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Report for Sequence Feature Glyma15g36830

Feature Type:gene_model
Chromosome:Gm15
Start:42294667
stop:42298029
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma15g36830
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G12400AT Annotation by Michelle Graham. TAIR10: stress-inducible protein, putative | chr4:7338866-7341239 REVERSE LENGTH=558 SoyBaseE_val: 2.00E-41ISS
GO:0006457GO-bp Annotation by Michelle Graham. GO Biological Process: protein folding SoyBaseN/AISS
GO:0009408GO-bp Annotation by Michelle Graham. GO Biological Process: response to heat SoyBaseN/AISS
GO:0009644GO-bp Annotation by Michelle Graham. GO Biological Process: response to high light intensity SoyBaseN/AISS
GO:0010286GO-bp Annotation by Michelle Graham. GO Biological Process: heat acclimation SoyBaseN/AISS
GO:0034976GO-bp Annotation by Michelle Graham. GO Biological Process: response to endoplasmic reticulum stress SoyBaseN/AISS
GO:0042542GO-bp Annotation by Michelle Graham. GO Biological Process: response to hydrogen peroxide SoyBaseN/AISS
PTHR22904Panther CHAPERONE BINDING PROTEIN JGI ISS
PTHR22904:SF14Panther STRESS-INDUCED-PHOSPHOPROTEIN 1 (STI1) (HSC70/HSP9 JGI ISS
PF00515PFAM Tetratricopeptide repeat JGI ISS
UniRef100_B9DG66UniRef Annotation by Michelle Graham. Most informative UniRef hit: AT4G12400 protein n=1 Tax=Arabidopsis thaliana RepID=B9DG66_ARATH SoyBaseE_val: 9.00E-39ISS
UniRef100_I1MUX1UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MUX1_SOYBN SoyBaseE_val: 3.00E-43ISS

Expression Patterns of Glyma15g36830
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma15g36830 not represented in the dataset
Glyma15g36830 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma15g36830 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma15g36830
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma15g36830
>Glyma15g36830.1   sequence type=CDS   gene model=Glyma15g36830   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCGAACACCGATGAACCCAATCTCATAAACTTCTCCTCCGTTGGTGAACCCTCGAAGGTTCTCATGGACAAGGTTGGGATTAAACGGAGAGTATCTATTGACAAAACCAAAAAGGAGGTTGACAACACTACCTTGATAGAGAATCTTCCTCTTGTCTCATGTTCTGCAGCATCAGATCAGGTTGATGTGCCGAAGCAATCTCAAAAGAAAGAAGAGCCGGAGCCACCTCAACATCAGAATTTCATTGTTAATGAACCCAAAAGGGTTCAAATTTCCCGGATTGTTTTGGACTGTTTTAATCTCTACGCTGCACTTACAGAGAACCGCAACACAGACACCTTGAAGAAACTGAACGAAGCTGAAAAGGCTAAGAAAGAACTAGAGCAACAACAATTAATGCAAATCCTGATCATGAAAGAATATGACAAAGCTTTGGAAACATACAGGGAGGGTTTGAAACATGATCCTAACAATGAGGACTTGCTTGATGGCATAAGAAGATGTTTAGAACAAATTAATAAGGCTATCCATGGAGATTTTACACCTGAGGAGTTAAAGGAGAGACAGGTATTGATTGATTTCCAGGAAAATCCCAGAGCTGCAGAGGAACATGCGAAGAATCCAATGGTGATGAACAAGATTCAAAAGCTTATCAGTGCCGAGATTGTGCAGATGAGATGA
Predicted protein sequences of Glyma15g36830
>Glyma15g36830.1   sequence type=predicted peptide   gene model=Glyma15g36830   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MANTDEPNLINFSSVGEPSKVLMDKVGIKRRVSIDKTKKEVDNTTLIENLPLVSCSAASDQVDVPKQSQKKEEPEPPQHQNFIVNEPKRVQISRIVLDCFNLYAALTENRNTDTLKKLNEAEKAKKELEQQQLMQILIMKEYDKALETYREGLKHDPNNEDLLDGIRRCLEQINKAIHGDFTPEELKERQVLIDFQENPRAAEEHAKNPMVMNKIQKLISAEIVQMR*






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