Glyma15g37255 - SoyBase

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Report for Sequence Feature Glyma15g37255

Feature Type:	gene_model
Chromosome:	Gm15
Start:	42935968
stop:	42940494
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma15g37255

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G41540	AT	Annotation by Michelle Graham. TAIR10: Disease resistance protein (TIR-NBS-LRR class) family \| chr5:16612659-16616063 REVERSE LENGTH=1038	SoyBase	E_val: 2.00E-40	ISS
GO:0006952	GO-bp	Annotation by Michelle Graham. GO Biological Process: defense response	SoyBase	N/A	ISS
GO:0007165	GO-bp	Annotation by Michelle Graham. GO Biological Process: signal transduction	SoyBase	N/A	ISS
GO:0005622	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: intracellular	SoyBase	N/A	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0000166	GO-mf	Annotation by Michelle Graham. GO Molecular Function: nucleotide binding	SoyBase	N/A	ISS
GO:0017111	GO-mf	Annotation by Michelle Graham. GO Molecular Function: nucleoside-triphosphatase activity	SoyBase	N/A	ISS
GO:0043531	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ADP binding	SoyBase	N/A	ISS
PTHR11017	Panther	LEUCINE RICH REPEAT PROTEIN	JGI		ISS
PTHR11017:SF20	Panther	DISEASE RESISTANCE PROTEIN	JGI		ISS
PF00931	PFAM	NB-ARC domain	JGI		ISS
PF01582	PFAM	TIR domain	JGI		ISS
UniRef100_G7LGT8	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Resistance protein n=1 Tax=Medicago truncatula RepID=G7LGT8_MEDTR	SoyBase	E_val: 6.00E-140	ISS
UniRef100_I1M0S0	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M0S0_SOYBN	SoyBase	E_val: 3.00E-142	ISS

Expression Patterns of Glyma15g37255

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma15g37255 not represented in the dataset	Glyma15g37255 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma15g37255 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.15g232400	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma15g37255

