Report for Sequence Feature Glyma15g36740
Feature Type: gene_model
Chromosome: Gm15
Start: 42230176
stop: 42231614
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma15g36740
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G06990 AT
Annotation by Michelle Graham. TAIR10: Protein of unknown function, DUF617 | chr5:2169699-2170484 FORWARD LENGTH=261
SoyBase E_val: 1.00E-93 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
PF04759 PFAM
Protein of unknown function, DUF617
JGI ISS
UniRef100_I1MIL7 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=2 Tax=Glycine max RepID=I1MIL7_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q9FL47 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Expressed protein n=1 Tax=Arabidopsis thaliana RepID=Q9FL47_ARATH
SoyBase E_val: 6.00E-91 ISS
Expression Patterns of Glyma15g36740
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma15g36740 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.15g229300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma15g36740
Coding sequences of Glyma15g36740
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma15g36740.1 sequence type=CDS gene model=Glyma15g36740 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCATCATCCCTGCAACCGCCATTGCCACCACCACCACCGCCTCCATCACCACCACCATTATTATATAAAGAAGACTCACCAGCTACTACCGCTGCCGCCTCTCCAGTCCTCCGTGTACCAATCTCACTTCAACCGGCAAACACCAAGAGCAAGCGCGACTCCAAGTCCAACAAACTCTTCCGAAGGTTCCGATCGGTTTTCCGGTCATTTCCTATCATCATGCCATCATGCAAGATGCCAACAATGAATATTGGAAACCGCGGGAATGAGGTATACATCCATGGCGGCATGAGGATCACCGGAACCCTATTCGGGCACCGGAAAGCAAGGATCAACCTTGCTTTCCAAGAAAACCCCAACTGTCAGCCATTCCTGCTATTGGAGTTGGCCATCCCTACGGGAAAGCTGCTCCAAGACATGGGAATGGGGCTTAATAGAATCGCTTTGGAGTGCGAAAAGCCCTCCAACAACGACAAGATTAGGATCATTGATGAACCCATTTGGAGTTTGTTTTGCAATGGGAAGAAAATGGGATATGGGGTGAAGAGAGAGGCTACGGATGATGACTTGAACGTGATGCAATTGTTGCATGCAGTGTCTGTGGCAATTGGTGTTCTTCCCAACGAGATGTCAGACCCTCATGATGGTGAACTCTCGTACATGAGGGTGTATTTTGAACGTGTGGTTGGGTCCAAAGATTCCGAGACTTATTACATGATGATGCCTGATGGGAACAATAATGGACCTGAGCTCAGTGTGTTCTTCGTGAGGGTTTGA
Predicted protein sequences of Glyma15g36740
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma15g36740.1 sequence type=predicted peptide gene model=Glyma15g36740 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MASSLQPPLPPPPPPPSPPPLLYKEDSPATTAAASPVLRVPISLQPANTKSKRDSKSNKLFRRFRSVFRSFPIIMPSCKMPTMNIGNRGNEVYIHGGMRITGTLFGHRKARINLAFQENPNCQPFLLLELAIPTGKLLQDMGMGLNRIALECEKPSNNDKIRIIDEPIWSLFCNGKKMGYGVKREATDDDLNVMQLLHAVSVAIGVLPNEMSDPHDGELSYMRVYFERVVGSKDSETYYMMMPDGNNNGPELSVFFVRV*