGTTACTTCCTTTAACAAGGAAATTAATTCCAGCATGAAAAATGTCCTTGATGACCTAGATGATCTTGCAAGCCGGATGGATAATCTAGGTTTGAAAAAGCCTAGTGATCTTGTAGTTGGATCAGGATCTGGTGGTAAAGTGCCACAATCAACATCTTTGGTGGTAGAAAGTGATATTTGTGGCAGAGATGGTGATAAAGAAATCATCATTAACTGGCTCACTTCTAACACTGATAACAAGCTGTCAATACTTACTATCGTGGGCATGGGCGGGTTGGGTAAGACCACGCTTGCCCAACTTGTATACAATGACCCAAGAATAGTGAGTAAGTTTGATGTCAAAGCTTGGATCTGTGTTTCAGAGGAATTTGATGTTTTCAACGTATCAAGAGCAATTCTTGACACGATTACTGATTCGACTGATCATGGTAGAGAGCTAGAAATAGTTCAGAGAAGACTAAAAGAAAATTTGGCAGATAAAAAATTTCTCCTCGTTTTGGATGACGTTTGGAACGAAAGCAGGCCTAAATGGGAAGCTGTGCAGAATGCTCTTGTTTGTGGAGCTCAGGGAAGTAGGATCCTTGTCACAACACGCAGTGAGGAAGTTGCTTCTACCATGCGGTCAGAAAAACACAGGCTGGGGCAATTACAAGAAGATTATTGCTGGCAATTGTTCGCTAAACATGCATTCAGAGATGATAATCTTCCACGAGATCCAGTATGCTCAGATATTGGTATGAAGATTCTTAAAAAATGTAAAAGACTTCCTCTGGCCTTGAAGTCAATGGGAAGTCTATTACACAACAAACCAGCCTGGGAATGGGAAAGCGTATTGAAAAGCGAAATATGGGAATTAAAGGACAGTGATATTGTTCCTGCTTTAGCATTGAGCTATCACCACCTTCCTCCCCATCTCAAGACATGCTTTGCTTACTGTGCTTTATTCCCCAAGGATTATGTGTTTGACAAGGAGTGTTTAATTCAGTTGTGGATGGCTGAAAATTTCCTAAACTGCCATCAATGCAGTACGAGTCCTGAGGAAGTTGGCCAACAGTACTTCAATGATCTACTATCAAGGTTGAGAGTTGATCAAGCAAAATGTACACAGAAAACAACCCGTCATTTTTCGGTTTCAATGATTACCGAACGATATTTTGATGAGTTTGGAACTTCATGTGATACTAAAAAATTGCGTACATTTATGCCAACAAGGCGGAGAATGAATGAAGATCACTGGAGTTGGAATTGCAATATGTTGATACATGAATTGTTCTCCAAGTTTAAGTTCTTACGTGTCTTATCTCTGTCTCATTGTTTAGACATTAAAGAGCTGCCTGACTCTGTTTGCAATTTTAAACATCTTCGTTCGTTAGACCTTTCCCATACTGGCATTAAAAAACTACCTGAATCCACATGTTCACTCTACAACTTGCAAATACTGAAGCTGAATTATTGTAGATGTTTGAAGGAGCTGCCCTCAAATTTGCATGAACTCACCAATTTGCATCGCCTTGAATTTGTAAATACTGAAATTATAAAGGTGCCACCGCATCTGGGAAAGTTGAAGAATCTTCAAGTATCCATGAGTTCTTTTAATGTTGGCAAACGTAGTGAGTTCACCATTCAGAAATTCGGAGAGCTCAATCTTCTTCACGAAATATTATCATTTAGGGAGCTGCAGAATATTGAGAATCCCTCAGATGCATTAGCTGCAGATTTGAAAAATAAAACACGCCTTGTGGAACTAGAGTTTAAATGGAATTTGCACCGGAACCCTGATGATTCTGCCAAAGAAAGGGATGTAATTGTAATTGAGAATCTACAACCTTCCAAACACTTAGAGAAGTTGTCAATCAGGAACTATGGTGGTAAACAATTCCCAAATTGGTTATCCGATAATTCTTTATCAAATGTGGTGTCCTTAGAGTTGAACAACTGTCAATCTTGCCAACATTTGCCTTCCCTTGGACTTTTGCCATTTCTCAAGAACCTTGGGATTTCAAGTCTTGATGGGATAGTGAGCATTGGTGCTGATTTTCATGGTAATAGCTCCTCTTCATTTCCATCGTTGGAAAGATTGAAGTTCTACGATATGGAAGCATGGGAAAAATGGGAATGTGAAGCTGTGACAGGTGCTTTTCCATGTCTTCAATATCTTGATATAAGCAAATGTCCCAAGCTGAAAGGTGACCTCCCAGAGCAACTTCTTCCTTTAAGGAGGCTAGGAATTAGAAAGTGCAAACAACTTGAGGCTTCAGCTCCCAGGGCTCTAGAACTAGAACTACAAGACTTTGGAAAGCTGCAACTTGACTGGGCTACTTTGAAAAAGCTCAGCATGGGCGGACACAGCATGGAAGCATTGTTGCTGGAAAAGTCTGATACTTTGGAAGAACTGGAAATTTTTTGTTGCCCTCTGCTATCTGAAATGTTTGTAATATTTTGCAATTGTAGAATGAGGGATTATGGCTGTGACTCTCTAAAGACTTTTCCGCTAGATTTCTTCCCAACACTCAGGACCCTTCATCTTAGTGGCTTTCGTAATCTACGGATGATTACACAGGATCACACCCATAATCATCTCGAATTTCTGAAAATCAGAAAGTGCCCTCAATTAGAATCACTGCCTGGAAGCATGCATATGCAGCTTCCATCTCTGAAGGAGCTACGAATAGATGATTGTCCTAGAGTTGAGTCGTTCCCTGAAGGAGGTTTGCCATCAAATCTAAAAGAGATGCGACTCTATAAATGCTCGTCCGGACTCATGGCGTCACTGAAAGGGGCTTTGGGAGACAATCCCTCTCTGGAAACCTTGTCGATAAGAGAGCAGGATGCGGAATCTTTTCCTGATGAAGGTTTGCTGCCACTCTCTCTTACTTGTCTAACCATCAGTGGTTTTCGAAATCTAAAAAAACTGGACTACAAGGGGCTCTGTCAGCTCTCCTCTCTCAAGAAATTGATTCTTGAAAACTGTCCCAACCTCCAACAGCTACCAGAGGAGGGTCTTCCCGGATCCATTTCATATTTTACAATTGGTTATTCCTGCCCCAAACTCAAGCAGCGTTGCCAGAACCCAGGAGGCGAAGACTGGCCAAAGATTGCTCACATTCCAACCCTGCATATTAGTACAGGGTGA

>Glyma15g37390.1   sequence type=predicted peptide   gene model=Glyma15g37390   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MALECVGGAVLSSILGALFQKLASPQVLDFFRGTKIDQKLRKDLENKLLSIQAVLDDAEKKQFGNMQVRDWLIKLKVAMLDVEDVLDEIQHSRLQVQPQSESQTCTCKVPNFFKSSPVTSFNKEINSSMKNVLDDLDDLASRMDNLGLKKPSDLVVGSGSGGKVPQSTSLVVESDICGRDGDKEIIINWLTSNTDNKLSILTIVGMGGLGKTTLAQLVYNDPRIVSKFDVKAWICVSEEFDVFNVSRAILDTITDSTDHGRELEIVQRRLKENLADKKFLLVLDDVWNESRPKWEAVQNALVCGAQGSRILVTTRSEEVASTMRSEKHRLGQLQEDYCWQLFAKHAFRDDNLPRDPVCSDIGMKILKKCKRLPLALKSMGSLLHNKPAWEWESVLKSEIWELKDSDIVPALALSYHHLPPHLKTCFAYCALFPKDYVFDKECLIQLWMAENFLNCHQCSTSPEEVGQQYFNDLLSRLRVDQAKCTQKTTRHFSVSMITERYFDEFGTSCDTKKLRTFMPTRRRMNEDHWSWNCNMLIHELFSKFKFLRVLSLSHCLDIKELPDSVCNFKHLRSLDLSHTGIKKLPESTCSLYNLQILKLNYCRCLKELPSNLHELTNLHRLEFVNTEIIKVPPHLGKLKNLQVSMSSFNVGKRSEFTIQKFGELNLLHEILSFRELQNIENPSDALAADLKNKTRLVELEFKWNLHRNPDDSAKERDVIVIENLQPSKHLEKLSIRNYGGKQFPNWLSDNSLSNVVSLELNNCQSCQHLPSLGLLPFLKNLGISSLDGIVSIGADFHGNSSSSFPSLERLKFYDMEAWEKWECEAVTGAFPCLQYLDISKCPKLKGDLPEQLLPLRRLGIRKCKQLEASAPRALELELQDFGKLQLDWATLKKLSMGGHSMEALLLEKSDTLEELEIFCCPLLSEMFVIFCNCRMRDYGCDSLKTFPLDFFPTLRTLHLSGFRNLRMITQDHTHNHLEFLKIRKCPQLESLPGSMHMQLPSLKELRIDDCPRVESFPEGGLPSNLKEMRLYKCSSGLMASLKGALGDNPSLETLSIREQDAESFPDEGLLPLSLTCLTISGFRNLKKLDYKGLCQLSSLKKLILENCPNLQQLPEEGLPGSISYFTIGYSCPKLKQRCQNPGGEDWPKIAHIPTLHISTG*







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