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma15g37255

Limit To All Plant Sequences

>Glyma15g37255.2   sequence type=transcript   gene model=Glyma15g37255   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GCTGGAAGTTGACTTGTAGTAGACGAAGTCATCTACCTACATCTATTTTGGTGTCCAGTATCCGACCACATCCATAATATTTACAGTGTCCAACAAAGTCATCATCATCATCATCATGCAAAACCTTAGTCGCATGGACAAGCCAAAAACCATCACACACTACGTGTTGATAAGCTCCGCTGACGATACTGTCGCTGGTTTTACGAGCACTCTCGCCAAGTCCCTGGAAGATCAGGGATTCCCGGCGAGAGTGCTCGTGGACCACCGCGACCTGAAGAAAGCAGAGATTGAGACAGTGAGGGTGTTCATCGTTGTGTTGTCCGAACACTATGCAATTTGTCCGTTTCGGTTGGATAAGCTGGCCGAGATCGTGGATGGGTTAGGTGCCCGGCAGCGGGTTCTCCCGGTGTTCTACTATGTGCCCACGTCTGATGTGCGGTATCAGACTGGTAGCTATGAAGTAGCATTGGGTGTTCATGAGTACTATGTTGAACGTGAGAGGTTGGAGAAATGGAAGAACACTTTGGAAAAAGTTGCTGGCTTTGGCGGCTGGCCCCTCCAACGGACTGGGAAGACATATGAATACCAGTATATCGAGGAGATTGGTAGGAAGGTCTCTGAACATGTTGCTTGCTCTGTTGAACTGCATTCTCGAGTGCAGAAAGTTAATGAACTTCTGTATTCTGAATCTGATGATGGTGGAGTCAAGATGGTTGGGATATGTGGAGAAGATGGAACAGGTAAAACAACAGTAGCTTGTGGAGTTTATTACTCCAATGCTGCTGGAAACAGGTTTGACTATTTTTGCTTTCTTGATAAGGTTGGAGAATGTTTAAGGAATCATGGATTTATAGGTCTCATAGGTATGCTTCTCTCTGGAATGATTGGTGACAGCAACAACAACAGTGATATCATGAAATTTGGAAATACAAACAAAGGAATGTCAATATTAAAGCGAAAATTCTTCGAAGAAGAAAAGAAACTTTTTTTAGTTCTTGAAGACATTTATGATGAAAAGCAATTGCAAGACATTGTTAGGCTAACTAACTGCTTTAGTTCTAACAGCAAAGTCGTCATTACAACTAAGGACAACTCTTTGCTACACCGTCATGAGATTAGATTGTACGAGGTAGAGAGGTTCAAAACAAAAGATGCTTTTCAATTGCTTAGTTTGAAAGCTTTTAATTCTAAGAATTTGAAATCTATGTATTTGAGCATTTTAGAACGAGCAGAAACTTATGCTTCAGGGAATCCATTCATTCTAGAAGTGATGGGTTCCTACTTGCGCGGAAAAAGCATAGAGGAATGTGTATCTGCATTAGATCAATATGAAAAAGTTCCAAATAAAGAGAAACAAAGGATAGTTCAAATAAGCTTTGATGCTTTGGAGAAATGTCATCAGAAGATGTTGTCTTGCATTGCCTTTTACCTCAATAGACAAGATTTGCAAGTGGTTGAAGAAAAACTTTATAGGCAGTTTCGTGTCAGTCCAAAAGATGGTATTAAAGTGTTGCTTGATAAATCTCTTATAAAGATTAATGAGCATGGTCGGGTGATAATGCATGACTTGACACAAAACATGGTTAAAGATAATGGTGACATTACAACTTGACACAGAACATGGTTGGAGATAATGCCTAAACCATAATATCATTTCAAACAAGGTGTTACAATTGTTTGGAGAAAAAACTGAGCATGTCAAGCAATTGAAGCAAGAAATCCAACCTGCCTCGAATGATGGAAGCATTTCAACAGATGGAATTGGGAGAAAGTACGGAGTATGGCATACAAGAAATCCAGCCTGCCTCAAATGATTGAAGCATGATTTCAATTTGGTGGAATTAATTGGAACAAAATACAGTAGGAACTATATGGATGAATTGCTTTTTCATCATTCATCTTGATATATTTCCTGTAATGTTGTAAGTCTGTAAAAGTGATTTTTATTTACTTAAGTTAGTTTGTTTGTATACAATGGAATAGGAGTGTGGCATGCAAGAAATACAACCTGCAGCCTCAAATGATGGAAGAATGATTTATAATCCTATGGAATTTGAATATCAATTGTCATAATAAAACTGTTCTTCCTCCTCTTCTCAAGATCCTTCATGATATTGTCTAAAATTTGTTTCCCTTTTTCCAAGGTAAATATTCCGAATGGTGGCATATGACTCTAAGGACTTGTTTCACTGGCATAAAGACGTATTGAGCAGAGAAGCAATTTGCTTTTGTAATCACTGGCCATTGTTTTATATGCATTGCACATTTGATTTGTATGTGACCGCATGGCTATGTTGGAGGGGGGAAGTAATTGTACATCTTTGCCCATGTTTCCATGTATTTGTGGTGTCCGAATTTGTCACATCTTGTGCCAAATTTGCCTTTTAATAATAGAACTTTCATTTGCTTAGCAAAAAATAAATTGCACATTTGATTAATATGGTTTCTGGCAGCACTGTGTGAGCAATGGACAGCTCCAAATTTCCAAAGATGAAATGGATTTGGGCAGAACCTCCTCTGGTAAGCATTGGAGGCTGGGGCAGTCATCAAGAAACAAATTCTTGAAAGAAGATAGGTGGCAAAGACCCTTCTAGTCCAGTCTTTTAACATTTGGACAATCACTGATTTCCAGAGAAATAAGAGCTTGTGGCAGTAAATCTTCCTCAGGAAGATACTCCACATCCAGTCTTCCAATAAATAAGAATTCTAGAGAGGGATTGGCTCCCCAGGCGCTTTTCAGTGAGGCGATAAGTTTCAAGCAATTACAAAGAGACATGTTTTAAATTTGATGGCAAACCTCCTTCTAATGATTCAACTTTTGGAATTTGGACAATCATCTATAAATAAGTAATAAAAAGATTGAAGGAGGATATGCATGTGTTCAGGCAATGATTCAAATTGAGGGCACTCTCTGATTCAAATTGGGGCATTCCTTTATACAAAGATGTTGAAGACATGAAAAAAACCTGTCACAGCCTGGCATTCCCATTTTTCCCATTCTTCCATTTGGCAGAACTCCAGTGTTTCTAAGGATGTTAATGAAGAAGAGTTATTCCCATAAAATTCTGCATCAATAAGCAATATCCCATTAAGTCCATCAATCCTCAGGTACTTGAGACATGACAAAAGTCCAAGGGGAGGCAAACGTTGCCAAGATTGACAGTTCTCCATGGTTAAGGACACCACATTCAATAATGAATTATTGAATAATCACCTTGGAAAGTGTTTGGAAGGATGTAGATTCTCAGTTAAAATTTCATCCCTTTCTATTGTTGAATCATCAAGATTTTCAAGGTCCTCAAGCACTTGTTCCATACTTGATTTAATTTCCTTGTTAAAGGAACTAACAAGAGAAGATTTGAAGAAATTTGGTACCTTGCAAGTGCAGCCAGTGCAGGTTTGAGATTCAGCTTCAGCTTCAACTTGGCATTTGGAGATTTCATATTGTATTTCATCCAAGAGATCCTCTGTGTCAAGTACAGCATCTTTGACCTTAAGAAGCCAGTTTCTGAGATGTGGATCTCTGAACTGCTTTAGTTTTGCATCATCAGCCAAAACCTGGATGGAGTTCAGCTTGATTTCCAAGTTGTTGAGCAGCTTTTGATCAAGCTTTCTTCCACGAAAGAAGTCCAGGATTTGAGGAGAAGCAAGTTTCTCAAATGCAACCCGAAGGAAAGCAGAAAGAAGAGCACCACCTACCAATTATAGTGCCATGGTAGGAAAATTAGTAGAGTGGTGAATTAAAATGATTAATTTGAAGTGCAGGGTTAATATTCTGATGAAATGAGTAGTAATAAGCTAGTTTATGAATGGTGATCTTTTTCTTTGATGCTCAGTCAACCAATAACTGTTGAGTCTTTCCAATAACACAAACTTCAACAATTGTATTGTGTGGTGTGTGTCACCTTTATTT

Coding sequences of Glyma15g37255

Limit To All Plant Sequences

>Glyma15g37255.1   sequence type=CDS   gene model=Glyma15g37255   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCAAAACCTTAGTCGCATGGACAAGCCAAAAACCATCACACACTACGTGTTGATAAGCTCCGCTGACGATACTGTCGCTGGTTTTACGAGCACTCTCGCCAAGTCCCTGGAAGATCAGGGATTCCCGGCGAGAGTGCTCGTGGACCACCGCGACCTGAAGAAAGCAGAGATTGAGACAGTGAGGGTGTTCATCGTTGTGTTGTCCGAACACTATGCAATTTGTCCGTTTCGGTTGGATAAGCTGGCCGAGATCGTGGATGGGTTAGGTGCCCGGCAGCGGGTTCTCCCGGTGTTCTACTATGTGCCCACGTCTGATGTGCGGTATCAGACTGGTAGCTATGAAGTAGCATTGGGTGTTCATGAGTACTATGTTGAACGTGAGAGGTTGGAGAAATGGAAGAACACTTTGGAAAAAGTTGCTGGCTTTGGCGGCTGGCCCCTCCAACGGACTGGGAAGACATATGAATACCAGTATATCGAGGAGATTGGTAGGAAGGTCTCTGAACATGTTGCTTGCTCTGTTGAACTGCATTCTCGAGTGCAGAAAGTTAATGAACTTCTGTATTCTGAATCTGATGATGGTGGAGTCAAGATGGTTGGGATATGTGGAGAAGATGGAACAGGTAAAACAACAGTAGCTTGTGGAGTTTATTACTCCAATGCTGCTGGAAACAGGTTTGACTATTTTTGCTTTCTTGATAAGGTTGGAGAATGTTTAAGGAATCATGGATTTATAGGTCTCATAGGTATGCTTCTCTCTGGAATGATTGGTGACAGCAACAACAACAGTGATATCATGAAATTTGGAAATACAAACAAAGGAATGTCAATATTAAAGCGAAAATTCTTCGAAGAAGAAAAGAAACTTTTTTTAGTTCTTGAAGACATTTATGATGAAAAGCAATTGCAAGACATTGTTAGGCTAACTAACTGCTTTAGTTCTAACAGCAAAGTCGTCATTACAACTAAGGACAACTCTTTGCTACACCGTCATGAGATTAGATTGTACGAGGTAGAGAGGTTCAAAACAAAAGATGCTTTTCAATTGCTTAGTTTGAAAGCTTTTAATTCTAAGAATTTGAAATCTATGTATTTGAGCATTTTAGAACGAGCAGAAACTTATGCTTCAGGGAATCCATTCATTCTAGAAGTGATGGGTTCCTACTTGCGCGGAAAAAGCATAGAGGAATGTGTATCTGCATTAGATCAATATGAAAAAGTTCCAAATAAAGAGAAACAAAGGATAGTTCAAATAAGCTTTGATGCTTTGGAGAAATGTCATCAGAAGATGTTGTCTTGCATTGCCTTTTACCTCAATAGACAAGATTTGCAAGTGGTTGAAGAAAAACTTTATAGGCAGTTTCGTGTCAGTCCAAAAGATGGTATTAAAGTGTTGCTTGATAAATCTCTTATAAAGATTAATGAGCATGGTCGGGTGATAATGCATGACTTGACACAAAACATGGTTAAAGATAATGGTGACATTACAACTTGA

>Glyma15g37255.2   sequence type=CDS   gene model=Glyma15g37255   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCAAAACCTTAGTCGCATGGACAAGCCAAAAACCATCACACACTACGTGTTGATAAGCTCCGCTGACGATACTGTCGCTGGTTTTACGAGCACTCTCGCCAAGTCCCTGGAAGATCAGGGATTCCCGGCGAGAGTGCTCGTGGACCACCGCGACCTGAAGAAAGCAGAGATTGAGACAGTGAGGGTGTTCATCGTTGTGTTGTCCGAACACTATGCAATTTGTCCGTTTCGGTTGGATAAGCTGGCCGAGATCGTGGATGGGTTAGGTGCCCGGCAGCGGGTTCTCCCGGTGTTCTACTATGTGCCCACGTCTGATGTGCGGTATCAGACTGGTAGCTATGAAGTAGCATTGGGTGTTCATGAGTACTATGTTGAACGTGAGAGGTTGGAGAAATGGAAGAACACTTTGGAAAAAGTTGCTGGCTTTGGCGGCTGGCCCCTCCAACGGACTGGGAAGACATATGAATACCAGTATATCGAGGAGATTGGTAGGAAGGTCTCTGAACATGTTGCTTGCTCTGTTGAACTGCATTCTCGAGTGCAGAAAGTTAATGAACTTCTGTATTCTGAATCTGATGATGGTGGAGTCAAGATGGTTGGGATATGTGGAGAAGATGGAACAGGTAAAACAACAGTAGCTTGTGGAGTTTATTACTCCAATGCTGCTGGAAACAGGTTTGACTATTTTTGCTTTCTTGATAAGGTTGGAGAATGTTTAAGGAATCATGGATTTATAGGTCTCATAGGTATGCTTCTCTCTGGAATGATTGGTGACAGCAACAACAACAGTGATATCATGAAATTTGGAAATACAAACAAAGGAATGTCAATATTAAAGCGAAAATTCTTCGAAGAAGAAAAGAAACTTTTTTTAGTTCTTGAAGACATTTATGATGAAAAGCAATTGCAAGACATTGTTAGGCTAACTAACTGCTTTAGTTCTAACAGCAAAGTCGTCATTACAACTAAGGACAACTCTTTGCTACACCGTCATGAGATTAGATTGTACGAGGTAGAGAGGTTCAAAACAAAAGATGCTTTTCAATTGCTTAGTTTGAAAGCTTTTAATTCTAAGAATTTGAAATCTATGTATTTGAGCATTTTAGAACGAGCAGAAACTTATGCTTCAGGGAATCCATTCATTCTAGAAGTGATGGGTTCCTACTTGCGCGGAAAAAGCATAGAGGAATGTGTATCTGCATTAGATCAATATGAAAAAGTTCCAAATAAAGAGAAACAAAGGATAGTTCAAATAAGCTTTGATGCTTTGGAGAAATGTCATCAGAAGATGTTGTCTTGCATTGCCTTTTACCTCAATAGACAAGATTTGCAAGTGGTTGAAGAAAAACTTTATAGGCAGTTTCGTGTCAGTCCAAAAGATGGTATTAAAGTGTTGCTTGATAAATCTCTTATAAAGATTAATGAGCATGGTCGGGTGATAATGCATGACTTGACACAAAACATGGTTAAAGATAATGGTGACATTACAACTTGA

Predicted protein sequences of Glyma15g37255

Limit To All Plant Sequences

>Glyma15g37255.1   sequence type=predicted peptide   gene model=Glyma15g37255   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MQNLSRMDKPKTITHYVLISSADDTVAGFTSTLAKSLEDQGFPARVLVDHRDLKKAEIETVRVFIVVLSEHYAICPFRLDKLAEIVDGLGARQRVLPVFYYVPTSDVRYQTGSYEVALGVHEYYVERERLEKWKNTLEKVAGFGGWPLQRTGKTYEYQYIEEIGRKVSEHVACSVELHSRVQKVNELLYSESDDGGVKMVGICGEDGTGKTTVACGVYYSNAAGNRFDYFCFLDKVGECLRNHGFIGLIGMLLSGMIGDSNNNSDIMKFGNTNKGMSILKRKFFEEEKKLFLVLEDIYDEKQLQDIVRLTNCFSSNSKVVITTKDNSLLHRHEIRLYEVERFKTKDAFQLLSLKAFNSKNLKSMYLSILERAETYASGNPFILEVMGSYLRGKSIEECVSALDQYEKVPNKEKQRIVQISFDALEKCHQKMLSCIAFYLNRQDLQVVEEKLYRQFRVSPKDGIKVLLDKSLIKINEHGRVIMHDLTQNMVKDNGDITT*

>Glyma15g37255.2   sequence type=predicted peptide   gene model=Glyma15g37255   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MQNLSRMDKPKTITHYVLISSADDTVAGFTSTLAKSLEDQGFPARVLVDHRDLKKAEIETVRVFIVVLSEHYAICPFRLDKLAEIVDGLGARQRVLPVFYYVPTSDVRYQTGSYEVALGVHEYYVERERLEKWKNTLEKVAGFGGWPLQRTGKTYEYQYIEEIGRKVSEHVACSVELHSRVQKVNELLYSESDDGGVKMVGICGEDGTGKTTVACGVYYSNAAGNRFDYFCFLDKVGECLRNHGFIGLIGMLLSGMIGDSNNNSDIMKFGNTNKGMSILKRKFFEEEKKLFLVLEDIYDEKQLQDIVRLTNCFSSNSKVVITTKDNSLLHRHEIRLYEVERFKTKDAFQLLSLKAFNSKNLKSMYLSILERAETYASGNPFILEVMGSYLRGKSIEECVSALDQYEKVPNKEKQRIVQISFDALEKCHQKMLSCIAFYLNRQDLQVVEEKLYRQFRVSPKDGIKVLLDKSLIKINEHGRVIMHDLTQNMVKDNGDITT*

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